mRNA_P-wetherbeei_contig11889.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA) HSP 1 Score: 254 bits (648), Expect = 5.220e-80 Identity = 146/274 (53.28%), Postives = 174/274 (63.50%), Query Frame = 1 Query: 37 MPYRWAEPLPPFRSCLSELTEAE----PAASGL--PELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL-RDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGG---GISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 MPYRWAEPLPPF +CL++ P++ GL + VLRGAL GD V ++SWLTS+FID+V+ +FA Y FMPIEFAA+ L R G R DMAA DILG+ +DYA KP + L ++N HW LLRVQ PVPELQLFEP+GKPAKR G G+S RYIPK VF WL+ M G W RS SA+TRQQQ TGFDCGVASLLYAEKCGQ Q+REDID TTQ D+T YR++L+ + SL Sbjct: 1 MPYRWAEPLPPFVTCLNQPAPLRLLRSPSSGGLVATDGVLRGALYGDSVDDESWLTSSFIDMVLAQFAACYRGAHFMPIEFAAFRLARMG--RADMAACTDILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRAHGAHSSEGVSYRYIPKDVFVWLDTMCARG----------------------------GGWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSL 244
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA) HSP 1 Score: 231 bits (589), Expect = 3.730e-71 Identity = 131/273 (47.99%), Postives = 167/273 (61.17%), Query Frame = 1 Query: 7 VVFLKLPRCKMPYRWAEPLPPFRSCLSEL--TEAEPAASGLPEL---VLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807 VV ++L RCKMPYRW EPLPPF S L+ + + A L VLR ALS DEV ++SWL+S+FID+V+ ++AR Y + FMP+EFAA+ L+ T DM A DILG+ +DY KP V L I N HW L RVQ P+ ELQLFEPMGKPA R G +S RYIPK + WL+ ++PLG + + W+ RS SA+T Q Q TGFDCGVA +LYAEKC QG ++EDID+ T Q D T +R+ L+ Sbjct: 70 VVTVRLARCKMPYRWREPLPPFVSILNHVGALHLDSDARRLDHATVTVLRRALSSDEVQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLKTMQT-VDMFQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG----VSLRYIPKHIIHWLDTVWPLGSEAES-------------------------WLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQ 312
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE) HSP 1 Score: 236 bits (603), Expect = 6.380e-70 Identity = 142/341 (41.64%), Postives = 180/341 (52.79%), Query Frame = 1 Query: 4 NVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPA---ASGLPELV--------LRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRD---GSTREDMAAA----------------------------------RDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGG------------------GGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 NVV +KL R +MP RWA P PPF++CL ++ A+ A G + G GD V ++WL+S FID+VM KFARTY++ FMPI+FA L T AAA +D+LGRP+ Y+E +P + L + N HW LLRV+ DPVPELQLFEPMGKP +R G GG R IPK+V+RWL+A++PL G + S W R++SA+TRQQQ TGFDCGVASLLYAEKCGQGQ+REDID +TTQ D+T YRR L+ Y E + Sbjct: 251 NVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAANADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEV 591
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.120e-66 Identity = 138/362 (38.12%), Postives = 179/362 (49.45%), Query Frame = 1 Query: 4 NVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPA---ASG-------------LPELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLR-----------------------------------------------------DGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGG------------------GGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 NVV +KL R +MP RWA P PPF +CL ++ A+ ASG + G GD V ++WL+S FID+VM KFARTY++ FMPI+FA L + + + +D+LGRP+ Y+E +P + L + N HW LLRV+ DPVPELQLFEPMGKP +R G GG R IPK+V+RWL+A++PL G + S W R++SA+TRQQQ TGFDCGVASLLYAEKCGQGQ+RED+D +TTQ D+T YRR L+ Y E + Sbjct: 233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 594
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.170e-66 Identity = 125/282 (44.33%), Postives = 169/282 (59.93%), Query Frame = 1 Query: 7 VVFLKLPRCKMPYRWAEPLPPFRSCLSEL------TEA--EPAASGLPELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAAARDILGRPVDYAEGKPFVL-PFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 VV ++L RCKMPYRW EPLPPF S LSE +EA + A+ + E VL +++GDEV ++SWL+S+FID+V+ +FA+TY S FMPIEF+ + L+ + DM A D++G+ +DY KP + I N HW +LRVQ P+ ELQLFEPMGKPA R G +S R IP+ + WL+ +PL E + G W+ ++ SA+T Q Q FDCGVA LLYAEKC QG ++EDI T Q D+T +R+ L+ SL Sbjct: 73 VVTVRLARCKMPYRWREPLPPFVSILSETELFDQWSEAPDDTGAACISESVLHRSMNGDEVKDESWLSSSFIDLVLSRFAKTYRSMHFMPIEFSEFRLKT-MQKSDMLQATDLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNG----VSYRNIPQHIIHWLDTCWPLDEGHPKDSGG-------------------RSWIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQRCLRSL 330
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA) HSP 1 Score: 151 bits (382), Expect = 7.350e-41 Identity = 89/245 (36.33%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 133 VLRGALSG--DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAA-----------ARDILGRPVDYAEGKPFVLPFIQNN-HWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 +L+ A S D + + SWLTS +D+++ + A Y F+P +F L S RD+LGR VDY +P + HW L RVQL P PELQLFEPMG+P+ R G +S RY+P+ V WL A YP W+ R+ SA+T QQ +GFDCGVA LLYA+KCGQGQ R++ID T Q +T +R L+ +++ Sbjct: 46 LLQSAFSSEDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEGRSRSRSQHGRKRGPSDCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRPSSRSG----LSHRYVPRSVVEWLEACYP----------------------------QHPSWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAM 258
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A484E1F7_BRELC (ULP_PROTEASE domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1F7_BRELC) HSP 1 Score: 150 bits (379), Expect = 3.940e-40 Identity = 90/243 (37.04%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 133 VLRGALSGDE-VAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL----------------RDGSTREDMAAARDILGRPVDYAEGKPFVLPF-IQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807 +L+ A+ ++ V E +W+T ID+V+ KFA++Y++ F+P F L R ++ D RD+LGR VDY KP V + HW L RVQL P P+LQLFEPMGK A R G IS R +P+ V WLN YP + W++R+ SA+ +QQ +GFDCGVA LLYA+KCG+GQ E+I++ Q +T +R+ LR Sbjct: 87 LLQSAIGPEDCVDESNWITGTLIDLVLWKFAKSYAAVYFLPTAFYHLHLEMAQEIAVRPSWPQRSRGLRSKRDFIV-RDVLGRVVDYNSKKPVVFVVNVDQIHWNLFRVQLSPKPKLQLFEPMGKLASRSG----ISYRSVPRAVIEWLNVCYPQHK----------------------------CWLQRTMSAIENKQQVSGFDCGVACLLYADKCGRGQSGEEINDSIDQNAITSFRKQLR 296
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: K3WTS6_GLOUD (ULP_PROTEASE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS6_GLOUD) HSP 1 Score: 148 bits (374), Expect = 1.080e-39 Identity = 91/254 (35.83%), Postives = 125/254 (49.21%), Query Frame = 1 Query: 133 VLRGALSG--DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEF--------------------AAYSLRDGSTREDMAAARDILGRPVDYAEGKPFVLPF-IQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825 +L+ A S D++ E SWLTS +D+++ + A Y + F+P +F A Y + + D RD+LGR VDY +P + I HW L RVQL P PELQLFEPMG+ A R G IS R IP+ V WL YP ++ W+ ++ SA+T+ QQ +GFDCGVA LLYA+KCGQGQ + I+E T Q +T +R L+ S+ Sbjct: 37 LLQSAFSSEDDKIDETSWLTSTLMDLILWRLANLYPNVHFLPTDFFHCHLEGVSRNYHHHYPRHHAPYMVNRANEESDFHV-RDVLGRAVDYKSNQPILFAVNIGLIHWNLFRVQLTPHPELQLFEPMGRLASRTG----ISYRSIPRSVIEWLETCYPQHKN----------------------------WISKAVSAITKPQQVSGFDCGVACLLYADKCGQGQTHQQINERTDQHAITSFRHTLQSQLRSM 257
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: H3GTS9_PHYRM (ULP_PROTEASE domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTS9_PHYRM) HSP 1 Score: 148 bits (373), Expect = 3.430e-39 Identity = 88/238 (36.97%), Postives = 125/238 (52.52%), Query Frame = 1 Query: 130 LVLRGALSGDEVAEQS-WLTSAFIDIVMRKFARTYSSTTFMPIEF----------AAYSLRDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807 L+L+ A +++ ++S W+TS ID+++ KFA Y + F+P F AA+ R S R+ RD+LGR +DY + V + + HW L RVQL P P LQLFEPMG+ A R G IS R +P+ V WL+ YP WM R+ SA+T +QQ +GFDCGVA LLYA+KCG+GQ E+I++ Q +T +R+ L+ Sbjct: 97 LLLQSAFGPEDLVDESNWITSTLIDLMLWKFANLYPAVHFLPTAFYHFHLEAAVQAAWHRRRRSKRDYQV--RDVLGRVMDYDDNASLVFIVNVDRIHWNLFRVQLAPTPRLQLFEPMGRLASRSG----ISYRSVPRAVIEWLDVCYP----------------------------QYKGWMERTVSAITNKQQVSGFDCGVACLLYADKCGRGQSGEEINDQIDQQAITSFRKQLQ 300
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A329RWA6_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWA6_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.780e-39 Identity = 91/235 (38.72%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 157 DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL---------------RDGSTREDMAAARDILGRPVDYAEGKPFVLPFIQNN---HWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807 D V E SW+T FID+++ KFA Y + FMP F + L R T+ D RD+LGR VDY P V FI N HW L RVQL P P+LQLFEPMG+ A R G IS R +P+ V WL+ YP W+ R+ SA+T +QQ +GFDCGVA LLYA+KCG+G E+I++ Q +T +R+ L+ Sbjct: 105 DRVDESSWITGTFIDLMLWKFASLYPAVHFMPTAFYHFHLEAAVKAAGSPWRRRCRSHRTKRDYQV-RDVLGRVVDYDRDTPLV--FIVNVGQIHWNLFRVQLSPTPKLQLFEPMGRLASRSG----ISYRSVPRAVIEWLDVCYP----------------------------QYKCWLERTVSAITDKQQISGFDCGVACLLYADKCGRGLSGEEINDEIDQQAITSFRKQLQ 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11889.1.1 >prot_P-wetherbeei_contig11889.1.1 ID=prot_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp RNVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPAASGLPELVLRGALback to top mRNA from alignment at P-wetherbeei_contig11889:579..1763- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11889.1.1 ID=mRNA_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig11889:579..1763- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11889:579..1763- >mRNA_P-wetherbeei_contig11889.1.1 ID=mRNA_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig11889:579..1763- (Phaeothamnion wetherbeei SAG_119_79)back to top |