mRNA_P-wetherbeei_contig11827.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11827.2.1
Unique NamemRNA_P-wetherbeei_contig11827.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: D7G579_ECTSI (Enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G579_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 2.410e-99
Identity = 154/262 (58.78%), Postives = 189/262 (72.14%), Query Frame = 1
Query:   10 KVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEETLAGYYARREV 789
            KV VLVGNCDGFVGNRML+WY+ E  F++E+GASP ++D A +AFGM +GPLEM+DVAGNDIS+LI+KERG LDP KR+P +RY +LGD+L E GR GQKTGKGWY YE G R P   PEVAALI+  R E              G+ P       R+IS EEIV R FY LINEGFR   EGIAE P DIDVVW +GY+WP WRGGPMFWADE+    L R++ +Y    P+V+HWQP+PLL RLA++ +T++ YYA + +
Sbjct:  474 KVGVLVGNCDGFVGNRMLKWYTAETEFMLEEGASPVEVDRAVKAFGMGMGPLEMSDVAGNDISYLIKKERGLLDPAKRNPHERYCSLGDKLVEVGRYGQKTGKGWYDYEKGSRKPLPSPEVAALIEAHRKE-------------TGSRP-------RKISPEEIVERCFYALINEGFRCLEEGIAEHPDDIDVVWVYGYAWPGWRGGPMFWADEVGARTLVRQMAKYQELLPNVSHWQPSPLLLRLAETGQTVSAYYANKAI 715          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A835ZCY2_9STRA (Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY2_9STRA)

HSP 1 Score: 295 bits (756), Expect = 5.380e-92
Identity = 147/258 (56.98%), Postives = 175/258 (67.83%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGI-----RTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEET 759
            GKV VLVGNCDGFVGNRML+ Y DE  F++E+GA+PRQID   R FGM +GPLE +D+AGNDISWLIRK RG  DP +RDP  RY ALGD LCE GR GQK G+GWYRY+AG      + P+DDPEVAALID               R+ +G A       PR I  +EI  R   P++NE F    EGIA+RP DIDVVW +GY+WP W+GGPMFWADE+   ++  +L  YGA +PDVAHW+PAPLL  L    ET
Sbjct:  464 GKVGVLVGNCDGFVGNRMLKGYQDEVLFMLEEGATPRQIDTVMRDFGMLLGPLETSDLAGNDISWLIRKARGLTDPARRDPGARYCALGDALCEAGRFGQKVGRGWYRYDAGDSRSKGKAPQDDPEVAALIDA-------------HRRAHGVAM------PRAIVADEIAERCLLPMLNEAFLILGEGIADRPGDIDVVWVYGYAWPVWKGGPMFWADELGLDVVLAKLRAYGARHPDVAHWRPAPLLEELVARGET 702          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: D5X1H3_THIK1 (3-hydroxyacyl-CoA dehydrogenase n=5 Tax=Thiomonas TaxID=32012 RepID=D5X1H3_THIK1)

HSP 1 Score: 235 bits (599), Expect = 3.660e-69
Identity = 130/257 (50.58%), Postives = 159/257 (61.87%), Query Frame = 1
Query:   10 KVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANP--DVAHWQPAPLLRRLADSEETLAG 768
            K AV+ G CDGF+GNRM+  Y   A FL+E+GASP+Q+D A  A+GMA+GP  M D+AGNDI W IRK R         P   YS L DRLCE+GR GQKTGKGWYRYEAG R    DPEV ALI   R E                      V PR+I + EIV R  Y L+NEG R   EGIA+R SDID+V+  GY +P WRGGPM +AD++  A++ R + ++ AA P  D A WQPAPLL  LA+  +T +G
Sbjct:  466 KTAVVSGVCDGFIGNRMIEHYGRMANFLVEEGASPQQVDRALEAWGMAMGPFRMGDLAGNDIGWAIRKRR-----YVEKPNVMYSRLADRLCEQGRYGQKTGKGWYRYEAGNRAALPDPEVDALITAYRQEI--------------------GVTPRKIDDAEIVDRCLYALVNEGARLLAEGIAQRASDIDMVYLAGYGFPAWRGGPMGYADQIGLAMVVRRMRQF-AAQPGGDAAFWQPAPLLAELAEQGKTFSG 696          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A2V6RMC1_9BACT (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6RMC1_9BACT)

HSP 1 Score: 233 bits (595), Expect = 1.500e-68
Identity = 123/249 (49.40%), Postives = 156/249 (62.65%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLAD 747
            GKV VL GNCDGF+GNRML  Y  EAAFL+E+GA+P Q+D     FG A+GP  ++D+AG D+ W IRK +       R    RYS + D LCE+GR GQKTG GWYRYE G RTP+ DPEVAALI E                    +  A  +  R++ +EE++ R  YPL+NEG R   EGIA RP DIDVV+ HGY +PR+RGGPM WAD +    +  E+ RY   +  +  W+PAPLLR+LA+
Sbjct:  468 GKVWVLAGNCDGFIGNRMLAGYFREAAFLVEEGATPEQVDRVLYDFGFAMGPFAVSDLAGLDVGWRIRKGKA----AARSTDLRYSPVADWLCERGRFGQKTGAGWYRYEPGGRTPRPDPEVAALIAE--------------------SARAQGIRRREVGDEEVLTRCLYPLVNEGARLLAEGIALRPGDIDVVYLHGYGFPRYRGGPMHWADTLGLKRVSDEIARYHRVHGRL--WEPAPLLRQLAE 690          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A7Y3J7F2_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=A0A7Y3J7F2_9GAMM)

HSP 1 Score: 233 bits (594), Expect = 1.960e-68
Identity = 129/254 (50.79%), Postives = 159/254 (62.60%), Query Frame = 1
Query:   10 KVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANP--DVAHWQPAPLLRRLADSEET 759
            K AVL   CDGF+GNRML  Y   A FL+E+GASP+Q+D A  A+GMA+GP  + D+AGNDI W IRK R         P  RYSALGDRLCE+GR GQKTG GWYRYE G R P  DP+V  LI E R                    +A  V PR+ ++ EIV R  Y L+NEG R   EGIA+R SDID+V+  GY +PRWRGGPM +AD +  A++ R ++++ A+ P  D A WQPAPLL  LA   +T
Sbjct:  466 KTAVLSLVCDGFIGNRMLEHYVRMANFLVEEGASPQQVDRALEAWGMAMGPYRVGDLAGNDIGWAIRKRR-----YVEKPTVRYSALGDRLCEQGRFGQKTGAGWYRYEPGKRDPLPDPQVDELIREHR--------------------KAIGVTPREFADAEIVERCIYALVNEGARLLAEGIAQRASDIDLVYLSGYGFPRWRGGPMKYADSVGLAMVARRMQQF-ASQPRGDAAFWQPAPLLAELAAQGKT 693          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A3C1XZT9_9BURK (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=2 Tax=Alcaligenaceae TaxID=506 RepID=A0A3C1XZT9_9BURK)

HSP 1 Score: 226 bits (577), Expect = 2.340e-68
Identity = 123/255 (48.24%), Postives = 159/255 (62.35%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEETLA 765
            GK+ VLVG CDGFVGNRM+  Y+ EA FL+E+GA+P Q+D A + FG+A+GPL MAD+AG DISW  RK      P       RYS + DRLCE+GR GQKTG G+YRYEAG RTP + P V ALI+ C  E                      +  R IS+EEIV R  Y L+NEG R   EGIA R SDIDV++ +GY +P  RGGP+F+A++   A +   + ++ AA+ ++  W+PAPLL RL    +T A
Sbjct:  207 GKLPVLVGVCDGFVGNRMVSPYTREAHFLLEEGATPAQVDGALQRFGLAMGPLRMADMAGLDISWAFRKRTAPTRPAH----LRYSRVADRLCEQGRFGQKTGSGFYRYEAGSRTPLEAPVVLALIETCARE--------------------DGIARRVISDEEIVQRTMYALVNEGARILEEGIARRASDIDVIYVNGYGFPVHRGGPLFYAEQQGLAQVLATIRQFHAAHGEL--WRPAPLLERLVAQGQTFA 435          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A7X3TZZ1_9BACT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X3TZZ1_9BACT)

HSP 1 Score: 228 bits (581), Expect = 3.760e-68
Identity = 126/250 (50.40%), Postives = 155/250 (62.00%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELER-YGAANPDVAHWQPAPLLRRLAD 747
            GKV VLVG CDGFVGNRML  Y  EA FL+E+GA P+Q+D    AFG+ +GP +M+D+AGND+SW IR+ +    P    P  RYS + DR+CE GR GQKTG GWYRYE G R P  DP V  +I                     AA EAG +  R +++E+IV R  YPL+NEG R   EGIA R SDIDVVW HGY +PR+RGGPMFWAD +    +   + R Y      +A   PAPLL+RLA+
Sbjct:  280 GKVGVLVGVCDGFVGNRMLAPYLREAEFLLEEGALPQQVDGVIYAFGLPMGPFQMSDLAGNDVSWYIRQRQAATRP----PDLRYSPIADRICELGRFGQKTGAGWYRYEPGSRAPVPDPAVEEIIV-------------------AAAAEAG-IERRPVADEDIVPRCLYPLVNEGARILEEGIALRASDIDVVWMHGYGFPRYRGGPMFWADLVGLRTIYDAMSRLYDEHGERLA---PAPLLKRLAE 502          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A0H5QLN1_9EUKA (Enoyl-CoA hydratase n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QLN1_9EUKA)

HSP 1 Score: 233 bits (593), Expect = 4.460e-68
Identity = 126/261 (48.28%), Postives = 167/261 (63.98%), Query Frame = 1
Query:   10 KVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRY-SALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEETLAGYYARR 783
            KV VLVGNC GFVGNRM+  Y  EAA+L+E+G S  Q+D+    FGMAIGP  M+D+AGNDI   IRK  G LDP  R   +RY   LGDRLC+ GR+G KTGKGWY Y  G R      EVAA+ID  R E              G A +      R+I ++E++ R+ YPLIN GF+   EGIA RPSDID+++ +GY WP +RGGPM++ADE+   +L   L +Y A + +V+HW+P+ LL++L   + +LA Y+A +
Sbjct:  476 KVPVLVGNCFGFVGNRMVEPYGREAAYLVEEGCSVAQVDSVIFKFGMAIGPFTMSDLAGNDIGLKIRKSLGLLDPNTRPRNERYHGGLGDRLCKAGRLGMKTGKGWYDYGPG-RKATASKEVAAIIDNYRNE-------------IGYAQKQ-----RKIDDQEVLERILYPLINTGFQCLEEGIASRPSDIDIIYIYGYGWPAYRGGPMYYADEIGLDVLLAGLTKYAAIHKNVSHWKPSALLQQLVRQKTSLAQYWANK 717          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: UPI000F6834F2 (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=2 Tax=Achromobacter denitrificans TaxID=32002 RepID=UPI000F6834F2)

HSP 1 Score: 231 bits (590), Expect = 7.260e-68
Identity = 126/255 (49.41%), Postives = 160/255 (62.75%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEETLA 765
            GK+ VLVG CDGFVGNRM+  Y+ EA FL+E+GA+P Q+D A + FG+A+GPL MAD+AG DISW  RK      P      QRYS + DRLCE+GR GQK+G+G+YRY AG R P +DPEV ALI+ C                   A E G +  R I++EEIV R  Y L+NE  R   EGIA R SDIDV++ HGY +P +RGGP+F+AD+     +   +  + A + D   WQPAPLL RLA S  + A
Sbjct:  465 GKLPVLVGVCDGFVGNRMVTPYTREAHFLLEEGATPAQVDGALQRFGLAMGPLRMADLAGLDISWAFRKRMAPSRPAH----QRYSRVADRLCEQGRFGQKSGRGFYRYAAGSREPLEDPEVLALIESC-------------------AGEDG-IARRTITDEEIVQRTLYALVNEAARILEEGIARRASDIDVIYVHGYGFPAFRGGPLFYADQQGVPAVLETVRGFHAQHGDA--WQPAPLLERLAASGRSFA 693          
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Match: A0A0Q8BQ36_9BURK (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Achromobacter TaxID=222 RepID=A0A0Q8BQ36_9BURK)

HSP 1 Score: 231 bits (589), Expect = 1.020e-67
Identity = 125/255 (49.02%), Postives = 160/255 (62.75%), Query Frame = 1
Query:    7 GKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGMAIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRMGQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGAAPEAGAVGPRQISEEEIVHRLFYPLINEGFR--REGIAERPSDIDVVWAHGYSWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADSEETLA 765
            GK+ VLVG CDGFVGNRM+  Y+ EA FL+E+GA+P Q+D A + FG+A+GPL MAD+AG DISW  RK      P       RYS + DRLCE+GR GQKTG G+YRYEAG RTP +DP+V ALID C  E                      V  R +S+EEIV R  Y L+NEG R   EGIA R SDIDV++ +GY +P  RGGP+F+A++   A +   + ++ AA+ ++  W+PAPLL RL     T A
Sbjct:  465 GKLPVLVGVCDGFVGNRMVSPYTREAHFLLEEGATPAQVDGALQRFGLAMGPLRMADMAGLDISWAFRKRMAPTRPAH----LRYSRVADRLCEQGRFGQKTGSGFYRYEAGSRTPVEDPDVLALIDTCARE--------------------DGVARRVVSDEEIVQRTMYALVNEGARILGEGIARRASDIDVIYVNGYGFPVHRGGPLFYAEQQGLAQVLATIRQFHAAHGEL--WRPAPLLERLVAQGRTFA 693          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11827.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G579_ECTSI2.410e-9958.78Enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme ... [more]
A0A835ZCY2_9STRA5.380e-9256.98Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=... [more]
D5X1H3_THIK13.660e-6950.583-hydroxyacyl-CoA dehydrogenase n=5 Tax=Thiomonas ... [more]
A0A2V6RMC1_9BACT1.500e-6849.403-hydroxyacyl-CoA dehydrogenase n=2 Tax=Candidatus... [more]
A0A7Y3J7F2_9GAMM1.960e-6850.793-hydroxyacyl-CoA dehydrogenase n=1 Tax=Steroidoba... [more]
A0A3C1XZT9_9BURK2.340e-6848.243-hydroxyacyl-CoA dehydrogenase (Fragment) n=2 Tax... [more]
A0A7X3TZZ1_9BACT3.760e-6850.403-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidobacte... [more]
A0A0H5QLN1_9EUKA4.460e-6848.28Enoyl-CoA hydratase n=1 Tax=Spongospora subterrane... [more]
UPI000F6834F27.260e-6849.413-hydroxyacyl-CoA dehydrogenase NAD-binding domain... [more]
A0A0Q8BQ36_9BURK1.020e-6749.023-hydroxyacyl-CoA dehydrogenase n=2 Tax=Achromobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11827contigP-wetherbeei_contig11827:601..2067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G579
Preferred nameFAO1
PFAMs3HCDH,3HCDH_N,ECH_1
Model size789
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.95e-100
EggNOG OGsCOG1024@1|root,KOG1683@2759|Eukaryota
Descriptionenoyl-CoA hydratase activity
Cds size789
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185927.500895-CDS-P-wetherbeei_contig11827:600..8431683185927.500895-CDS-P-wetherbeei_contig11827:600..843Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11827 601..843 -
1683185927.5146155-CDS-P-wetherbeei_contig11827:1222..16481683185927.5146155-CDS-P-wetherbeei_contig11827:1222..1648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11827 1223..1648 -
1683185927.5230787-CDS-P-wetherbeei_contig11827:1947..20671683185927.5230787-CDS-P-wetherbeei_contig11827:1947..2067Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11827 1948..2067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11827.2.1prot_P-wetherbeei_contig11827.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11827 601..2067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11827.2.1

>prot_P-wetherbeei_contig11827.2.1 ID=prot_P-wetherbeei_contig11827.2.1|Name=mRNA_P-wetherbeei_contig11827.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MPGKVAVLVGNCDGFVGNRMLRWYSDEAAFLMEDGASPRQIDAAARAFGM
AIGPLEMADVAGNDISWLIRKERGQLDPLKRDPAQRYSALGDRLCEKGRM
GQKTGKGWYRYEAGIRTPKDDPEVAALIDECRLERQQLLAERQQRQGNGA
APEAGAVGPRQISEEEIVHRLFYPLINEGFRREGIAERPSDIDVVWAHGY
SWPRWRGGPMFWADEMTPALLRRELERYGAANPDVAHWQPAPLLRRLADS
EETLAGYYARREV
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mRNA from alignment at P-wetherbeei_contig11827:601..2067-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11827.2.1 ID=mRNA_P-wetherbeei_contig11827.2.1|Name=mRNA_P-wetherbeei_contig11827.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1467bp|location=Sequence derived from alignment at P-wetherbeei_contig11827:601..2067- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGGTAAGGTAGCAGTGTTGGTGGGCAACTGTGACGGCTTCGTCGG GAACCGCATGCTCCGCTGGTACAGCGACGAGGCCGCGTTTTTGATGGAGG ACGGCGCGTCACCGCGGCAGGTAAAGTCGTTTGGTTTTGCTGTGGAATGG TGAGAGGCCTGTGGTCTGGTCTGTTTGTTACTTCCGTGTCTAGGGCTCGA ATTACGATATTCTGCCGTTCTTGAATGCAGGAAATATTCCTTCGGAATCC TTCGGAATGTGTTGGCCGTTCTTTCTCTCACTGCTTTCAGCATATTGTCG GCATCCCATCCTTGACTCGGTCCGACTTGTTCCTCTTGTGGGAAAGACAT TTCAAGCTGACATTTAGTAATCGTTACATCCCCGCCGAACCAAACTGGCC AAACTGCACCGTATCGCAGATTGACGCAGCGGCGCGGGCCTTCGGCATGG CGATCGGCCCCCTTGAGATGGCGGATGTCGCCGGCAACGACATCTCCTGG CTCATCCGCAAGGAGCGCGGCCAGCTGGACCCTTTGAAGAGGGACCCGGC GCAGCGCTACAGCGCTCTCGGGGACCGGCTGTGCGAGAAGGGGCGGATGG GGCAGAAGACTGGCAAGGGCTGGTACCGGTACGAGGCCGGCATCCGAACC CCGAAGGACGACCCCGAGGTGGCGGCGCTCATCGACGAGTGCCGGTTGGA GCGCCAGCAGCTGTTGGCGGAGCGGCAACAGCGGCAGGGGAATGGGGCGG CACCGGAAGCCGGAGCGGTGGGGCCTCGGCAGATCTCGGAGGAGGAGATC GTGCACCGGCTCTTCTACCCGCTGATCAACGAGGGCTTCAGGCGAGTGGT GGAAGGAGAGATGGCGCATTTGATGGTTTGTTCTTGTCGCGGCGGTTGCA GCCTTTTTCAGATGAGGGCTTCTCCTAAATGGTCATTACTTCAATCAAGA AGCTCTTGACAACTCTTTTATGTCGCGCTGTCGCGCCGTGCTGCCTTCTC ATCTACCTTTGGATTGCCGATTTACGGTATCGCGGTTTGCGGCATCCGCG GTGGCACTTGCGATGGTCTGCTACGACGACGGACGGCATTGCAATGCTGG CGTACTGGACGGCGGCGGCTCCGGCGGCGGCTCCGGCGGCGGCTCCGGCG GCGGCTCCGGCGGCGGCGATCTCTGCGGCGGTAATCCTGGCGGTTTTTGC CGGGGCACGAGCAGGATCCTGGAGGAGGGCATCGCGGAGCGGCCTTCCGA CATCGACGTGGTGTGGGCGCACGGCTACTCATGGCCCCGTTGGCGCGGCG GCCCCATGTTCTGGGCCGACGAAATGACGCCGGCGCTGCTGCGGCGCGAG CTCGAGCGTTACGGCGCCGCCAACCCGGACGTGGCGCACTGGCAGCCGGC GCCACTGCTTCGGCGGCTGGCCGACTCCGAGGAGACGCTGGCGGGGTACT ACGCGCGGCGCGAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11827:601..2067-

>mRNA_P-wetherbeei_contig11827.2.1 ID=mRNA_P-wetherbeei_contig11827.2.1|Name=mRNA_P-wetherbeei_contig11827.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig11827:601..2067- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGGTAAGGTAGCAGTGTTGGTGGGCAACTGTGACGGCTTCGTCGG
GAACCGCATGCTCCGCTGGTACAGCGACGAGGCCGCGTTTTTGATGGAGG
ACGGCGCGTCACCGCGGCAGATTGACGCAGCGGCGCGGGCCTTCGGCATG
GCGATCGGCCCCCTTGAGATGGCGGATGTCGCCGGCAACGACATCTCCTG
GCTCATCCGCAAGGAGCGCGGCCAGCTGGACCCTTTGAAGAGGGACCCGG
CGCAGCGCTACAGCGCTCTCGGGGACCGGCTGTGCGAGAAGGGGCGGATG
GGGCAGAAGACTGGCAAGGGCTGGTACCGGTACGAGGCCGGCATCCGAAC
CCCGAAGGACGACCCCGAGGTGGCGGCGCTCATCGACGAGTGCCGGTTGG
AGCGCCAGCAGCTGTTGGCGGAGCGGCAACAGCGGCAGGGGAATGGGGCG
GCACCGGAAGCCGGAGCGGTGGGGCCTCGGCAGATCTCGGAGGAGGAGAT
CGTGCACCGGCTCTTCTACCCGCTGATCAACGAGGGCTTCAGGCGAGAGG
GCATCGCGGAGCGGCCTTCCGACATCGACGTGGTGTGGGCGCACGGCTAC
TCATGGCCCCGTTGGCGCGGCGGCCCCATGTTCTGGGCCGACGAAATGAC
GCCGGCGCTGCTGCGGCGCGAGCTCGAGCGTTACGGCGCCGCCAACCCGG
ACGTGGCGCACTGGCAGCCGGCGCCACTGCTTCGGCGGCTGGCCGACTCC
GAGGAGACGCTGGCGGGGTACTACGCGCGGCGCGAGGTG
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