mRNA_P-wetherbeei_contig11763.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: D7G7X5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X5_ECTSI) HSP 1 Score: 258 bits (658), Expect = 1.780e-71 Identity = 144/264 (54.55%), Postives = 172/264 (65.15%), Query Frame = 1 Query: 1117 SRHIFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPVDPDE--LEAPAMPGVPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVH--------------PEAFLVVPIRWAKQTLPGVERRYTVGVR-RGKGELAQLWKDMKRDTVSINGRVLQGGRGPEAIVGALTRCVLAQAAKAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINVYLVEPCVQIGGHG 1857 S+H+ EI V+G RR+W+ S + CR WV+AI AM ERPV+PDE L +P +P S M++YL+ R LR A +YL AL GL ++ + VP++W KQ LPG ER Y R RGK ELAQLWKDMKRDTVSINGRV+ G RGPE I+GALTRC+LAQA + S ++KLSEAQSLLAARD+LLAC+RTTS GDTYLVVDNLCRN LV LVPA EAEPL I V L Q+ G Sbjct: 24 SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETILGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGTGGGLQEGGEKDSSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQVQTQG 287
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A7S1VEQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VEQ9_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.040e-29 Identity = 97/264 (36.74%), Postives = 132/264 (50.00%), Query Frame = 1 Query: 1126 IFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPV----DPDELEAPAMPG--------VPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTLPGVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQGGRG--PEAIVGALT-------RCVLAQAAKAPFSAPVA-------KLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINVYLVEP 1833 IFE++V GG RR W +S + +AW+ AI AM+ + D D G V S D++ YL +++ +RGA D Y+ AL + L VP+ W +Q + + QLWKD+ RDTV +NG + QGG G PE I+GALT R ++ Q+ + F + ++SE Q+L ARDILLA NRT S GD+Y VD LCRN DLV P EAEPLQ+ + V P Sbjct: 432 IFELTVEGGPRRFWMANSRDERQAWIRAIQDAMMGKSAVSRGDEDHGGGAGAVGHNGRRPNTVNAKSPFKKDLEKYLRIQKDIRGATDKDTYVSALI-TKMGVGTSLKVPVIWIEQNSMFEDPDKIFKEEGVSSSVDQLWKDLFRDTVRVNGELFQGGSGHAPERIIGALTKEILSYDRSIMQQSGRVGFVNTASPNKRRKNEISEVQALAYARDILLAGNRTRSGGDSYYCVDALCRNADLVVATPRSAEAEPLQVKISQVVP 694
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A7S2U7T9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7T9_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.990e-29 Identity = 96/259 (37.07%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 1117 SRHIFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPVDPDE------LEAPAMPG--------VPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQ-------TLPGVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQGG--RGPEAIVGALTRCVLA--QAAKAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINV 1818 S IFE++V G+RRLW +S + AW+ A+ AMV + V E E+ A G +P S D+ YL V+ K++ A + YL +L P L VP++W ++ ++ G E V G + QLWKDM RD+VSING++ +G GPE I+GAL RC++ ++ + +++EAQ+L ARD+LLACNRT S GD+Y D LC N LV L P+ EA+P++I V Sbjct: 94 SGFIFELTV-SGSRRLWMANSKKEREAWIHAVRDAMVGKSVVRGESSLDYEYESEAKKGKSRRPGSSIPAQSPFKNDLIHYLKVQTKIKTARSKTHYLGSLKRCVGVP---LNVPVQWIREHVESSSSSITGAEAFREEDVSVG---MKQLWKDMLRDSVSINGKIYKGDDPHGPERIMGALARCIMRVDRSTEQAHIGDKHRITEAQALSYARDVLLACNRTRSGGDSYYCFDTLCNNSHLVALCPSSTEADPMKIVV 345
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: B7G2U9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2U9_PHATC) HSP 1 Score: 131 bits (330), Expect = 2.400e-28 Identity = 94/245 (38.37%), Postives = 134/245 (54.69%), Query Frame = 1 Query: 1114 PSRHIFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPV---DPDELEAPAMPGVPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTLPGVERRYT---VGVRRGKGELA--QLWKDMKRDTVSINGRVLQG--GRGPEAIVGALTRCVLAQAAKAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINV 1818 P+ IFE++ G RRLW +S +AW+ IN AMV + D + A+ GV S D++ YL ++ LR A SEY L L+ HP L VP+RW + R T V R L+ QLW+D++RD+V ING + G G GPE ++GALTR +L + + +L+E+Q++ ARDILL+ NRT S GD+Y ++LCRN +L +VP+ AEP+ I V Sbjct: 224 PNGAIFEMT-FSGTRRLWMANSRAERQAWMQTINAAMVGGSLTRSDSVTNHSGALRGVSPRSPFKNDLRLYLRMQHLLRTAKSQSEYTPHLQELSAHP---LTVPVRWIAKQQQAALRNATGEEVAFREEAVNLSVEQLWRDLQRDSVLINGELFMGASGHGPEKMMGALTRELLTVSDEGR-----GELNESQAVAYARDILLSGNRTRSGGDSYFCANSLCRNCELAVVVPSAAIAEPVSITV 459
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A7S4HSG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSG3_9STRA) HSP 1 Score: 120 bits (301), Expect = 9.590e-26 Identity = 89/227 (39.21%), Postives = 122/227 (53.74%), Query Frame = 1 Query: 1276 VPEGSHLAADMQAYLAVREKLRGAADISEYLLALA----------GLTVHPEA---------------------FLVVPIRWAKQTLP------GVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQGG--RGPEAIVGALTRCVLA--QAAKAPFSAPVA-----KLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINV 1818 VP S AD++ YLAV+ ++ A+ Y+ AL+ G +V P L VP++W K+ + GV GV G +AQLWKDM RD+V+ING +L+G GPE IVGALTR +++ ++A +AP + ++EAQS+ ARD+LLAC+RT S GD+Y VDNLC N DLV L P+ EAEPL+I V Sbjct: 3 VPSRSPYRADLEQYLAVQSAVKKASSREAYMRALSVLMLPGGAGGGGSVLPSPPSDLASQASDAGSAQSQPSGRSLNVPVQWIKEQVEVASGGDGVRAFREEGVSTG---IAQLWKDMSRDSVTINGELLKGDSPHGPECIVGALTRSIMSHDRSAAQNTAAPSSYRRKFAINEAQSVSYARDVLLACSRTRSGGDSYYCVDNLCSNSDLVVLCPSTAEAEPLKIEV 226
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A1E7ETM5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETM5_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.100e-25 Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 1 Query: 1126 IFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPVDPDELEAPAMPG-VPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTLP----GVERRYTVGV---RRGKGELAQLWKDMKRDTVSINGRVLQG--GRGPEAIVGALTRCVLAQAAKAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINVYLVE 1830 IFE+ V G RLW + + W+ AIN AM+ R ++ D G V S D++ YL ++ L+ + EY+ L L+ L +P+RW + L G TVG + QLW+D++RDT+ IN + G G GPE I+GALTR ++A +++ + E++++ ARDILL+ NRT S GD+Y +D L N DLV +VP+ +AEPL I V L E Sbjct: 185 IFELKV-GKFGRLWLARTKAERKKWLEAINDAMIGRSINQDSDNVHGRSGNVNSRSPYKDDLKLYLKIKANLKNSKSKKEYIDGLINLSGRDP--LNIPVRWIMEQLENKNNGRTEDNTVGAFVETSINSSVEQLWRDLRRDTIRINKELFLGDSGHGPEKIIGALTRDIVA-VSRSDSKYYRYAIPESKAVAYARDILLSINRTRSGGDSYFCIDTLTSNSDLVVIVPSSQQAEPLSITVELDE 425
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: K0TJJ1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJJ1_THAOC) HSP 1 Score: 121 bits (303), Expect = 1.470e-25 Identity = 85/237 (35.86%), Postives = 126/237 (53.16%), Query Frame = 1 Query: 1126 IFEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPVDPDELEAPAMPGVPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTL-----PGVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQGGRGPEAIVGALTRCVLAQAAKAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINVY 1821 +FE+ V GG +RLW S E AWV AI AM P + +PA +P+ S + + +R+ A EYL A+ + + L VP+ + K PG + V +LAQ+WKD++RD V +NGRVL G PE I+G+L +L++ ++E+Q++ ARD+LLAC+RT S+GD+YL +NLC N D+V L PA A+P+ I V+ Sbjct: 137 VFELRVKGGGKRLWMATSREDRAAWVEAIRRAMAGPPSAVVDGYSPAK-RLPDSSPYSM----FAVIRDATSSARSKEEYLQAIE---LMRDKSLQVPVNFVKVNYAALGSPGDHAQTDV-----TEDLAQMWKDLRRDFVDVNGRVLSGEPFPEPIMGSLALEILSRYHGND-------VTESQAVSCARDVLLACDRTKSSGDSYLCAENLCLNRDMVVLCPASTGAKPISIRVF 353
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: B8C5V8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5V8_THAPS) HSP 1 Score: 121 bits (304), Expect = 3.500e-25 Identity = 84/242 (34.71%), Postives = 128/242 (52.89%), Query Frame = 1 Query: 1129 FEISVIGGARRLWSVHSPEACRAWVTAINGAMVERPVDPDE------LEAPAMPG---VPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTLPGVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQGG--RGPEAIVGALTRCVLAQAA-KAPFSAPVAKLSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINV 1818 FE+SV GG RR+W ++P + W+ AI+ AM+ V + +E +P+ S +A ++ YL VRE + GA +YL AL+ L +++PI+W K L G + QLWKD+ RD+V ING+V+ G GP+ I+G LT+ ++ + + ++E Q++ ARDI+LA +RT S GD+Y ++NLC N DLV + P A PL I V Sbjct: 232 FELSVKGGPRRIWVANTPGERQGWIQAIHDAMIGASVVRGDNFLDYQMEHDGKTKRWTLPKNSPYSAFIEQYLQVREAINGAESKQDYLKALSILRGKS---IMIPIQWLKTQLDDSTPTAFQEADMSSG-VDQLWKDLLRDSVEINGQVISGESFHGPDRIIGNLTQLIIHHNQYNSCHDGKQSSITEVQAVSYARDIMLATDRTRSGGDSYYCIENLCLNRDLVVICPTSTVAAPLSITV 469
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A6U3S3W6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3W6_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.150e-24 Identity = 91/265 (34.34%), Postives = 135/265 (50.94%), Query Frame = 1 Query: 1123 HIFEISVIGGAR--RLWSVHSPEACRAWVTAINGAMVERPVDPDE--LEAPAMPG---------------VPEGSHLAADMQAYLAVREKLRGAADISEYLLALAGLTVHPEAFLVVPIRWAKQTLPGVERRYTVG-------VRRGKGELAQLWKDMKRDTVSINGRVLQG--GRGPEAIVGALTRCVLA--QAAKAPFSAPVAK---LSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINV 1818 ++FE+ V + RLW S E ++W+ AI+ AM+ V + L+ P VP S +++ YL V++ ++ A EY+ L+ L P L VP++W K+ + + V G ++QLWKDM RD+VSING + G G GPE I+G LTRC++ + + + V K ++E+ +L ARD+LL+CNRT S GD+Y VD LC N DLV L P+ AEPL + V Sbjct: 116 YVFELIVESDVKWKRLWMTSSKEDRQSWIHAIHEAMIGGSVTRGDNFLDYQIEPKKRTIMKKHDGGGDSIVPPNSPYKQNLEEYLRVQKGVKNATSKEEYVGMLSLLCGVP---LNVPVQWIKEHVETLSSSQNASKAFEEDSVSNG---ISQLWKDMLRDSVSINGDLFAGDSGHGPEQIIGELTRCIMKFDRMSLRNVDSNVMKKFRITESMALSYARDVLLSCNRTRSGGDSYYCVDTLCSNPDLVVLCPSSTVAEPLTVTV 374
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Match: A0A7S1ZZ15_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ15_TRICV) HSP 1 Score: 109 bits (272), Expect = 6.050e-24 Identity = 69/167 (41.32%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 1378 AGLTVHPEAFLVVPIRWAKQTLP------GVERRYTVGVRRGKGELAQLWKDMKRDTVSINGRVLQG--GRGPEAIVGALTRCVLAQAAKAPFSAPVAK-------LSEAQSLLAARDILLACNRTTSAGDTYLVVDNLCRNYDLVCLVPAGHEAEPLQINVYLVEP 1833 AG++ P L VP++W K+ + + + GV G + QL+KDM+RD+V ING + +G G GPE I+GAL+R ++ A + A ++EAQ++ ARD+LLACNRT S GD+Y VDNLC N DLV + P+ EAEPL+I V P Sbjct: 1 AGVSSCPGKSLNVPVQWIKEQVEVSSAANSEKAFHEEGV---AGCVTQLFKDMQRDSVIINGELYKGDSGHGPERIIGALSRSIIKHDRTAAQNIQAAAAFKRKFGITEAQAISYARDVLLACNRTRSGGDSYFCVDNLCSNQDLVVVCPSTAEAEPLRIQVRHTSP 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11763.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11763.1.1 >prot_P-wetherbeei_contig11763.1.1 ID=prot_P-wetherbeei_contig11763.1.1|Name=mRNA_P-wetherbeei_contig11763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=619bp DFLAEVERHEKATVTLKARSRYNGGGVETEDEWSDDDYDLDDGDDAGSTAback to top mRNA from alignment at P-wetherbeei_contig11763:227..2083+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11763.1.1 ID=mRNA_P-wetherbeei_contig11763.1.1|Name=mRNA_P-wetherbeei_contig11763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1857bp|location=Sequence derived from alignment at P-wetherbeei_contig11763:227..2083+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11763:227..2083+ >mRNA_P-wetherbeei_contig11763.1.1 ID=mRNA_P-wetherbeei_contig11763.1.1|Name=mRNA_P-wetherbeei_contig11763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1857bp|location=Sequence derived from alignment at P-wetherbeei_contig11763:227..2083+ (Phaeothamnion wetherbeei SAG_119_79)back to top |