mRNA_P-wetherbeei_contig11771.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY) HSP 1 Score: 150 bits (378), Expect = 3.770e-36 Identity = 109/305 (35.74%), Postives = 138/305 (45.25%), Query Frame = 1 Query: 7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRA----------------------------------------------------------------------TIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPRL 708 TW + +P GR IG RWVF K ADG+I RYKARLVAQGF+Q PG++Y TFA + +R L +AA D E+ +D TAYLN + ++M+ P G G + C L K IYGLKQG LW+ L + L+S GF+ T+ LSQ Y D+LA+F M+D PV TP PGA S P T AE A M P VGA++YLA TRPDI + V +L R NP + Sbjct: 701 TWE-LAQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEYDETFASTLKWATLRTILAIAAIEDMEIECIDFSTAYLNGEIDKDVYMKQPEGFADGDQVCK---LGKGIYGLKQGGRLWYKKLAATLVSMGFKILRSDNSVYVLSNDTVNVVIPVFVDDCTLVSKDKAAIQKXKDELLKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYXXDILAKFXMADCRPVGTPLDPGAKL-STKMSPTTDAERASMKDIPYINAVGALMYLATATRPDIANTVSTLARFSSNPGM 1000
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A6G0WGN3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGN3_9STRA) HSP 1 Score: 141 bits (356), Expect = 8.720e-34 Identity = 103/303 (33.99%), Postives = 133/303 (43.89%), Query Frame = 1 Query: 4 QTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFG-FEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF---------------------------------------------------------------------RATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 +TW +P GR IG RW+F KK +ADG++LRYKARLVAQGF+Q+ G+DY FAPV+ ++RF L LAA + MDV TA+LN L + L+MR PPG +D L K+IYGLKQ + W+ L S+ S GF +I Q YI DLLA +D P+ TP A S A P P R++VG +LYL TTRPDI V L+R ++ P Sbjct: 218 ETWT-LCELPPGRKPIGCRWLFTKKYSADGSLLRYKARLVAQGFTQVAGIDYTDIFAPVIRTSSIRFLLSLAALQSMHICHMDVQTAFLNGNLQETLYMRQPPGYVQPGQDHLVCRLNKSIYGLKQYSREWNSALDSYFKSKGFVQLKTGPCIYFQRTRQGLVLVGVYVDDFILLSTSRSVLETTKRNLSSRFHMKDLGNLAFCLGIEVERLQDGSIFFHQRKYILDLLATHGFTDCNPISTPQASSATRSSTASSPL-----------PFRQVVGELLYLTTTTRPDIAYTVTLLSRHLNEP 508
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Z0A825_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A825_9AGAM) HSP 1 Score: 140 bits (352), Expect = 1.150e-33 Identity = 86/232 (37.07%), Postives = 123/232 (53.02%), Query Frame = 1 Query: 7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 TW+ P N++G +WVF KR A G I++YKARLVAQGFSQ+PGVD+ TFAPV ++R LAA F++E+HQMDV AYLN L + ++M+ PPG F A + + YID +LARF + D+ P+ T P +A + P+T + +M P RE +G+++Y A+ TRPDI V +L++ + NP Sbjct: 113 TWK-LVEKPDRVNIVGSKWVFKIKRDAAGTIIKYKARLVAQGFSQIPGVDFTDTFAPVAKLSSIRILAVLAAHFNWELHQMDVKNAYLNGDLDEEIYMKQPPG--------------------------------------FPAPGQEHKRAYIDTILARFNLEDSKPLDTALDPSFQLTTA-QSPSTLQQYEEMRNVPYREAIGSLMYAALGTRPDIAYAVTTLSQFMQNP 304
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 140 bits (352), Expect = 2.240e-33 Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGF 432 TW + P G NV+G WVF KR A GAI +YKARLVAQGFSQ+PGVDY TFAPV ++R LAA FD+E+HQMDV AYLN L + ++M+ PPG P ++ HL K IYGLKQ W+ L + L GF Sbjct: 61 TWELAEKPP-GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGF 202
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A060SII5_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SII5_PYCCI) HSP 1 Score: 141 bits (355), Expect = 3.550e-33 Identity = 104/298 (34.90%), Postives = 137/298 (45.97%), Query Frame = 1 Query: 31 PHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFE----DCAALHLLKAIYGLKQGAYLWH--LCL--------RS-------------------------------------------------------WLLS-----DGFRATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 P NV+G W KKR + +++YKARL AQGFSQ+ G+DY T +P A ++R L LAA D+EVHQ+D AYLN L + ++MR PPG FE + LLKA+YGLKQ LW+ +C RS WLL D + TI LSQ YID +LARFRM+DA PV S P P + E A+M P +L+G+++Y A+TTRPDI +L R + +P Sbjct: 398 PPNVNVVGAVWALRKKRDENNKVVKYKARLCAQGFSQVYGIDYTLTASPTARASSIRLILALAATHDWEVHQIDFKNAYLNGKLDETIYMRQPPG---FEVPGKERLIWRLLKALYGLKQAGLLWYRVICALMDEIGLTRSEYDPGVFYLFAPGIAIIIAIHVDDCVLVTNSKQLMVALKKQLEQRYEIVDLGEVRWLLGYEIRRDRSKRTISLSQGAYIDTMLARFRMTDAHPV---SVPLDPHTNLFNYTLDDDERAEMRNRPYAQLIGSLMYAAITTRPDISFATSTLARFMADP 689
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A6G0WQ29_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ29_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.850e-32 Identity = 99/296 (33.45%), Postives = 136/296 (45.95%), Query Frame = 1 Query: 28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPF--GFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR---------------------------------------------------------------------ATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 +P R IG RW+F KK AADG + RYKARLVAQGF+Q+ GVDY FAPV+ ++RF L LAA + + MDV TA+LN L + L+M+ PPG G E+ L K+IYGLKQ + W+ L S+ S F +I L Q Y+ D+LA+ +++ PV TP + SAA ++++ + P R +VG +LYL TTRPDI V L+R ++NP Sbjct: 220 LPPDRKPIGCRWIFTKKYAADGTLSRYKARLVAQGFTQVAGVDYTEVFAPVIRTSSIRFLLALAAMYSMHICHMDVQTAFLNGSLQETLFMKQPPGYVQPGSENLVC-RLNKSIYGLKQSSREWNSALDSYFKSQRFAQLKTDPCIYFRRTPQGLVLVGVYVDDFILLSTNVNILDSTKRALSSRFTMKDLGPLTYCLGIEVERLEDGSILLHQSKYVSDILAKHDLANCNPVSTPQ----DSHSAAFHSSSSSPSL-----PFRTVVGELLYLTTTTRPDIAFTVTLLSRHLNNP 505
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 137 bits (344), Expect = 1.170e-31 Identity = 94/292 (32.19%), Postives = 125/292 (42.81%), Query Frame = 1 Query: 28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPGPFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR-------------------------------------------------------------------ATIRLSQPHYIDDLLARFRMSDAWPVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 +P GR +G +WVF K ADG + +YKARLVAQGF+Q GVDY TFAPV+ +R + LAA+ + HQMDV+TAYLN L + ++MRAPPG E L KA+YGLKQ W++ + WL G+ A I+L Q Y+ +L R + D V P G T A + K N +GA+LY A TRPDI V++L+R + P Sbjct: 867 LPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYA--EGDKVCRLCKALYGLKQAGRTWYIKIDKWLKDQGYERIESDHGLYVRPIVQDTIIALYVDDVIILTKDERKLTEIKQALSTAFKMTDGGVLSSILGMQVTWESAHIKLDQSAYLQRILERNNLQDCKGVGAPMASGGITEGAEEVTLDAEQVTKYQSN-----IGALLYAARMTRPDIAFAVQNLSRHLKAP 1151
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Z0A072_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A072_9AGAM) HSP 1 Score: 136 bits (343), Expect = 1.280e-31 Identity = 99/288 (34.38%), Postives = 140/288 (48.61%), Query Frame = 1 Query: 7 TWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRA---------------------------TIRLSQPHYIDD----LLARFRMSDA----W--------------------PVQTPSCPGAPTRSAARPPATTAEAAKMAGNPLRELVGAVLYLAVTTRPDIFDEVRSLTRTVHNP 702 TW+ P N++G +WVF K A GAI++YKARL+AQGFSQ+PGVD+ TFA V ++R + LAA F++E+HQMDV AYLN L + ++M+ PPG P ++ L K IYGLKQ W+ L + L GF TI + + I D L ARF M+D W P+ T P +A + P+T + +M P RE +G+++Y A+ TRPDI V +L++ + NP Sbjct: 376 TWK-LVEKPDCVNIVGSKWVFKIKCDAAGAIIKYKARLMAQGFSQIPGVDFTDTFALVAKLSSIRILVVLAARFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFPAPGQEHKVCALFKPIYGLKQAGRRWYKKLCAAFLGMGFTRSSVDHSVFFRHGAGSEIVLITVSVDDLTIAATSVNAITDVKDALNARFEMTDLGKMHWLLGIKIKHDRGGGGRSRCRSPLDTALDPSFQLTTA-QSPSTPQQYEEMCNVPYREAIGSLMYAALGTRPDIVYAVTTLSQFMQNP 661
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A4Y9ZX10_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZX10_9AGAM) HSP 1 Score: 130 bits (326), Expect = 1.290e-31 Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 31 PHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFR 435 P G NVI +WVF KR GAI +YKARLVAQGFSQ+PG+D+ TFAPV ++R + LAA F++E+HQMDV YLN L + ++M+ PPG P ++ HL K IY LKQ + W+ L + L GFR Sbjct: 146 PAGTNVISSKWVFKIKRNNTGAISKYKARLVAQGFSQIPGIDFTDTFAPVAKLLSVRLVVALAAHFNYELHQMDVKNVYLNGDLKEEIYMKQPPGFPAPGQENKVCHLFKPIYELKQVEHHWYKKLCTAFLDMGFR 281
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Match: A0A5E8BTN4_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BTN4_9ASCO) HSP 1 Score: 135 bits (339), Expect = 5.530e-31 Identity = 94/274 (34.31%), Postives = 133/274 (48.54%), Query Frame = 1 Query: 28 VPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGVDYGATFAPVMSADAMRFTLPLAAEFDFEVHQMDVVTAYLNAPLTDPLWMRAPPG-PFGFEDCAALHLLKAIYGLKQGAYLWHLCLRSWLLSDGFRATIRLSQPH----------------YIDDLL-----------------ARFRMSDAWPV---------QTP----SCPGAPTRSAARPPATTAEAAKMAGNPL-RELVGAVLYLAVTTRPDIFDEVRSLTRTVHNPR 705 +P GR I +WVF KR ADG+I RYKARLV GFSQ+ G+DY TFAPV+ + +R L +AA+F F+VH MDV TA+LN L + ++MR P G ++ HL K++YGLKQ W+ + L+ GF IR + Y+DDLL + F+M D PV Q+P +C T R + +E+ + R ++G ++Y A RPD+ V L R + NP+ Sbjct: 1137 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGF---IRNESDYGVYTKGSGSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITNCSSVKTPLPTRDLSDFSESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPK 1407 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11771.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11771.1.1 >prot_P-wetherbeei_contig11771.1.1 ID=prot_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp QQTWRRSSHVPHGRNVIGYRWVFAKKRAADGAILRYKARLVAQGFSQLPGback to top mRNA from alignment at P-wetherbeei_contig11771:261..1517- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11771.1.1 ID=mRNA_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig11771:261..1517- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11771:261..1517- >mRNA_P-wetherbeei_contig11771.1.1 ID=mRNA_P-wetherbeei_contig11771.1.1|Name=mRNA_P-wetherbeei_contig11771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig11771:261..1517- (Phaeothamnion wetherbeei SAG_119_79)back to top |