mRNA_P-wetherbeei_contig1181.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1181.1.1 vs. uniprot
Match: D8LBS9_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS9_ECTSI) HSP 1 Score: 293 bits (750), Expect = 2.030e-79 Identity = 366/983 (37.23%), Postives = 450/983 (45.78%), Query Frame = 1 Query: 10 EPWDCKACTFSNAHGGVTCEMCGTGR----ADGGADAASAVTRTDESDSYXXXXXXXXXXXXXXXXXXXXXXIDAEQQSRAEVAGAG-AGGGLSPQLLRKLAADRHFSLPGYLTELCHSLALAVAEAEAGMGRPSFDHAYIRVLLGVMDDV-PRLGADAPLLACRALNYMLQCGGSHVAEVGAQGGVAAYLRCLAHSSGAAAAAGPSARELGQEAISGVDLLCRSSIERFRELSDAGGGAGGLEVLTRFIEAAYPGGGAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGTAMADENKRXXXXXXXGPGAEKATAKALSLLRLLLDL--RWPAVPLGDL-----------------SPAGGATADGTVGVATVGTARTADGSAGLGGGGLLHLGTSGHCELDEVTSALLTVVRGAGDGNRETVLSLLGTKVAPRLLALGPNGHRPIAEASPWLTMLLVDPLLLPAAVSDLSPAASGSHLAALDLTYQIASASPSLCAFFLSDTCPLLPAVLGLL----------EAADDVEPAAGXXXXXXXXXXXXXXXXXXXXSKGGWAVETPRHGRSGSDAAGPXXXXASGGSRSGARRQRPA-LADADSAARSCLGLLRLAGLAGSILVDGRLPPTDTLT--------RLRRQNAPGIAAL----SLSXXXXXXXXXXXXXXPGSRTSGCSASTRTDSWLAEVEPEDGGVGGGADGVSNVVRAGGGSRA--ARRGRVLADLGDGTALVQLGTDTSEVIVSGARLREADGEAESFAARARRSLAR-----TLLAMVPDGGTADDDAGPLPPPDGANGNSG------------------------YXXXXXXXXXATLFLLYKLLRQFICSGNAGMVRRVLVDGADPNRPLPGGSTPLVTAVTHERAQS-ALDLCQALLEAGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQGRTPLEVSSDESVMAALTGHFESS 2718 E W C+ACTF N G +CEMCGT A G A S +YXXXXXXXXXXXXXXXXXXXXXX +A+ AG G A G++P LL +L+ D HFSL YLT+LCH+LALA AEAE G+ RP+ D A+I VLL +M D R G D PL ACRALNY LQ G + ++VG Q G+ Y C+ S+ A A +ELGQEA+SGVDLLCR+S E REL++ G GG VL F+ Y G AG A+ D XX AKALSLL L+L+L R P S T VG AD AG G EL + ALL V+RGA NRE L+ LG+KV PRL G WL L+ D LL AA+ D S ++ H AL LTYQ+ ++SP L + L CPL PAVL L +A+ G XXXXXXXXXXXXXXXX A TPR + P +G S G R R AD+++A RS L +LR+ GL + VDGRLP +L R PG A + XXXXXXXXXXXXXX R D L V GA + RAG G++ RR ++LADLGDGT LV E I++ R+ + S +RARRSLAR T++++ D G+ D D+ NG+ G XXXXXXX A +L L QFI SGNA +R VL GADPNR + G + L+ A HE + A+++ + LL+AGAD D G TPLEV +DE VM L E + Sbjct: 8 ETWACEACTFHNRVGASSCEMCGTPNPSMAAGGAGSTADGADDGSSSAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEAGDGTAEDGVTPALLSRLSRDGHFSLQNYLTKLCHTLALAAAEAETGLSRPNIDRAFIPVLLELMSDPGSRRGPDVPLQACRALNYFLQIGAA--SDVGVQRGMRTYALCITCSATAGTA---EYQELGQEAVSGVDLLCRTSAEFLRELAETDIGGGGGRVLASFVRGVYRSSGG--------------SRRGSVSASPVGHSPGGSGAGLAVEDRRNNRAGGAXXXXXXXXXXAKALSLLPLILELHPRPAGAPXXXXXXXXXXXXXXXXXXXXASVVSALQGKETAPTGVVGDDEHADADAG-----------DGDDELQAILEALLAVLRGASASNREVALATLGSKVLPRLGGAAAGGRE-------WLGELITDKDLLVAAIEDRSSRSAACHQRALGLTYQLLASSPELMSLALEPGCPLFPAVLDALGDGGGGGLGGDASGSRPGMDGSGSSXXXXXXXXXXXXXXXXXXXXXAPGTPR--------SAPRTPRLAGMSGDGRRMSRTGGAADSEAAGRSGLAVLRIVGLVAAAFVDGRLPKPSSLLLGSSGGGGRGTTGYTPGPAIMVQVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDQGLGGSAHSSALVSSGAS--ARRARAGSGAKENQERRAKLLADLGDGTVLVSWANTGVEEIIAARRVLLSSSN--SLTSRARRSLARNSLFRTMMSLGGDPGSGDSDS---------NGDGGGIDDDPLASFSLSALXXXXXXXXXXXXXXXXXARAEKSILNDFLGQFIQSGNATTLRHVLAGGADPNRLIRPGQSALMAAAAHEGGTATAIEMTRILLDAGADAGFVGPEGSALHAAAATGRGEVVSALIDAGADLEATDGDGCTPLEVCTDEPVMLMLAQALEDA 932
BLAST of mRNA_P-wetherbeei_contig1181.1.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.570e-41 Identity = 253/768 (32.94%), Postives = 324/768 (42.19%), Query Frame = 1 Query: 616 RELGQEAISGVDLLCRSSIERFRELSDAGGGAGGLEVLTRFIEAAY-PGGGAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGTAMADENKRXXXXXXXGPGAEKATAKALSLLRLLLDL--RWPAVPLGDL----------------SPAGGATADGTVGVATVGTARTADGSAGLGGGGLLHLGTSGHCELDEVTSALLTVVRGAGDGNRETVLSLLGTKVAPRLLALGPNGHRPIAEASPWLTMLLVDPLLLPAAVSDLSPAASGSHLAALDLTYQIASASPSLCAFFLSDTCPLLPAVLGLLEAAD------DVEPAAGXXXXXXXXXXXXXXXXXXXXSKGGWAVETPRHGRSGSDAAGPXXXXASGGSRSGARRQRPA-LADADSAARSCLGLLRLAGLAGSILVDGRLPPTDTLTRLRRQNAPGIAALSLSXXXXXXXXXXXXXXPGSRTSGCSASTRTD-----SWLAEVEPEDGG---------VGGGADGVSNVVRAGGGSRA--ARRGRVLADLGDGTALVQLGTDTSEVIVSGARLREADGEAESFAARARRSLAR-----TLLAMVPDGGTADDDAGPLPPPDGANGNSG-------------------YXXXXXXXXXATLFLLYKLLRQFICSGNAGMVRRVLVDGADPNRPLPGGSTPLVTAVTHERAQS-ALDLCQALLEAGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQGRTPLEVSSDESVMAALTGHFESS 2718 +ELGQEA+SGVDLLCR+S E REL++ G GG VL F+ Y GG+I+ +G +A E++R G GAE+A AKALSLL L+L+L R P S T +G AD AG G EL + ALL V+RGA NRE L+ LG+KV PRL G WL L+ D LL AA+ D S + H AL LTYQ+ ++SP L + L CPL PAVL L + D + X XXXXXXXXXXXXXXXXXX XXXX +G S G R R AD+++A RS L +LR+ GL + VDGRLP +L L G + P +RT G A+ D E G V GA + RAG G++ RR ++LADLGDGT LV + I++ R+ + S +RARRSLAR T++++ D G+ D D+ DGA + XXXXXXX A +L L QFI SGNA +R VL GADPNR + G + L+ A HE + A+++ + LL+AGAD D G TPLEV +DE VM L E + Sbjct: 20 QELGQEAVSGVDLLCRTSAEFLRELAETDIGGGGGRVLASFVRGVYRSSGGSISASPLGHSPG---------------------GSGAGLAAEDRRNNRAGGAGAGAEEAVAKALSLLPLILELHPRPAGAPXXXXXXXXXXXXXXXXXXXXSVVSALQGKETATTGVIGDDEHADADAG-----------DGDDELQAMLDALLAVLRGASASNREVALATLGSKVLPRLGGAAAGGRE-------WLGELITDKDLLVAAIEDRSLRGAACHQRALGLTYQLLASSPELMSLVLEPGCPLFPAVLDALGDSGGGGLGXDAXXSRPXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGMSGDGRRMSRTGGAADSEAAGRSGLAVLRIVGLVAAAFVDGRLPKPSSLL-LGSSGGGGRGTTGYTPGPAIMVQVLPENTP-TRTGGGVAAASGDLXXXXXXXXXXRREQGSGRQAHSSALVSSGAS--ARRTRAGSGAKENQERRAKLLADLGDGTVLVSW---ANTGIIAARRVLLSSSN--SLTSRARRSLARNSLFRTMMSLGGDPGSGDSDSNG----DGAGIDDDPLSSFSLSAXXXXXXXXXXXXXXXXXXARAERSILSDFLGQFIQSGNATTLRHVLAGGADPNRLIRPGQSALMAAAAHEGGTATAIEMTRILLDAGADAGFVGPEGSALHAAAATGRGEVVSALIDAGADLEATDGDGCTPLEVCTDEPVMLMLAQALEDA 735
BLAST of mRNA_P-wetherbeei_contig1181.1.1 vs. uniprot
Match: A0A836CMD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD4_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.040e-34 Identity = 137/412 (33.25%), Postives = 183/412 (44.42%), Query Frame = 1 Query: 292 KLAADRHFSLPGYLTELCHSLALAVAEAEAGMGRPSFDHAYIRVLLGVMDDVPRLGA-----DAPLLACRALNYMLQCGGSHVAEVGAQGGVAAYLRCLAHSSGAAAAAGPSARELGQEAISGVDLLCRSSIERFRELSDAGGGAGGLEVLTRFIEAAYPGGGAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGTAMADENKRXXXXXXXGPGAEKATAKALSLLRLLLDLRWPAVPLGDLSPAGGATADGTVGVATVGTARTADGSAGLGGGGLLHLGTSGHCELDEVTSALLTVVRGAGDGNRETVLSLLGTKVAPRLL-ALGPNGHRPIAEASPWLTMLLVDPLLLPAAVSDLSPAASGSHLAALDLTYQIASASPSLCAFFLSDTCPLLPAVLGLLEAADDVE 1509 +LAAD HFSL YLTELC LA+ VA AE+GMGRP+ D YIRVL+G++ A +APLLACRALNY L G S+ AEVG +GG+ A L CL S A S +EL QEA+ GVDLL RSS + R L + G G L ++ FI +AY G + +AG + E A A+ L LLRLLL+ W G + +AD V +D + +AL D + + + + +++P P G A+ L +LL+D LL AA+ S HL AL L Q+ S SP LC+ L+ +C LLP +L +LE D + Sbjct: 81 RLAADGHFSLATYLTELCQELAIGVAHAESGMGRPTVDAGYIRVLVGIVGARDAAAARSRSQEAPLLACRALNYFLTLGASYAAEVGDRGGLGALLHCL---SLACTGDTTSLQELAQEAVKGVDLLVRSSADNLRRLLEGGQG---LRIVCSFIASAYRKRGRVV----------------RMDSRDGPGVDDGSAAGAPPSS-------------ATEAAVARGLELLRLLLETSWHR--RGASATLNAVSADEVEAV------------------------------MDALCAALRNGRGDNKDAALQLLATRVAPRLSPSPSHTRPPPGQEGDGGAAGALGVLLLDEGLLVAAIRQRSAGDLACHLQALSLVTQLLSGSPELCSLALAPSCSLLPVLLSMLEDGGDAQ 425 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1181.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1181.1.1 >prot_P-wetherbeei_contig1181.1.1 ID=prot_P-wetherbeei_contig1181.1.1|Name=mRNA_P-wetherbeei_contig1181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=949bp MAEEPWDCKACTFSNAHGGVTCEMCGTGRADGGADAASAVTRTDESDSYWback to top mRNA from alignment at P-wetherbeei_contig1181:3781..6756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1181.1.1 ID=mRNA_P-wetherbeei_contig1181.1.1|Name=mRNA_P-wetherbeei_contig1181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2976bp|location=Sequence derived from alignment at P-wetherbeei_contig1181:3781..6756- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1181:3781..6756- >mRNA_P-wetherbeei_contig1181.1.1 ID=mRNA_P-wetherbeei_contig1181.1.1|Name=mRNA_P-wetherbeei_contig1181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2847bp|location=Sequence derived from alignment at P-wetherbeei_contig1181:3781..6756- (Phaeothamnion wetherbeei SAG_119_79)back to top |