mRNA_P-wetherbeei_contig11923.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: UPI001FF05FC8 (PA0069 family radical SAM protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FF05FC8) HSP 1 Score: 406 bits (1044), Expect = 1.810e-139 Identity = 211/278 (75.90%), Postives = 234/278 (84.17%), Query Frame = 1 Query: 1 MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 M T+++ RP S TG +LT+LPQ RGRGAR+N RY++N F DDGW+SLA++P LKT IF EQPKTII+RN SPDISFDRSINPYRGCEHGCVYCYARP+HAYMGLSPGLDFESKLFIKPNAAALLREELTA NY+P IALG+NTDPYQPIER YRITRQ++EVL EFNHP GIVTKSA VLRDLD+L MAE+GLVKVAISVTTLD LAR+MEPRASTP KR+ AL +LS AGIPTVVMIGPVIP +ND EIE ILKAA AGVKE Sbjct: 1 MATILEMRPG-SGTGIGTGGAKLTSLPQLERGRGARSNPAPRYDQNTAEFVDDGWQSLAEVPRLKTEIFTEQPKTIISRNTSPDISFDRSINPYRGCEHGCVYCYARPSHAYMGLSPGLDFESKLFIKPNAAALLREELTATNYKPAVIALGANTDPYQPIERDYRITRQVIEVLREFNHPFGIVTKSANVLRDLDLLQPMAEKGLVKVAISVTTLDPALARSMEPRASTPMKRMAALELLSKAGIPTVVMIGPVIPGLNDSEIENILKAARNAGVKE 277
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A6G6WVW2_9HYPH (PA0069 family radical SAM protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WVW2_9HYPH) HSP 1 Score: 402 bits (1033), Expect = 8.800e-138 Identity = 203/278 (73.02%), Postives = 226/278 (81.29%), Query Frame = 1 Query: 1 MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 M TLID R + D + GAGR LPQ RGRGA N GRYE++G + FDDGW++L DLPPLKTT++EE PK II N SPDISF +SINPYRGCEHGC YCYARPTHAYMGLSPGLDFESKLF K NAAALLR EL+ P+Y P TIALG+NTDPYQPIER YRITRQILEVLSEFNHPVGIVTKSALVLRDLDILT MA R LVKVA+SVTTLD KLARAMEPRA+TP +RL A+ LS AG+PTVVM P+IP +ND EIE++LKA AG +E Sbjct: 1 MTTLIDRRQTSGLDLSALGAGRYATLPQHQRGRGAVVNMPGRYERHGTALFDDGWQTLEDLPPLKTTVYEETPKKIITTNDSPDISFRQSINPYRGCEHGCSYCYARPTHAYMGLSPGLDFESKLFAKTNAAALLRAELSNPHYEPLTIALGANTDPYQPIEREYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTDMARRNLVKVAVSVTTLDAKLARAMEPRAATPTRRLGAIEALSKAGVPTVVMTAPIIPGLNDSEIESLLKAGHAAGARE 278
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A2W2APT8_9HYPH (Radical SAM protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2APT8_9HYPH) HSP 1 Score: 390 bits (1002), Expect = 4.500e-133 Identity = 198/278 (71.22%), Postives = 225/278 (80.94%), Query Frame = 1 Query: 1 MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 M TLID R +++ DPA G GR+TAL Q RGRGA N GR+E S FDDGW+ L DLP KTT+FEE+PK+II RN SPD+ FD+SINPYRGCEHGC YCYARP HAYMGLSPGLDFESKLF KP AA LLR EL A Y PRTIALG+NTD YQP+ER RITR +LEV++EFNHPVGIVTKSALV RD+DIL MA++GLVKVA+SVT+LD +LARAMEPRA+TPAKRL A+ LSAAGIPTVVM+ P+IPAVND EIEAIL AA AG +E Sbjct: 1 MSTLIDRRRALAPDPAALGEGRMTALSSQARGRGAGVNMSGRFEAYTRSLFDDGWQGLEDLPAFKTTVFEEKPKSIITRNDSPDVGFDQSINPYRGCEHGCSYCYARPAHAYMGLSPGLDFESKLFAKPEAAKLLRAELLAKGYVPRTIALGANTDAYQPVERERRITRALLEVMAEFNHPVGIVTKSALVTRDIDILAPMAKKGLVKVAVSVTSLDARLARAMEPRAATPAKRLAAIEQLSAAGIPTVVMVAPIIPAVNDAEIEAILAAAKTAGAQE 278
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A7Y2BNQ7_9HYPH (PA0069 family radical SAM protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BNQ7_9HYPH) HSP 1 Score: 379 bits (972), Expect = 1.510e-128 Identity = 195/278 (70.14%), Postives = 223/278 (80.22%), Query Frame = 1 Query: 1 MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 M T++D R + F +V + R RGAR+N GR+EK+ F DDGW++LAD+P L+T + EE KTIIARNQSPDISFDRSINPYRGCEHGC YCYARPTHA MGLSPGLDFE+KLF KPNAA LLR EL P Y+P TIALG+NTDPYQPIER YRITRQ+LEVLSEF+HPVGIVTKSA VLRDLDIL MAE+GLVKVA+SVTTLD KLARAMEPRASTPAKRL+A+ +L+ AG+P VM+ PVIPA+ND EIE IL AA+VAG E Sbjct: 1 MTTVLDKRARLDF--SVQDGPQSAVAAANARRRGARSNQSGRHEKHRYHFIDDGWQNLADVPALETHVSEETAKTIIARNQSPDISFDRSINPYRGCEHGCSYCYARPTHANMGLSPGLDFETKLFAKPNAAELLRAELLNPKYKPATIALGTNTDPYQPIERRYRITRQVLEVLSEFDHPVGIVTKSATVLRDLDILQPMAEKGLVKVALSVTTLDAKLARAMEPRASTPAKRLQAIELLAKAGVPAAVMVAPVIPALNDHEIEPILGAASVAGATE 276
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: UPI0010CA1CB1 (PA0069 family radical SAM protein n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010CA1CB1) HSP 1 Score: 373 bits (958), Expect = 1.760e-126 Identity = 187/252 (74.21%), Postives = 214/252 (84.92%), Query Frame = 1 Query: 70 TALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAG 825 TALP Q RGRGAR+N+ GR+E+ F DDGW++ +LP L+T++ EE+PK+II RN SPDISFD+SINPY+GCEHGC YCYARPTHAY GLSPGLDFE+KLF K NAA LLR EL+ P Y P+ IALG+NTDPYQP+ER YRITRQILEVL+EFNHPVGIVTKSALVLRDLDIL MA R LV+VAISVT+LD KL+R+MEPRASTP KRLEAL VLSAAG+ T VM+ PVIP+VND EIEAIL AAA AG Sbjct: 18 TALPGQTRGRGARSNESGRFERLSRLFADDGWQAFEELPKLRTSVIEEKPKSIITRNDSPDISFDQSINPYQGCEHGCAYCYARPTHAYWGLSPGLDFETKLFAKTNAAELLRRELSDPRYVPKMIALGANTDPYQPVERQYRITRQILEVLAEFNHPVGIVTKSALVLRDLDILQPMAARNLVRVAISVTSLDAKLSRSMEPRASTPRKRLEALEVLSAAGVSTTVMVAPVIPSVNDHEIEAILAAAAAAG 269
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A4R3MEK5_9HYPH (DNA repair photolyase n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3MEK5_9HYPH) HSP 1 Score: 371 bits (953), Expect = 1.280e-125 Identity = 186/265 (70.19%), Postives = 217/265 (81.89%), Query Frame = 1 Query: 43 PAVTGAGRLTAL-PQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 P A TA+ P + RGRGA +N GRYE+ FDDGW SL +LPP +TT+ +E+PK II RNQSPDISFDRSINPYRGCEHGC YC+ARPTHAYMGLSPGLDFES+LF KPNAA LL EL P YRPRTIA+G+NTDPYQP+ER +RITRQ+LEVL+ NHPVGIVTKSAL++RD+DIL+ MAERGLVKVA+SVTTLD +LARAMEPRA+TP++RLE + L+ AGIPT VM+ PVIP +ND EIEAIL AAA AG +E Sbjct: 15 PCPDPAALATAVAPDRRRGRGAISNVSGRYERLTRQIFDDGWTSLDELPPFRTTVTQERPKRIITRNQSPDISFDRSINPYRGCEHGCSYCFARPTHAYMGLSPGLDFESRLFAKPNAAELLERELADPGYRPRTIAMGTNTDPYQPVERQWRITRQVLEVLARHNHPVGIVTKSALIVRDIDILSHMAERGLVKVALSVTTLDRRLARAMEPRAATPSRRLETIMRLAEAGIPTAVMVAPVIPGLNDQEIEAILAAAAAAGARE 279
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A7S8C2E0_9HYPH (PA0069 family radical SAM protein n=2 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C2E0_9HYPH) HSP 1 Score: 369 bits (948), Expect = 7.320e-125 Identity = 193/278 (69.42%), Postives = 219/278 (78.78%), Query Frame = 1 Query: 1 MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 M TLID+RPS A ++ P RGRGAR+N GRYE+ FDDGW +L + L T++ EE+PKTII RN SPDI FDRSINPYRGCEHGC YCYARP+HAYMGLSPGLDFES+LF KPNA LLR EL+ P Y PRTIALG+NTDPYQPIER YRITR ILEVL+E +HPVGIVTKSALV RD+DIL MAE+GL KVA+SVTTLD L+RAMEPRASTPA+RL AL +L+ AGIPT VM+ PVIPA+ND EIEAILKAA+ AGV E Sbjct: 11 MTTLIDHRPS---------APQVPPPPGHERGRGARSNASGRYEREARLIFDDGWGTLEEETRLSTSVTEERPKTIITRNSSPDIGFDRSINPYRGCEHGCSYCYARPSHAYMGLSPGLDFESRLFAKPNAPELLRRELSDPKYTPRTIALGTNTDPYQPIERQYRITRGILEVLAELDHPVGIVTKSALVTRDIDILGPMAEKGLAKVALSVTTLDPSLSRAMEPRASTPARRLRALEMLNNAGIPTAVMVAPVIPALNDREIEAILKAASAAGVGE 279
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: A0A848Y386_9HYPH (PA0069 family radical SAM protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848Y386_9HYPH) HSP 1 Score: 366 bits (939), Expect = 1.540e-123 Identity = 187/261 (71.65%), Postives = 211/261 (80.84%), Query Frame = 1 Query: 55 GAGRL-TALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 GAG TA + RGRGAR N GR+E N FDDGW++L D P LKT +FEEQPK +I RN SPD+ FD SINPYRGCEHGC YCYARP HAY+GLSPGLDFESKLF KPNAA +LR EL AP Y+P I LG NTD YQPIER YRITRQILE+L EF +PVGIVTKSALVLRDLDIL +MAE+ LV VAISVT+LDG LAR MEPRA+TP KR++AL VL+A+GIPT VM+ PV+PA+ND EIEAILKAA+ AGVKE Sbjct: 16 GAGEAPTATRKMARGRGARTNVSGRFESNKRLLFDDGWQTLDDQPALKTEVFEEQPKGMINRNSSPDLGFDLSINPYRGCEHGCSYCYARPAHAYVGLSPGLDFESKLFAKPNAAEVLRRELLAPGYKPSLIVLGGNTDAYQPIERRYRITRQILELLLEFKNPVGIVTKSALVLRDLDILQAMAEKDLVNVAISVTSLDGALARKMEPRAATPMKRMQALEVLTASGIPTTVMVAPVVPAINDSEIEAILKAASAAGVKE 276
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: UPI0009EA8DAD (PA0069 family radical SAM protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=UPI0009EA8DAD) HSP 1 Score: 367 bits (941), Expect = 1.700e-123 Identity = 184/262 (70.23%), Postives = 212/262 (80.92%), Query Frame = 1 Query: 49 VTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 +TG + ++ RGRGA +N GRYE + FDDGW SL +LPP KTT+ + + II RNQSPDI FDRSINPYRGCEHGCVYC+ARPTHAY+GLSPGLDFESKLF+KP+AAALL +EL APNY PRTIA+G+NTDPYQPIER Y++ R+ILE L + HPVGIVTKSALV RDLDIL MAER L KVA+SVTTLD +LAR MEPRASTP +RLEALR LS AG+PT VM+ PVIPA+NDMEIE IL AAA AGV+E Sbjct: 39 LTGLLGVVVEHERRRGRGAHSNASGRYETHARIAFDDGWRSLEELPPFKTTVQVDSTRKIITRNQSPDIGFDRSINPYRGCEHGCVYCFARPTHAYLGLSPGLDFESKLFVKPDAAALLEKELAAPNYSPRTIAIGTNTDPYQPIERRYKVMRRILETLDKAGHPVGIVTKSALVTRDLDILARMAERNLAKVALSVTTLDPELARTMEPRASTPMRRLEALRQLSQAGVPTTVMVAPVIPALNDMEIERILDAAAAAGVRE 300
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Match: F8BU82_AFIC5 (Radical SAM domain protein n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=F8BU82_AFIC5) HSP 1 Score: 364 bits (934), Expect = 1.450e-122 Identity = 184/251 (73.31%), Postives = 209/251 (83.27%), Query Frame = 1 Query: 82 QQMRGRGARNNDKGRYEKNGISFFDDGWESLADLPPLKTTIFEEQPKTIIARNQSPDISFDRSINPYRGCEHGCVYCYARPTHAYMGLSPGLDFESKLFIKPNAAALLREELTAPNYRPRTIALGSNTDPYQPIERTYRITRQILEVLSEFNHPVGIVTKSALVLRDLDILTSMAERGLVKVAISVTTLDGKLARAMEPRASTPAKRLEALRVLSAAGIPTVVMIGPVIPAVNDMEIEAILKAAAVAGVKE 834 ++ RGRGA+ N GRYE+ + FDDGW+SL DLPP KTTI + + +I+RN SPDI FDRSINPYRGCEHGCVYC+ARPTHAY+GLSPGLDFESKLF+KP+A LL +ELTAP Y PRTIA+G+NTDPYQPIER +RI R ILEVL + HPVGIVTKSALV RD+DIL MAE+ L KVAISVT+LD KLARAMEPRASTP KRLEALR LSAAGIPTVVM P+IPA+ND EIE IL AAA AGV+E Sbjct: 41 ERRRGRGAQTNASGRYEREARAAFDDGWQSLDDLPPFKTTIALDTARKVISRNDSPDIGFDRSINPYRGCEHGCVYCFARPTHAYLGLSPGLDFESKLFVKPDAPMLLEKELTAPGYEPRTIAIGTNTDPYQPIEREHRIMRGILEVLEKAGHPVGIVTKSALVTRDIDILARMAEKSLAKVAISVTSLDPKLARAMEPRASTPPKRLEALRQLSAAGIPTVVMTAPIIPALNDSEIERILDAAAHAGVRE 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11923.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11923.3.1 >prot_P-wetherbeei_contig11923.3.1 ID=prot_P-wetherbeei_contig11923.3.1|Name=mRNA_P-wetherbeei_contig11923.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp MPTLIDNRPSISFDPAVTGAGRLTALPQQMRGRGARNNDKGRYEKNGISFback to top mRNA from alignment at P-wetherbeei_contig11923:1235..2068+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11923.3.1 ID=mRNA_P-wetherbeei_contig11923.3.1|Name=mRNA_P-wetherbeei_contig11923.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig11923:1235..2068+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11923:1235..2068+ >mRNA_P-wetherbeei_contig11923.3.1 ID=mRNA_P-wetherbeei_contig11923.3.1|Name=mRNA_P-wetherbeei_contig11923.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig11923:1235..2068+ (Phaeothamnion wetherbeei SAG_119_79)back to top |