mRNA_P-wetherbeei_contig11839.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A836C9R0_9STRA (Epimerase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R0_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.380e-43 Identity = 86/129 (66.67%), Postives = 97/129 (75.19%), Query Frame = 1 Query: 13 RSNSLVMAAGKALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFA-VSGVGVAVPEGEAFDY-------DLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 RS L M+AGKALIVQNKGGGHGELG+HLA IL KG+EVTLLQD A K KAK+PFASYG+LE+KG KVVW DFA GVG ++P EAFDY D T K+VA A +W K+YVYVSSAGMYK Sbjct: 37 RSAELSMSAGKALIVQNKGGGHGELGYHLANILQEKGVEVTLLQDSAAK-KAKQPFASYGELESKGVKVVWGDFAGEGGVGASLPSDEAFDYVFDNYAKDPATAKDVAVAAKSWSVKNYVYVSSAGMYK 164
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A6H5J6N0_9PHAE (Epimerase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6N0_9PHAE) HSP 1 Score: 150 bits (380), Expect = 8.610e-42 Identity = 76/127 (59.84%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 16 SNSLVMAAGKALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDY-------DLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 S +GKALI QNKGGGHGELG+HLA L K + VTLLQDGAGKNK +PFASYGDLE+KG +VW DF+ GVG +PEGE+FDY D++TCK++A + AW K+Y YVSS GMYK Sbjct: 42 SQGFTTMSGKALIAQNKGGGHGELGYHLALKLIEKDISVTLLQDGAGKNKDNQPFASYGDLESKGATIVWGDFS-EGVGKLIPEGESFDYVFDNYAKDVDTCKDLADCSKAWGVKNYAYVSSGGMYK 167
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A7S3M0F8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0F8_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.820e-27 Identity = 64/120 (53.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 34 AAGKALIVQNKGGGHGELGFHLA-KILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEA-----FDYDLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 AAG ALIVQNKGGGHGELG+HLA K+ KGL+VT++ D A K K+K PF SY DLEA G +V W A G + EG FD K+V AAW K+Y YVSS GMYK Sbjct: 18 AAGAALIVQNKGGGHGELGYHLALKLAKDKGLKVTMINDSAAK-KSKPPFNSYADLEAAGVEVKWVALAEEGALASAMEGVGPCDYVFDNQNVCTKDVQKAVAAWSPKAYAYVSSGGMYK 136
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A7S2BN61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BN61_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.950e-27 Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 40 GKALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKA-KEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDY-------DLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 G+ALI+QNKGGGHGELGFHLA IL KG+ VTLL DG + K+ K+P+ SY LE KG ++VW+D A SG ++ EG AF+Y D ++ +A +W +YV+VSSAGMY+ Sbjct: 62 GRALIIQNKGGGHGELGFHLAGILEKKGISVTLLHDGGPEPKSGKQPWDSYTQLEGKGVEIVWSDVAASG-SASLKEGPAFEYVFDNWSKDPDSATGFVDLAKSWDVSNYVFVSSAGMYE 180
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A6V1PCS3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCS3_HETAK) HSP 1 Score: 111 bits (277), Expect = 7.930e-27 Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 16 SNSLVMAAGKALIVQNKGGGHGELGFHLAKILTA-KGLE-VTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDY-------DLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 S S + G ALIVQNKGGGHGE+GFHLAKIL KG + VT+LQDG G+ K PF+ YG+LEA G +VVW D V G GVA G+ FDY D T K +A MA A +++ YVSS GMYK Sbjct: 34 SRSALQMLGSALIVQNKGGGHGEIGFHLAKILKEEKGCDAVTILQDG-GEPSGKLPFSRYGELEALGCEVVWCD--VKGEGVARLAGKKFDYVFDNWSKDEATVKPIADMAKAQNVETFAYVSSGGMYK 159
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A0G4IC15_9ALVE (Epimerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IC15_9ALVE) HSP 1 Score: 105 bits (261), Expect = 2.060e-24 Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 1 LDLLRSNSLVMAAGKALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDYDLET-------CKEVASMAAAWKCKSYVYVSSAGMYKG 378 L L S + +G ALI+QNKGGGHGE+GFHLAK+L +KG+ VT+L DG G +K PF Y L T+V+W D + + V ++ G+ FDY + K VA +A W K+YVYVSS GMYKG Sbjct: 37 LSALSPRSSLEMSGNALILQNKGGGHGEIGFHLAKLLNSKGIGVTILNDG-GSPISKTPFNMYDQLS--NTEVIWTDLSSADVP-SLLSGKTFDYVFDNVSKNEAGAKTVADLAKQWGVKNYVYVSSGGMYKG 165
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A813F4T9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F4T9_POLGL) HSP 1 Score: 104 bits (259), Expect = 6.490e-24 Identity = 63/119 (52.94%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 34 AAGKALIVQNKGGGHGELGFHLA-KILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAV----PEGEAFDYDLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 AAG ALIVQNKGGGHGE+G+HLA + KGL+VTL+ D A K K K PF SYG LEA G +V WAD G+ A+ P FD + KE+ AW K+Y YVSS GMYK Sbjct: 83 AAGAALIVQNKGGGHGEIGYHLALNLAKEKGLKVTLIGDSAAK-KDKPPFNSYGALEAAGVEVKWADLENGGLAGALEGVGPCEYVFDNENVCTKELQKAVKAWTPKAYAYVSSGGMYK 200
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A7S2G0W8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0W8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.520e-21 Identity = 60/121 (49.59%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 40 GKALIVQNKGGGHGELGFHLAKILTAK-GLEVTLLQDGAGKNKA-KEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGE---AFDY---DLETCKEVASMAAAWKCKSYVYVSSAGMYKG 378 G+AL+VQNKGGGHGELG+HL L K GLEVT++ DG K KEP+ SY +LEA G ++VWAD G G+ GE FD D + K A +W +YV+VSSAGMY G Sbjct: 64 GRALVVQNKGGGHGELGYHLCLTLADKYGLEVTMVHDGGPDAKTGKEPWDSYKNLEAAGVEIVWADL---GAGMPSLTGEFEFVFDNWSKDADLAKPYVEAAKSWGVSNYVFVSSAGMYSG 181
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: L1J2X8_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2X8_GUITC) HSP 1 Score: 96.3 bits (238), Expect = 2.270e-21 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 46 ALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDYDLE------TCKEVASMAA-AWKCKSYVYVSSAGMYK 375 ALIVQNKGGGHGE+GFHLA+ L +KGL+VTLLQD A K + K PF +YG++EA+G +++ + ++ G++F + + T VA +A W+ K+Y YVSSAGMY+ Sbjct: 4 ALIVQNKGGGHGEIGFHLARQLRSKGLDVTLLQDSAAKME-KLPFKNYGEIEAEGVEIISCNLEDPSRILSSLSGKSFTHVFDNYAKDKTVSTVAGLAKNTWRVKNYAYVSSAGMYE 119
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Match: A0A7S2XZ15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ15_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.150e-21 Identity = 57/126 (45.24%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 31 MAAGKALIVQNKGGGHGELGFHLAKILTAKGL----EVTLLQDGAGKNKAKEPFASYGDLEAKGTKVVWADFAVSGVGVAVPEGEAFDY-------DLETCKEVASMAAAWKCKSYVYVSSAGMYK 375 + A ALIVQNKGGGHGELG+HLAKIL++ + VT++ DG + K PF YG L+ G V+WAD + + + + + F Y D +TCK VA ++ W +YVYVSSAGMYK Sbjct: 45 LKASAALIVQNKGGGHGELGYHLAKILSSPEVPQVTSVTIINDGGPEPVQKLPFTEYGGLD--GVDVIWADIKSADIPALLGD-KTFKYVFDNYAKDEDTCKAVADLSKKWDVDNYVYVSSAGMYK 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11839.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11839.1.1 >prot_P-wetherbeei_contig11839.1.1 ID=prot_P-wetherbeei_contig11839.1.1|Name=mRNA_P-wetherbeei_contig11839.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MAAGKALIVQNKGGGHGELGFHLAKILTAKGLEVTLLQDGAGKNKAKEPFback to top mRNA from alignment at P-wetherbeei_contig11839:290..1484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11839.1.1 ID=mRNA_P-wetherbeei_contig11839.1.1|Name=mRNA_P-wetherbeei_contig11839.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at P-wetherbeei_contig11839:290..1484- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11839:290..1484- >mRNA_P-wetherbeei_contig11839.1.1 ID=mRNA_P-wetherbeei_contig11839.1.1|Name=mRNA_P-wetherbeei_contig11839.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig11839:290..1484- (Phaeothamnion wetherbeei SAG_119_79)back to top |