prot_P-wetherbeei_contig11871.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11871.2.1
Unique Nameprot_P-wetherbeei_contig11871.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length432
Homology
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A6H5KDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC0_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 8.400e-62
Identity = 121/222 (54.50%), Postives = 146/222 (65.77%), Query Frame = 0
Query:   95 DEAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTR-DPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRG 315
            D+ E+ESRTVFVGNLP S T K +K  F ++G VESVRLRSVAV G  V +AG+  L+R+VCVN G +   VK +VNAYVV++   +   A A NG +VGGKH+RVD A     D  RSVFLGNLP DA EE VR  FA++L GG  ++EGVRLVRD+ T  GKGFGY+LL DR  A  AL+   T L                GRP+RVM CGKRTKG+ G
Sbjct:  309 DDEERESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVKGTAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAAEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALHGTKLK---------------GRPLRVMPCGKRTKGRGG 515          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: D8LFV0_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV0_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.090e-59
Identity = 136/278 (48.92%), Postives = 161/278 (57.91%), Query Frame = 0
Query:   74 AEKLDAGEASGPKGGKKRAKVDEAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTR-DPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRAE--GALRRL 348
            AE  D  +AS PK            KESRTVFVGNLP S T K +K  F ++G VESVRLRSVAV G  V +AG+  L+R+VCVN G +   VK +VNAYVV++   +   A A NG +VGGKH+RVD A     D  RSVFLGNLP DA EE VR  FA++L GG  ++EGVRLVRD+ T  GKGFGY+LL DR  A  AL+   T L                GRP+RVM CGKRTKG+ G                    +EGRR    G LRRL
Sbjct:  302 AEAGDTAKASAPKEXXXXXXXXXXXKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDCASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLK---------------GRPLRVMPCGKRTKGRGG-------VAKPGLEDHKFASFEGRRTTDVGVLRRL 557          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A835YND0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.040e-53
Identity = 113/225 (50.22%), Postives = 136/225 (60.44%), Query Frame = 0
Query:   93 KVDEAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSAT-PTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGG 316
            K + A+ E+RTVFVGN+PV      I   F ++G VE+V             EAGN  LMR+ C+ TGK+   VKD+VNAY+VF+ A +A AA A NG E+ G H+RVDSA  PT DP RSVFLGNLP+D  EE VR HF+     G  AIEGVRL+RD DTQ GKGFGY+L RD  T   AL  D + L                 R +RV VCG+RTKG RGG
Sbjct:  185 KTEAADLEARTVFVGNVPVKLKRDKIASFFKEYGKVETVL------------EAGNQALMRKACIATGKINEKVKDSVNAYIVFQDAESARAALAANGRELNGHHLRVDSAARPTVDPARSVFLGNLPFDVREEEVRAHFSEISEDGTAAIEGVRLIRDPDTQLGKGFGYVLFRDAATVGAALRLDGSALRK---------------RELRVHVCGRRTKGGRGG 382          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: W7U9S2_9STRA (Rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9S2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.260e-49
Identity = 103/216 (47.69%), Postives = 135/216 (62.50%), Query Frame = 0
Query:   96 EAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVD--SATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKR 309
            E  KE RT+FVGNLP S + K ++ +F ++G +ESVR RS+A+AGAK+ + GN  L ++V  N  +L  + KDT NAYVVF    +A AA A N   V  KH+RVD   +   RDP+RSVFLGNLP+DA E+ +R H A  L GG   +EGVRLVRD +TQ+GKGFG++LL+D+ +   AL  + T                  GR IRV  CGKR
Sbjct:  204 EKAKERRTIFVGNLPTSISKKRVQNIFKEYGEIESVRFRSMALAGAKIDDHGNQRLAKKVSANK-RLLSDAKDTFNAYVVFLREDSAEAAIAANNRLVEAKHLRVDRVGSETIRDPKRSVFLGNLPFDAKEDTIRAHVAQELEGGPGDVEGVRLVRDPETQQGKGFGFVLLKDKASVAAALRLNGTSFQ---------------GRKIRVTTCGKR 403          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A7S2KIR5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIR5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.440e-47
Identity = 114/257 (44.36%), Postives = 146/257 (56.81%), Query Frame = 0
Query:  100 ESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVP--EAGNDDLMRRVCVNTGKLALNVKDTVNAYVVF-ETAVAAAAARADNGAEVG-GKHIRVDSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRA-EGALRRLVGK 351
            E RT+FVGNLP + T K + +LF+  G V S R+RSVAV G K+P  +AGN +LMR+VC NT  +  + K TVN YVVF +T     A + +N  E   G HIRVDS+ PT D +RSVF+GNLPY   EE++R+HF     G D  IE VR+VRD +T + KGF Y+L + R+   EAL    +  A                R IRV VCG+R KG RG                    YEGRRA EGA +R++ K
Sbjct:  152 EDRTIFVGNLPGAITRKELARLFADCGKVTSTRIRSVAVKGVKLPKEQAGNQNLMRKVCANTNLVDEDSKKTVNGYVVFADTKSVQEALKLNNMKEPNSGLHIRVDSSKPTYDNKRSVFVGNLPYGIMEEQLRKHFGEACGGVDN-IENVRIVRDNETMKCKGFAYVLFKSRDIVAEALRLHGSTCAK---------------REIRVQVCGRRYKGARGNEDDNTGGRNANR-------YEGRRATEGATKRILNK 385          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A7R9UAS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 5.580e-47
Identity = 113/274 (41.24%), Postives = 151/274 (55.11%), Query Frame = 0
Query:   98 EKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTR---DPRRSVFLGNLPYDATEERVRRHFAARLT---GGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKR--TKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRAEGALRRLVGKGKLTGVKPGRGR 363
            E++ RT+FVGNLPVS   +H+++ FS++G VE+VRLRS+AV G K+ EAGN  LMR+V  N G+L  +VK + NAYV +E   A   A   +GAE+G +HIRVD    ++   +  R++FLG+LPY   EE VR  F   L+   GGD  ++GVRL+RD+ T  GKGFGYLLL  +    +AL   E                  GGR  RV  CG+R  T+  RG                   G      +GA RRL  K KL   KP +G+
Sbjct:   83 EEKQRTIFVGNLPVSLKKRHVERFFSRYGRVEAVRLRSMAVKGVKIDEAGNQSLMRKVAANRGELDTDVKKSCNAYVRYEDKEAVDKALEADGAELGDRHIRVDRLQGSQALFNASRTLFLGSLPYTVDEEDVRHKFIELLSASHGGDV-VQGVRLIRDKSTLLGKGFGYLLLSSKAAVADALRLPEVSF---------------GGRVARVQTCGRRFKTQNARGDVKPEKKQKKAKRNAESFEGARASELDGARRRLASK-KLR--KPSKGQ 337          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A448ZNA7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNA7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 5.860e-47
Identity = 101/221 (45.70%), Postives = 135/221 (61.09%), Query Frame = 0
Query:   98 EKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVP--EAGNDDLMRRVCVNTGKLALNVKDTVNAYVVF-ETAVAAAAARADNGAEVGGKHIRVDSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRG 315
            E+E RT+FVGNLP++TT K +  LF + G V S R+RSV V G K+P  +AGN ++MR+VCVNT ++  ++ D+V  YVVF E A    A   +N  E+GG  IRVD ATPT DP RSVF+GNLPY A E  ++ HF          + GVR+VRD++T + KGFGY+L R++ +   AL    +                   + IRVMVCGKR KGK+G
Sbjct:  118 EEEERTIFVGNLPLTTTRKGLAALFRECGPVASSRIRSVPVTGIKLPKDQAGNQNMMRKVCVNTNQIDKSLTDSVQGYVVFKELADVEKALEMNNKIELGGMKIRVDRATPTVDPSRSVFVGNLPYAAKESTLKEHFEXGCLLEPEDVLGVRIVRDKETFQCKGFGYVLFREKNSVPTALKLHGSTYMK---------------KKIRVMVCGKRFKGKKG 323          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A067CXJ9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CXJ9_SAPPC)

HSP 1 Score: 176 bits (445), Expect = 1.280e-46
Identity = 111/270 (41.11%), Postives = 150/270 (55.56%), Query Frame = 0
Query:   95 DEAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTG-----GDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRAE---GALRRLVGKGKLTG 356
            ++ EK  RT+FVGN+ +  T + +KK FS  G VES RLRSV VAG  V + G  +L+++VC N  KL +  +D  NAYVVF +  + AAA A NGA+   K IRVD    T DP+R+VF+GN+ + ATE+ +R HF + L       G   +E VR++RD+DT  GKGFGY+LL+D  TA +AL  D + +               G R +RV VCGKR K                        +EGRRA+   GA  R++ K KL G
Sbjct:  115 EDDEKAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSVPVAGCAVDQHGKQNLVKKVCANK-KLFVEGRDNCNAYVVFASEDSIAAALALNGADFHEKKIRVDRKVLTTDPKRTVFVGNMAFTATEDEIRNHFESNLEKDDEDEGSALVESVRIIRDKDTHLGKGFGYVLLKDVTTAAKALKLDGSKI---------------GKRELRVSVCGKRFK--------------TTATDKTARPFEGRRAKPAPGAQMRVMKKRKLDG 354          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A485LPI4_9STRA (Aste57867_24108 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPI4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.620e-45
Identity = 110/260 (42.31%), Postives = 151/260 (58.08%), Query Frame = 0
Query:   98 EKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTA--IEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRAE-GALRRLVGKGKL 354
            EK++RT+F+GN+ +  T+  IKK F   G +ESVRLRSV VAG KV + G  +L+++VC N  K+ ++ +D+ NAY+VF    +  AA A NG+E   K IRVD  T + D +RSVF+GN+ + AT++ VR+HF   L  GD    +E VRL+RD+ T  GKGFGY+LLRD  TA +AL+ +   +               G R +RV VCGKR K  +G                  G +EGRRA  GA  RL  K +L
Sbjct:  147 EKDARTIFIGNVSLEATIADIKKHFLACGKIESVRLRSVPVAGCKVDKNGKQNLVKKVCANK-KIFVDGRDSCNAYLVFVDHTSVDAALALNGSEFCSKVIRVDRKTVSMDAKRSVFVGNVAFTATDDDVRKHFEKALRDGDDTPVVESVRLIRDKTTHLGKGFGYVLLRDVSTAAKALALNGQKM---------------GKRELRVTVCGKRFKNTQG-------------EKKVDGKFEGRRARPGAQMRLQKKRQL 377          
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Match: A0A1V9ZDC4_9STRA (RNA-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDC4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.140e-45
Identity = 109/268 (40.67%), Postives = 148/268 (55.22%), Query Frame = 0
Query:   95 DEAEKESRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDDLMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRVDSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTG-----GDTAIEGVRLVRDRDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRPIRVMVCGKRTKGKRGGSXXXXXXXXXXXXXXXXGGYEGRRAE---GALRRLVGKGKL 354
            ++ EK  RT+FVGN+ +  T + +KK FS  G VES RLRS+ VAG  V + G  +L+++VC N  KL +  +D  NAYVVF +  +   A A NGAE   K +RVD   PT D +R+VF+GN+ + ATE+ +RRHF A +       G   +E VRL+RD+DT  GKGFGY+LL+D  TA +AL  + + +               G R +RV VCGKR K                        +EGRRA+   GA  R+V K KL
Sbjct:  119 EDDEKAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSLPVAGCAVDQHGKQNLVKKVCANK-KLFVEGRDNCNAYVVFASEESIEKALALNGAEFHEKKLRVDRKVPTIDAKRTVFVGNVAFTATEDDLRRHFEANIEKDDEDEGSALVESVRLIRDKDTHLGKGFGYVLLKDVPTATKALKLNGSKI---------------GKRELRVSVCGKRFKSTAADKTPRT--------------FEGRRAKPAPGAQMRVVKKRKL 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11871.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDC0_9PHAE8.400e-6254.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFV0_ECTSI1.090e-5948.92White-brown-complex ABC transporter family (Partia... [more]
A0A835YND0_9STRA1.040e-5350.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U9S2_9STRA1.260e-4947.69Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7S2KIR5_9STRA1.440e-4744.36Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7R9UAS7_9STRA5.580e-4741.24Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A448ZNA7_9STRA5.860e-4745.70Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A067CXJ9_SAPPC1.280e-4641.11Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LPI4_9STRA1.620e-4542.31Aste57867_24108 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZDC4_9STRA5.140e-4540.67RNA-binding protein n=1 Tax=Achlya hypogyna TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 103..201
e-value: 8.0E-10
score: 48.6
coord: 212..304
e-value: 5.8E-7
score: 39.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 213..275
e-value: 5.9E-6
score: 26.0
coord: 104..135
e-value: 1.3E-5
score: 25.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 211..308
score: 13.037887
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 102..205
score: 11.792842
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 36..208
e-value: 2.7E-20
score: 74.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 209..345
e-value: 1.6E-19
score: 72.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 4..332
NoneNo IPR availablePANTHERPTHR23236:SF25RNA-BINDING PROTEIN 34coord: 4..332
IPR034220RBM34, RNA recognition motif 1CDDcd12394RRM1_RBM34coord: 102..201
e-value: 1.54882E-25
score: 97.7158
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 208..335
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 99..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11871contigP-wetherbeei_contig11871:616..1956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11871.2.1mRNA_P-wetherbeei_contig11871.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11871 616..1956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11871.2.1 ID=prot_P-wetherbeei_contig11871.2.1|Name=mRNA_P-wetherbeei_contig11871.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=432bp
KKKQKRDKKRKRDEEETGAAEAAPKPNEEHGSRPGEGKRASVDSDDEGDA
EGNGAKKSANSGDNDDAMDDDDAAEKLDAGEASGPKGGKKRAKVDEAEKE
SRTVFVGNLPVSTTVKHIKKLFSKHGTVESVRLRSVAVAGAKVPEAGNDD
LMRRVCVNTGKLALNVKDTVNAYVVFETAVAAAAARADNGAEVGGKHIRV
DSATPTRDPRRSVFLGNLPYDATEERVRRHFAARLTGGDTAIEGVRLVRD
RDTQEGKGFGYLLLRDRETAVEALSFDETPLAPEPAAVPDGGARGGGGRP
IRVMVCGKRTKGKRGGSGGGADDDDDNEGEGEGGGYEGRRAEGALRRLVG
KGKLTGVKPGRGRGGGFGGRRGGGGGRFGGKQGSTGRRSGGDGERSFRSG
GGRGGGGGRGGRGGSGRGSFRGGRWVRGRGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034220RBM34_RRM1
IPR035979RBD_domain_sf