mRNA_P-wetherbeei_contig11771.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11771.1.1
Unique NamemRNA_P-wetherbeei_contig11771.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 150 bits (378), Expect = 3.770e-36
Identity = 109/305 (35.74%), Postives = 138/305 (45.25%), Query Frame = 1
Query:    7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRA----------------------------------------------------------------------TIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRL 708
            TW   + +P GR  IG RWVF  K  ADG+I RYKARLVAQGF+Q PG++Y  TFA  +    +R  L +AA  D E+  +D  TAYLN  +   ++M+ P G   G + C    L K IYGLKQG  LW+  L + L+S GF+                                                                       T+ LSQ  Y  D+LA+F M+D  PV TP  PGA   S    P T AE A M   P    VGA++YLA  TRPDI + V +L R   NP +
Sbjct:  701 TWE-LAQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEYDETFASTLKWATLRTILAIAAIEDMEIECIDFSTAYLNGEIDKDVYMKQPEGFADGDQVCK---LGKGIYGLKQGGRLWYKKLAATLVSMGFKILRSDNSVYVLSNDTVNVVIPVFVDDCTLVSKDKAAIQKXKDELLKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYXXDILAKFXMADCRPVGTPLDPGAKL-STKMSPTTDAERASMKDIPYINAVGALMYLATATRPDIANTVSTLARFSSNPGM 1000          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A6G0WGN3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGN3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.720e-34
Identity = 103/303 (33.99%), Postives = 133/303 (43.89%), Query Frame = 1
Query:    4 QTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFG-FEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF---------------------------------------------------------------------RATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            +TW     +P GR  IG RW+F KK +ADG++LRYKARLVAQGF+Q+ G+DY   FAPV+   ++RF L LAA     +  MDV TA+LN  L + L+MR PPG     +D     L K+IYGLKQ +  W+  L S+  S GF                                                                       +I   Q  YI DLLA    +D  P+ TP    A   S A  P            P R++VG +LYL  TTRPDI   V  L+R ++ P
Sbjct:  218 ETWT-LCELPPGRKPIGCRWLFTKKYSADGSLLRYKARLVAQGFTQVAGIDYTDIFAPVIRTSSIRFLLSLAALQSMHICHMDVQTAFLNGNLQETLYMRQPPGYVQPGQDHLVCRLNKSIYGLKQYSREWNSALDSYFKSKGFVQLKTGPCIYFQRTRQGLVLVGVYVDDFILLSTSRSVLETTKRNLSSRFHMKDLGNLAFCLGIEVERLQDGSIFFHQRKYILDLLATHGFTDCNPISTPQASSATRSSTASSPL-----------PFRQVVGELLYLTTTTRPDIAYTVTLLSRHLNEP 508          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Z0A825_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A825_9AGAM)

HSP 1 Score: 140 bits (352), Expect = 1.150e-33
Identity = 86/232 (37.07%), Postives = 123/232 (53.02%), Query Frame = 1
Query:    7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            TW+     P   N++G +WVF  KR A G I++YKARLVAQGFSQ+PGVD+  TFAPV    ++R    LAA F++E+HQMDV  AYLN  L + ++M+ PPG                                      F A  +  +  YID +LARF + D+ P+ T   P     +A + P+T  +  +M   P RE +G+++Y A+ TRPDI   V +L++ + NP
Sbjct:  113 TWK-LVEKPDRVNIVGSKWVFKIKRDAAGTIIKYKARLVAQGFSQIPGVDFTDTFAPVAKLSSIRILAVLAAHFNWELHQMDVKNAYLNGDLDEEIYMKQPPG--------------------------------------FPAPGQEHKRAYIDTILARFNLEDSKPLDTALDPSFQLTTA-QSPSTLQQYEEMRNVPYREAIGSLMYAALGTRPDIAYAVTTLSQFMQNP 304          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 140 bits (352), Expect = 2.240e-33
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF 432
            TW  +   P G NV+G  WVF  KR A GAI +YKARLVAQGFSQ+PGVDY  TFAPV    ++R    LAA FD+E+HQMDV  AYLN  L + ++M+ PPG P   ++    HL K IYGLKQ    W+  L +  L  GF
Sbjct:   61 TWELAEKPP-GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGF 202          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A060SII5_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SII5_PYCCI)

HSP 1 Score: 141 bits (355), Expect = 3.550e-33
Identity = 104/298 (34.90%), Postives = 137/298 (45.97%), Query Frame = 1
Query:   31 PHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFE----DCAALHLLKAIYGLKQGAYLWH--LCL--------RS-------------------------------------------------------WLLS-----DGFRATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            P   NV+G  W   KKR  +  +++YKARL AQGFSQ+ G+DY  T +P   A ++R  L LAA  D+EVHQ+D   AYLN  L + ++MR PPG   FE    +     LLKA+YGLKQ   LW+  +C         RS                                                       WLL      D  + TI LSQ  YID +LARFRM+DA PV   S P  P  +         E A+M   P  +L+G+++Y A+TTRPDI     +L R + +P
Sbjct:  398 PPNVNVVGAVWALRKKRDENNKVVKYKARLCAQGFSQVYGIDYTLTASPTARASSIRLILALAATHDWEVHQIDFKNAYLNGKLDETIYMRQPPG---FEVPGKERLIWRLLKALYGLKQAGLLWYRVICALMDEIGLTRSEYDPGVFYLFAPGIAIIIAIHVDDCVLVTNSKQLMVALKKQLEQRYEIVDLGEVRWLLGYEIRRDRSKRTISLSQGAYIDTMLARFRMTDAHPV---SVPLDPHTNLFNYTLDDDERAEMRNRPYAQLIGSLMYAAITTRPDISFATSTLARFMADP 689          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A6G0WQ29_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ29_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.850e-32
Identity = 99/296 (33.45%), Postives = 136/296 (45.95%), Query Frame = 1
Query:   28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPF--GFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR---------------------------------------------------------------------ATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            +P  R  IG RW+F KK AADG + RYKARLVAQGF+Q+ GVDY   FAPV+   ++RF L LAA +   +  MDV TA+LN  L + L+M+ PPG    G E+     L K+IYGLKQ +  W+  L S+  S  F                                                                       +I L Q  Y+ D+LA+  +++  PV TP      + SAA   ++++ +      P R +VG +LYL  TTRPDI   V  L+R ++NP
Sbjct:  220 LPPDRKPIGCRWIFTKKYAADGTLSRYKARLVAQGFTQVAGVDYTEVFAPVIRTSSIRFLLALAAMYSMHICHMDVQTAFLNGSLQETLFMKQPPGYVQPGSENLVC-RLNKSIYGLKQSSREWNSALDSYFKSQRFAQLKTDPCIYFRRTPQGLVLVGVYVDDFILLSTNVNILDSTKRALSSRFTMKDLGPLTYCLGIEVERLEDGSILLHQSKYVSDILAKHDLANCNPVSTPQ----DSHSAAFHSSSSSPSL-----PFRTVVGELLYLTTTTRPDIAFTVTLLSRHLNNP 505          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 137 bits (344), Expect = 1.170e-31
Identity = 94/292 (32.19%), Postives = 125/292 (42.81%), Query Frame = 1
Query:   28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR-------------------------------------------------------------------ATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            +P GR  +G +WVF  K  ADG + +YKARLVAQGF+Q  GVDY  TFAPV+    +R  + LAA+  +  HQMDV+TAYLN  L + ++MRAPPG    E      L KA+YGLKQ    W++ +  WL   G+                                                                    A I+L Q  Y+  +L R  + D   V  P   G  T  A        +  K   N     +GA+LY A  TRPDI   V++L+R +  P
Sbjct:  867 LPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYA--EGDKVCRLCKALYGLKQAGRTWYIKIDKWLKDQGYERIESDHGLYVRPIVQDTIIALYVDDVIILTKDERKLTEIKQALSTAFKMTDGGVLSSILGMQVTWESAHIKLDQSAYLQRILERNNLQDCKGVGAPMASGGITEGAEEVTLDAEQVTKYQSN-----IGALLYAARMTRPDIAFAVQNLSRHLKAP 1151          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Z0A072_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A072_9AGAM)

HSP 1 Score: 136 bits (343), Expect = 1.280e-31
Identity = 99/288 (34.38%), Postives = 140/288 (48.61%), Query Frame = 1
Query:    7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRA---------------------------TIRLSQPHYIDD----LLARFRMSDA----W--------------------PVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702
            TW+     P   N++G +WVF  K  A GAI++YKARL+AQGFSQ+PGVD+  TFA V    ++R  + LAA F++E+HQMDV  AYLN  L + ++M+ PPG P   ++     L K IYGLKQ    W+  L +  L  GF                             TI  +  + I D    L ARF M+D     W                    P+ T   P     +A + P+T  +  +M   P RE +G+++Y A+ TRPDI   V +L++ + NP
Sbjct:  376 TWK-LVEKPDCVNIVGSKWVFKIKCDAAGAIIKYKARLMAQGFSQIPGVDFTDTFALVAKLSSIRILVVLAARFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFPAPGQEHKVCALFKPIYGLKQAGRRWYKKLCAAFLGMGFTRSSVDHSVFFRHGAGSEIVLITVSVDDLTIAATSVNAITDVKDALNARFEMTDLGKMHWLLGIKIKHDRGGGGRSRCRSPLDTALDPSFQLTTA-QSPSTPQQYEEMCNVPYREAIGSLMYAALGTRPDIVYAVTTLSQFMQNP 661          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Y9ZX10_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZX10_9AGAM)

HSP 1 Score: 130 bits (326), Expect = 1.290e-31
Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 1
Query:   31 PHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR 435
            P G NVI  +WVF  KR   GAI +YKARLVAQGFSQ+PG+D+  TFAPV    ++R  + LAA F++E+HQMDV   YLN  L + ++M+ PPG P   ++    HL K IY LKQ  + W+  L +  L  GFR
Sbjct:  146 PAGTNVISSKWVFKIKRNNTGAISKYKARLVAQGFSQIPGIDFTDTFAPVAKLLSVRLVVALAAHFNYELHQMDVKNVYLNGDLKEEIYMKQPPGFPAPGQENKVCHLFKPIYELKQVEHHWYKKLCTAFLDMGFR 281          
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A5E8BTN4_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BTN4_9ASCO)

HSP 1 Score: 135 bits (339), Expect = 5.530e-31
Identity = 94/274 (34.31%), Postives = 133/274 (48.54%), Query Frame = 1
Query:   28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPH----------------YIDDLL-----------------ARFRMSDAWPV---------QTP----SCPGAPTRSAARPPATTAEAAKMAGNPL-RELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPR 705
            +P GR  I  +WVF  KR ADG+I RYKARLV  GFSQ+ G+DY  TFAPV+  + +R  L +AA+F F+VH MDV TA+LN  L + ++MR P G     ++    HL K++YGLKQ    W+  +   L+  GF   IR    +                Y+DDLL                 + F+M D  PV         Q+P    +C    T    R  +  +E+       + R ++G ++Y A   RPD+   V  L R + NP+
Sbjct: 1137 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGF---IRNESDYGVYTKGSGSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITNCSSVKTPLPTRDLSDFSESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPK 1407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4M1D7_9APHY3.770e-3635.74Integrase catalytic domain-containing protein (Fra... [more]
A0A6G0WGN3_9STRA8.720e-3433.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Z0A825_9AGAM1.150e-3337.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZVS1_9AGAM2.240e-3351.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SII5_PYCCI3.550e-3334.90Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WQ29_9STRA3.850e-3233.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5C3E5T1_9BASI1.170e-3132.19Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A4Z0A072_9AGAM1.280e-3134.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZX10_9AGAM1.290e-3149.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8BTN4_9ASCO5.530e-3134.31Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11771contigP-wetherbeei_contig11771:261..1517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog65672.G4TWW2
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve
Model size1102
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.35e-35
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3UY7N@5204|Basidiomycota,227R3@155619|Agaricomycetes,3H58M@355688|Agaricomycetes incertae sedis
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size744
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185925.5599506-UTR-P-wetherbeei_contig11771:260..5391683185925.5599506-UTR-P-wetherbeei_contig11771:260..539Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11771 261..539 -
1683185925.5700874-UTR-P-wetherbeei_contig11771:694..7731683185925.5700874-UTR-P-wetherbeei_contig11771:694..773Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11771 695..773 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185925.5791783-CDS-P-wetherbeei_contig11771:773..15171683185925.5791783-CDS-P-wetherbeei_contig11771:773..1517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11771 774..1517 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11771.1.1prot_P-wetherbeei_contig11771.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11771 774..1517 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11771.1.1

>prot_P-wetherbeei_contig11771.1.1 ID=prot_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
QQTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPG
VDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWM
RAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRL
SQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGN
PLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRLPDCLAAPLPEG*
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mRNA from alignment at P-wetherbeei_contig11771:261..1517-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11771.1.1 ID=mRNA_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig11771:261..1517- (Phaeothamnion wetherbeei SAG_119_79)
CAACAGACATGGCGCCGCTCGTCGCATGTTCCTCATGGTCGCAACGTCAT CGGCTACCGGTGGGTGTTTGCGAAAAAACGGGCCGCGGACGGAGCCATTC TGCGCTACAAAGCCCGGCTTGTGGCGCAGGGTTTTTCGCAGCTGCCGGGA GTGGACTACGGCGCAACGTTTGCGCCGGTCATGTCGGCTGACGCGATGCG GTTCACCCTTCCGCTGGCGGCGGAGTTTGACTTCGAAGTGCACCAGATGG ACGTGGTGACGGCATATCTCAATGCCCCGCTCACGGACCCCTTGTGGATG CGCGCGCCGCCCGGGCCTTTCGGCTTCGAGGACTGTGCGGCACTGCACTT GCTGAAGGCCATCTACGGCCTGAAGCAAGGGGCGTACCTTTGGCATCTCT GCCTGCGTTCTTGGCTTTTGAGCGACGGCTTTCGGGCAACTATCCGCCTA TCGCAGCCGCACTACATCGACGACCTGCTGGCGCGTTTCCGCATGAGTGA TGCCTGGCCAGTCCAGACACCATCTTGCCCCGGTGCCCCGACCAGGAGCG CGGCGCGGCCACCGGCAACGACGGCGGAAGCAGCGAAGATGGCGGGCAAT CCGTTGCGGGAGTTGGTCGGGGCGGTGCTCTACCTGGCCGTCACGACGCG GCCAGACATTTTTGACGAGGTGCGGTCGCTCACCCGCACCGTGCACAACC CCCGGCTCCCCGACTGTCTGGCTGCTCCGCTACCTGAAGGGTAGCCAGGA GAAGGGGCTGCTGTTTAGCCGGAGTGCTCCTGCCCGTATGGCGACGCCGG GGGCGGAAATTGGCTATGCCGATGTGGACTGGGCACGCGACATTGACCGC CGGCGGTCGGTTGGGGCGTATGTTTTCCTTCGGAGCAGCGCCGCCATCTC ATGGCGGTCCAAAATGCAGGACTGCACCGCTGCCTCCACTTGCGAGGCGG AGTACGTCGCCGCGCCTATGCCGTGCAGCATGCACTCTGGCTGCGGCGGC TGGCGCGTTGCCTCGGGCTCCAAGTGACGGCTGCCACGCCCATCCACGAA GACAATCAGCTCTGCTGCAAAGTCGCCGACAACCCCTTCATCGAACGTCG CGTGAAACACATCGACATCAAGTTTCACATAGTGCGGGAGCGGGTGGAGA GTGGAGAGGTGGTTTTGGTGCCCACCCCAGCAACAGAACAGCTGGCAGAT CTGTTGACCAAGCTACTGCCGGCCCCCCGCACGCGTTTTTTGCGGGAGCA GATATTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11771:261..1517-

>mRNA_P-wetherbeei_contig11771.1.1 ID=mRNA_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig11771:261..1517- (Phaeothamnion wetherbeei SAG_119_79)
CAACAGACATGGCGCCGCTCGTCGCATGTTCCTCATGGTCGCAACGTCAT
CGGCTACCGGTGGGTGTTTGCGAAAAAACGGGCCGCGGACGGAGCCATTC
TGCGCTACAAAGCCCGGCTTGTGGCGCAGGGTTTTTCGCAGCTGCCGGGA
GTGGACTACGGCGCAACGTTTGCGCCGGTCATGTCGGCTGACGCGATGCG
GTTCACCCTTCCGCTGGCGGCGGAGTTTGACTTCGAAGTGCACCAGATGG
ACGTGGTGACGGCATATCTCAATGCCCCGCTCACGGACCCCTTGTGGATG
CGCGCGCCGCCCGGGCCTTTCGGCTTCGAGGACTGTGCGGCACTGCACTT
GCTGAAGGCCATCTACGGCCTGAAGCAAGGGGCGTACCTTTGGCATCTCT
GCCTGCGTTCTTGGCTTTTGAGCGACGGCTTTCGGGCAACTATCCGCCTA
TCGCAGCCGCACTACATCGACGACCTGCTGGCGCGTTTCCGCATGAGTGA
TGCCTGGCCAGTCCAGACACCATCTTGCCCCGGTGCCCCGACCAGGAGCG
CGGCGCGGCCACCGGCAACGACGGCGGAAGCAGCGAAGATGGCGGGCAAT
CCGTTGCGGGAGTTGGTCGGGGCGGTGCTCTACCTGGCCGTCACGACGCG
GCCAGACATTTTTGACGAGGTGCGGTCGCTCACCCGCACCGTGCACAACC
CCCGGCTCCCCGACTGTCTGGCTGCTCCGCTACCTGAAGGGTAG
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