prot_P-wetherbeei_contig1184.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1184.2.1
Unique Nameprot_P-wetherbeei_contig1184.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length253
Homology
BLAST of mRNA_P-wetherbeei_contig1184.2.1 vs. uniprot
Match: D7G172_ECTSI (TPX2_importin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G172_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.650e-29
Identity = 98/250 (39.20%), Postives = 139/250 (55.60%), Query Frame = 0
Query:    3 LPDYNKLAAAGLSHKSAGR---KLTDFVPFELTTEARGVAKRVVLEARLRAKEKEEAEAHNVHALPLRPRGPRFMPKPSDRPLTEVCEFHLEGTALHEAAERRLREQAAEEKRRAMEAVQIKALPLPAATYEPDFRFAPPESTLTVPVELTLASTARAAERQAWEHASAERTAAVEAEKAAQXXXXXXAEEAELKRLRSVPASEGGFAFKARPMAWVDEMPLRSRPAPMALTLPVTPNLQTTKRAAARAA 249
            +PDY++L+ +     +A       T+  PF L ++ RG AK+ +L  R+  + ++E  A  V A PL      F P+PSDR LTE  EF L   A HE A +  +++  +E+ RA  A ++ ALPLPAAT+EP+      E +LT P+E  L S+ARA  R  W+  S  R A  E  K   XXXXXX E   +  LR    ++GG +FKA+P+ W    P  ++ +   LT PVTPNL+T +RA   AA
Sbjct:  346 MPDYSRLSQSRRQSAAAPEVPPAPTEPRPFNLRSDTRGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPSDRALTETSEFCLSSQARHEKAAQEFQDRVRKEEERARRATEVIALPLPAATFEPELYPERTEVSLTQPIERVLHSSARAEGRAKWDEESQARQAHEERVKREXXXXXXXXERRSISELRRRSHADGGMSFKAKPIKWNSAPPEVAQLSTAPLTTPVTPNLRTKRRAMNNAA 595          
BLAST of mRNA_P-wetherbeei_contig1184.2.1 vs. uniprot
Match: A0A835SUW9_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SUW9_CHLIN)

HSP 1 Score: 68.9 bits (167), Expect = 1.100e-9
Identity = 77/228 (33.77%), Postives = 102/228 (44.74%), Query Frame = 0
Query:   28 PFELTTEARGVAKRVVLEARLRAKEKEEAEAHNVHAL--PLRPRGPRFMPKPSDRPLTEVCEFHLEGTALHEAAERRLREQAAEEKRRAMEAVQIKALPLPAATYEPDFRFAPPESTLTVPVELTLASTARAAERQAWEHASAERTAAVEAEKAAQXXXXXXAEEAELKRLRSVPASEGGFAFKARPMAWVDEMPLRSRPAPMA-LTLPVTPNLQTTKRAAARAACER 252
            PF L TE RG A R V+ ARL A+E     A    AL  P+    P   P+P  + LT    F L   A HE  E + R    EE+       + KA P+        FR     + LTVP E+ L ++ARAAER  +  A  E+    E  +          EE E ++LR          F ARPM  +  +P  ++PAP   LT PV+P L   +RA   A  E+
Sbjct:  438 PFRLATEQRGTAHRSVMAARLAAEEDAAKRARVPRALGLPMSTDMPLVPPRPEPKSLTVPEPFGLASEARHEDYEEKRRRALQEEQAARRSEAEFKARPMWKGA---PFRVHDSGAVLTVPEEVPLHTSARAAERDVFNRAVEEKWKEAEVAQQLAAQEARMREEEERRQLRKAAV------FHARPMPDLS-VPAAAKPAPAKPLTKPVSPRLGRKRRAGGAAGEEK 655          
BLAST of mRNA_P-wetherbeei_contig1184.2.1 vs. uniprot
Match: A0A2J8A7H0_9CHLO (Targeting protein for Xklp2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A7H0_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 8.190e-9
Identity = 77/223 (34.53%), Postives = 103/223 (46.19%), Query Frame = 0
Query:   28 PFELTTEARGVAKRVVLEARLRAKEK--EEAEAHNVHALPLRPRGPRFMPKPSDRPLTEVCEFHLEGTALH-EAAERRLREQAAEEKRRAMEAVQIKALPLPAATYEPDFRFAPPESTLTVPVELTLASTARAAERQAWEHASAERTAAVEAEKAAQXXXXXXAEEAELKRLRSVPASEGGFAFKARPMAWVDEMPLRSRPAP-MALTLPVTPNLQTTKRAAA 246
            PF+L TE RG   R  + AR+ A++     A     H LPL    P   PKP  RPLT    F L   A H E  E++ R   AE+  +  +A + KA P+        FR     + LTVP ++ L ++ARAAER  +  A A + AA EA            E+ E +R+R          F ARP+  +   P    P P   LT PV+P L  +KR AA
Sbjct:  333 PFKLATEQRGAQYRSTMAARVAAEDDAARRARVPRAHGLPLSTDMPLIPPKPDPRPLTVPEPFGLASEARHGEFQEQKKRAVEAEKAAKRADA-EFKARPMWRGV---PFRVHESTTGLTVPEDVQLHTSARAAERDVFNKAVAAQLAAQEAR---------MREDEERRRVRKAAV------FHARPVPDLSAAPAAKAPVPHKPLTKPVSPRLGRSKRHAA 536          
BLAST of mRNA_P-wetherbeei_contig1184.2.1 vs. uniprot
Match: A0A835SI11_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SI11_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 2.570e-6
Identity = 72/225 (32.00%), Postives = 93/225 (41.33%), Query Frame = 0
Query:   28 PFELTTEARGVAKRVVLEARLRAKEKEEAEAHNVHAL--PLRPRGPRFMPKPSDRPLTEVCEFHLEGTALHEAAERRLREQAAEEKRRAMEAVQIKALPL-PAATYEPDFRFAPPESTLTVPVELTLASTARAAERQAWEHASAERTAAVEAEKAAQXXXXXXAEEAELKRLRSVPASEGGFAFKARPMAWVDEMPLRSRPAPMALTLPVTPNLQTTKRAAARAA 249
            PF L TE RG A R  + ARL A+E+    A    AL  PL    P   P+P  + LT    F L   A HE                     + KA P+   A + P    A     LTVP E+ LA++ARAAER+ ++ A  E+    E  +          EE E ++LR          F ARPM  +   P         LT PV+P L   KR A + A
Sbjct:  510 PFRLATEQRGTAHRSAMAARLAAEEEAAKRARVPRALGLPLSTDMPLVPPRPEPKSLTVPEPFGLASEARHEEHXXXXXXXXXXXXXXRRAEAEFKARPMWKGAPFRPHDSGA----VLTVPEEVPLATSARAAEREVFDRAVQEKWKEAEVAQQLAAQEARMREEEERRQLRKAAV------FHARPMPDLSAPPAAKXXXAKPLTKPVSPRLGRNKRRAGQGA 724          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1184.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G172_ECTSI1.650e-2939.20TPX2_importin domain-containing protein n=1 Tax=Ec... [more]
A0A835SUW9_CHLIN1.100e-933.77Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A2J8A7H0_9CHLO8.190e-934.53Targeting protein for Xklp2 n=1 Tax=Tetrabaena soc... [more]
A0A835SI11_9CHLO2.570e-632.00Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..199
IPR027329TPX2, C-terminalPFAMPF06886TPX2coord: 150..213
e-value: 8.9E-10
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1184contigP-wetherbeei_contig1184:4288..5976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1184.2.1mRNA_P-wetherbeei_contig1184.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1184 4042..6001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1184.2.1 ID=prot_P-wetherbeei_contig1184.2.1|Name=mRNA_P-wetherbeei_contig1184.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=253bp
MVLPDYNKLAAAGLSHKSAGRKLTDFVPFELTTEARGVAKRVVLEARLRA
KEKEEAEAHNVHALPLRPRGPRFMPKPSDRPLTEVCEFHLEGTALHEAAE
RRLREQAAEEKRRAMEAVQIKALPLPAATYEPDFRFAPPESTLTVPVELT
LASTARAAERQAWEHASAERTAAVEAEKAAQERAAKEAEEAELKRLRSVP
ASEGGFAFKARPMAWVDEMPLRSRPAPMALTLPVTPNLQTTKRAAARAAC
ER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027329TPX2_C