prot_P-wetherbeei_contig11771.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11771.1.1
Unique Nameprot_P-wetherbeei_contig11771.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length248
Homology
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 150 bits (378), Expect = 1.270e-37
Identity = 109/305 (35.74%), Postives = 138/305 (45.25%), Query Frame = 0
Query:    3 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRA----------------------------------------------------------------------TIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRL 236
            TW   + +P GR  IG RWVF  K  ADG+I RYKARLVAQGF+Q PG++Y  TFA  +    +R  L +AA  D E+  +D  TAYLN  +   ++M+ P G   G + C    L K IYGLKQG  LW+  L + L+S GF+                                                                       T+ LSQ  Y  D+LA+F M+D  PV TP  PGA   S    P T AE A M   P    VGA++YLA  TRPDI + V +L R   NP +
Sbjct:  701 TWE-LAQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEYDETFASTLKWATLRTILAIAAIEDMEIECIDFSTAYLNGEIDKDVYMKQPEGFADGDQVCK---LGKGIYGLKQGGRLWYKKLAATLVSMGFKILRSDNSVYVLSNDTVNVVIPVFVDDCTLVSKDKAAIQKXKDELLKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYXXDILAKFXMADCRPVGTPLDPGAKL-STKMSPTTDAERASMKDIPYINAVGALMYLATATRPDIANTVSTLARFSSNPGM 1000          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A2N9FTY6_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FTY6_FAGSY)

HSP 1 Score: 141 bits (356), Expect = 7.970e-36
Identity = 96/246 (39.02%), Postives = 134/246 (54.47%), Query Frame = 0
Query:    2 QTWRRSSHVPHGR-NVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAALH----LLKAIYGLKQGAYLWHLCLRSWLLSDGFRAT--IRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPL------RELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 234
            QTW  +   PH + NV+G +WVF  KR ADG+I RYKARLVA+GF Q PG+DY  T++PV+    +R  L +A    + V Q+D+  A+L+  L++ ++M  PPG   F+    L+    L KAIYGLKQ    W   L S LL     +   + LSQ  YI D+L+R +M +A PV TP              A++   +   G P       R  VGA+ YL++T RPDI   V  L++ +H P
Sbjct:   68 QTW--ALVPPHPKQNVVGCKWVFRIKRHADGSIERYKARLVAKGFHQQPGIDYDETYSPVIKPTTVRTVLSIAISAGWSVQQIDIQNAFLHGKLSEDVYMTQPPG---FQHPQFLNHVCKLQKAIYGLKQAPRAWFSRLSSRLLDLVIPSPNGVLLSQQRYIKDILSRTKMLEAKPVNTPM-------------ASSTNLSAHEGEPFPDHTLFRSTVGALQYLSIT-RPDIAFAVNKLSQFMHKP 294          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A438CUN0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CUN0_VITVI)

HSP 1 Score: 143 bits (361), Expect = 2.350e-35
Identity = 93/259 (35.91%), Postives = 133/259 (51.35%), Query Frame = 0
Query:   10 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAAL--HLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIR------------------------LSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRLPDCLAA 242
            +P G   IG +W+F  KR ++G + RYKARLVA+GF+Q  G+D+  TF+PV   D+ R  + L A +D E+HQMDV TA+LN  + + ++M  P   F  ED   +   L K+IYGLKQ +  W+      ++S GF A +                         LSQ  YID +L R+ M ++ P  TP   G    S  + P  + E+ +M   P    VG+++Y  V TRPDI   V  L R + NP +    AA
Sbjct:  558 LPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSMKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPEN-FVSEDSKNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGRIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKG-DKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAA 814          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A5BEL1_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BEL1_VITVI)

HSP 1 Score: 143 bits (361), Expect = 2.460e-35
Identity = 90/229 (39.30%), Postives = 122/229 (53.28%), Query Frame = 0
Query:   10 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAAL--HLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRL 236
            +P G   IG  W+F  KR   G I+RYKARLVA+GF+Q  G+DY  TF+PV S D+ R  + L A +D E+HQMDV  A+LN  + + ++M  P   F   D   L   L ++IYGLKQ +  W+      +  D  R  + LSQ  YID +L+RF MS+  P  TP   G    S  + P    E   M   P    VG+++Y  V TRPDI      L + + NP +
Sbjct:  986 LPEGVKPIGCNWIFKTKRDLKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSNDSFRIIMALVAHYDLELHQMDVKIAFLNGNIDETIYMVQPEN-FESNDSKQLVCRLKRSIYGLKQASRQWYRKFDK-IYRDHSRGILGLSQNSYIDKVLSRFGMSNCTPGGTPVAKG-DKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYSFGMLGKYLSNPGM 1211          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A438F7Z9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F7Z9_VITVI)

HSP 1 Score: 142 bits (359), Expect = 2.480e-35
Identity = 92/259 (35.52%), Postives = 133/259 (51.35%), Query Frame = 0
Query:   10 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAAL--HLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIR------------------------LSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRLPDCLAA 242
            +P G   IG +W+F  KR ++G + RYKARLVA+GF+Q  G+D+  TF+PV + D+ R  + L   +D E+HQMDV TA+LN  + + ++M  P   F  ED   +   L K+IYGLKQ +  W+      ++S GF A +                         LSQ  YID +L R+ M ++ P  TP   G    S  + P  + E+ +M   P    VG+++Y  V TRPDI   V  L R + NP +    AA
Sbjct:  229 LPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVTHYDLELHQMDVKTAFLNGDIDETIYMVQPEN-FVSEDSKNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDEMCVSQFSGRIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKG-DKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAA 485          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A6G0WGN3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGN3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.600e-35
Identity = 103/303 (33.99%), Postives = 133/303 (43.89%), Query Frame = 0
Query:    2 QTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFG-FEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF---------------------------------------------------------------------RATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 234
            +TW     +P GR  IG RW+F KK +ADG++LRYKARLVAQGF+Q+ G+DY   FAPV+   ++RF L LAA     +  MDV TA+LN  L + L+MR PPG     +D     L K+IYGLKQ +  W+  L S+  S GF                                                                       +I   Q  YI DLLA    +D  P+ TP    A   S A  P            P R++VG +LYL  TTRPDI   V  L+R ++ P
Sbjct:  218 ETWT-LCELPPGRKPIGCRWLFTKKYSADGSLLRYKARLVAQGFTQVAGIDYTDIFAPVIRTSSIRFLLSLAALQSMHICHMDVQTAFLNGNLQETLYMRQPPGYVQPGQDHLVCRLNKSIYGLKQYSREWNSALDSYFKSKGFVQLKTGPCIYFQRTRQGLVLVGVYVDDFILLSTSRSVLETTKRNLSSRFHMKDLGNLAFCLGIEVERLQDGSIFFHQRKYILDLLATHGFTDCNPISTPQASSATRSSTASSPL-----------PFRQVVGELLYLTTTTRPDIAYTVTLLSRHLNEP 508          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A438EM71_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EM71_VITVI)

HSP 1 Score: 142 bits (359), Expect = 4.580e-35
Identity = 92/259 (35.52%), Postives = 134/259 (51.74%), Query Frame = 0
Query:   10 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAAL--HLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIR------------------------LSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRLPDCLAA 242
            +P G   IG +W+F  KR ++G + RYKARLVA+GF+Q  G+D+  TF+PV + D+ R  + L A +D E+HQMDV TA+LN  + + ++M  P   F  ED   +   L K+IYGLKQ +  W+      ++S GF A +                         LSQ  YID +L R+ M ++ P  TP   G    S  + P  + ++ +M   P    VG+++Y  V TRPDI   V  L R + NP +    AA
Sbjct:  571 LPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPEN-FVSEDSKNMICKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGRIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKG-DKFSLNQCPKNSLKSQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAA 827          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A438H0V6_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H0V6_VITVI)

HSP 1 Score: 142 bits (358), Expect = 6.090e-35
Identity = 91/231 (39.39%), Postives = 126/231 (54.55%), Query Frame = 0
Query:   11 PHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCA----ALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPH--YIDDLLARFRMSDAWPVQTP-SCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 234
            P   N++G +WVF  KR  DG+I RYKARLVA+GF Q PGVDY  TF+PV+    +R  L +A    + + Q+DV  A+L+  LT+ ++M  PPG   + D A       L KA+YGLKQ    W++ LR++LL+ GF  +  L   H  Y+ DLLA+F +       TP S  G  T +   PPA   +         R L+G + YL +T R DI   V  L + +H P
Sbjct:  919 PSNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLSIALSNGWSISQLDVNNAFLHGTLTEDVYMAQPPG---YVDQANPTHVCRLQKALYGLKQAPRAWYMELRTFLLTFGFINSKELFSVHSEYVRDLLAKFNLEGIKDSSTPMSSTGHLTLNDGSPPANATQ--------FRSLIGGLQYLQLT-RLDIAFAVNKLAQFMHAP 1137          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM)

HSP 1 Score: 141 bits (355), Expect = 6.780e-35
Identity = 107/299 (35.79%), Postives = 131/299 (43.81%), Query Frame = 0
Query:   10 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAA----LHLLKAIYGLKQGAYLWHLCLRSWLLSDGF----------------------------------------------------------------------RATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 234
            +P  R  IG RWVF  KR ADG++ RYKARLVA+GFSQ PG+++   FAP     A+R  L LAA  D E++ +D+ TA+LN  L   ++M  P G   FE+       L L+KAIYGLKQ    WH  L S L   GF                                                                      +  + LSQ  YI D+L RF MS+   V TP  P     S A  P    E A M   P R+LVGA++YLAV TRPDI   V  L R   NP
Sbjct:  144 LPSDRKTIGCRWVFKLKRKADGSVDRYKARLVAKGFSQRPGLEFSQVFAPTAKWAALRAILALAALEDLELYSIDISTAFLNGDLDHDVYMDQPEG---FEEYYGAGFVLKLVKAIYGLKQAGRQWHKKLDSVLKGMGFTLVRCDNSIWVYRREDVRIIIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKCLLSLSQRQYIIDILERFEMSNCTTVTTP-LPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNP 438          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 140 bits (352), Expect = 9.480e-35
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 0
Query:    3 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF 144
            TW  +   P G NV+G  WVF  KR A GAI +YKARLVAQGFSQ+PGVDY  TFAPV    ++R    LAA FD+E+HQMDV  AYLN  L + ++M+ PPG P   ++    HL K IYGLKQ    W+  L +  L  GF
Sbjct:   61 TWELAEKPP-GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGF 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4M1D7_9APHY1.270e-3735.74Integrase catalytic domain-containing protein (Fra... [more]
A0A2N9FTY6_FAGSY7.970e-3639.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438CUN0_VITVI2.350e-3535.91Retrovirus-related Pol polyprotein from transposon... [more]
A5BEL1_VITVI2.460e-3539.30Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A438F7Z9_VITVI2.480e-3535.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0WGN3_9STRA3.600e-3533.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438EM71_VITVI4.580e-3535.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A438H0V6_VITVI6.090e-3539.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A4S4KQ60_9AGAM6.780e-3535.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZVS1_9AGAM9.480e-3551.75Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 8..145
e-value: 8.3E-35
score: 120.5
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 5..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11771contigP-wetherbeei_contig11771:774..1517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11771.1.1mRNA_P-wetherbeei_contig11771.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11771 261..1517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11771.1.1 ID=prot_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
QQTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPG
VDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWM
RAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRL
SQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGN
PLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRLPDCLAAPLPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2