mRNA_P-wetherbeei_contig11714.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.890e-96 Identity = 142/172 (82.56%), Postives = 157/172 (91.28%), Query Frame = 1 Query: 49 AVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 AVP NAN GCVG +S+ AGK S+CAGCP+Q ACASG A+ DP+V V+ RL+D+KHT+LVLSGKGGVGKST+ACQLAFALA++G QVGLLDVDICGPSVPRMLGL GQEVHQSAAGWSPVYVE+NLGVMSIGFMLPGSDDA+IWRGPRKNGLIKQFLTDVDWG LDYLVID Sbjct: 3 AVPANANAGCVGPQSDAAGKASACAGCPNQAACASGAAKQTDPSVAQVAARLADVKHTVLVLSGKGGVGKSTMACQLAFALASQGHQVGLLDVDICGPSVPRMLGLTGQEVHQSAAGWSPVYVEDNLGVMSIGFMLPGSDDAVIWRGPRKNGLIKQFLTDVDWGTLDYLVID 174
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: K3WSY8_GLOUD (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSY8_GLOUD) HSP 1 Score: 283 bits (724), Expect = 6.810e-93 Identity = 137/174 (78.74%), Postives = 156/174 (89.66%), Query Frame = 1 Query: 43 AGAVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 A AVP+NAN GCVG+ SE+AGK S CAGCP+QQ CASG+A+ PDPAV V +RL+ +KH +LVLSGKGGVGKSTVACQLAFALA +G QVGLLDVDI GPSVPRMLGLLGQEVHQSAAGWSPVYV++NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG+LDYL+ID Sbjct: 2 ATAVPDNANDGCVGLESEMAGKASGCAGCPNQQLCASGEAKKPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGKGYQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIID 175
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A8K1C2U6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2U6_PYTOL) HSP 1 Score: 278 bits (710), Expect = 9.900e-91 Identity = 134/172 (77.91%), Postives = 153/172 (88.95%), Query Frame = 1 Query: 49 AVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 +VP++AN GCVGV S+LAGK CAGCP+QQ CASG+AR PDPAV V +RL+++KH +LVLSGKGGVGKSTVACQLAFALA +G QVGLLDVDI GPSVPRMLGL+G EVHQSAAGWSPVYVE+NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG LDYL+ID Sbjct: 8 SVPKDANDGCVGVESDLAGKADGCAGCPNQQLCASGEARKPDPAVSDVRQRLANVKHKLLVLSGKGGVGKSTVACQLAFALAGKGYQVGLLDVDITGPSVPRMLGLMGHEVHQSAAGWSPVYVEDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGDLDYLIID 179
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A2P4YPZ7_9STRA (Nucleotide-binding protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YPZ7_9STRA) HSP 1 Score: 272 bits (696), Expect = 3.240e-90 Identity = 134/174 (77.01%), Postives = 149/174 (85.63%), Query Frame = 1 Query: 43 AGAVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 A + P NAN CVG +SE AGK CAGCP+Q CASG AR PDPAV V +RLS +KH +LVLSGKGGVGKSTVACQLAFALA +G QVGLLDVDI GPSVPRMLGLLGQEVHQSAAGWSPVYV++NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG+LDYL+ID Sbjct: 2 ATSAPSNANEQCVGPQSEQAGKADGCAGCPNQSLCASGAARQPDPAVSDVKQRLSGVKHKLLVLSGKGGVGKSTVACQLAFALAGKGYQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPDADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIID 175
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A2D4C3E6_PYTIN (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3E6_PYTIN) HSP 1 Score: 276 bits (705), Expect = 1.270e-89 Identity = 134/172 (77.91%), Postives = 150/172 (87.21%), Query Frame = 1 Query: 49 AVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 + P NAN GCVGV SE AG S CAGCP+Q+ CASG+AR PDPAV VS+RL+ +KH +LVLSGKGGVGKSTVAC LAFALA +G QVGLLDVDI GPSVPRMLGLLG EVHQSAAGWSPVYVE+NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG+LDYL+ID Sbjct: 3 STPSNANEGCVGVHSEQAGTASGCAGCPNQKLCASGEARKPDPAVSEVSQRLATVKHKLLVLSGKGGVGKSTVACHLAFALAGKGYQVGLLDVDITGPSVPRMLGLLGHEVHQSAAGWSPVYVEDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIID 174
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.540e-89 Identity = 133/171 (77.78%), Postives = 150/171 (87.72%), Query Frame = 1 Query: 52 VPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 +PENAN CVG +S AGK S+CAGCP+Q ACASG R+ DPA+ V++RL+ ++H ILVLSGKGGVGKST ACQLAF LAA+GKQVGLLD+DICGPSVPRMLGL GQEVHQS+ GWSPVYV + LGVMSIGFMLPG DDA+IWRGPRKNGLI+QFLTDVDWGQLDYLVID Sbjct: 10 IPENANQNCVGPQSTEAGKVSACAGCPNQSACASGAGRTEDPALKQVTDRLAQVRHKILVLSGKGGVGKSTFACQLAFTLAAKGKQVGLLDLDICGPSVPRMLGLTGQEVHQSSTGWSPVYVSDLLGVMSIGFMLPGQDDAVIWRGPRKNGLIRQFLTDVDWGQLDYLVID 180
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE) HSP 1 Score: 274 bits (701), Expect = 3.750e-89 Identity = 132/174 (75.86%), Postives = 152/174 (87.36%), Query Frame = 1 Query: 43 AGAVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 A +P NAN GCVG +E AGK + CAGCP++ ACASGK R DPAV V+ERLS +KH +LVLSGKGGVGKSTV+CQLAF+LAA+GKQVGLLD+DICGPSVPRMLGL G+EVHQS++GWSPV+V + LGVMSIGFMLP D+A+IWRGP+KNGLIKQFLTDVDWGQLDYLVID Sbjct: 19 ASGIPSNANEGCVGPAAEEAGKAAGCAGCPNKTACASGKGREVDPAVAEVAERLSGVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVID 192
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A0P1A892_PLAHL (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A892_PLAHL) HSP 1 Score: 273 bits (699), Expect = 4.180e-89 Identity = 132/172 (76.74%), Postives = 150/172 (87.21%), Query Frame = 1 Query: 49 AVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 +VP NAN CVG +SELAGK C+GCP+Q CASG AR PDPAV V +RL +KH +LVLSGKGGVGKST+ACQLAFALA++G QVGLLDVDI GPSVPRMLGLLGQEVHQSAAGWSPVYV++NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG+LDYL+ID Sbjct: 4 SVPANANEQCVGPQSELAGKVDGCSGCPNQSVCASGAARQPDPAVSDVKQRLKSVKHKLLVLSGKGGVGKSTIACQLAFALASKGFQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIID 175
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: M4BCU7_HYAAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCU7_HYAAE) HSP 1 Score: 269 bits (688), Expect = 1.820e-87 Identity = 129/174 (74.14%), Postives = 150/174 (86.21%), Query Frame = 1 Query: 43 AGAVPENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 A VP+NAN C+G ++ AGK CAGCP+Q CASG AR PDPA+ V +RL+++KH ILVLSGKGGVGKSTVACQLAFALA++G QVGLLDVDI GPSVPRMLGL+G EVHQSAAGWSPVYVE+NLGVMSIGFMLP +DDAIIWRGP+K+G+IKQFL DV WG+LDYL++D Sbjct: 2 APTVPDNANASCIGPQAAQAGKADGCAGCPNQTVCASGAARVPDPAISDVKQRLANVKHKILVLSGKGGVGKSTVACQLAFALASKGFQVGLLDVDITGPSVPRMLGLVGHEVHQSAAGWSPVYVEDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIVD 175
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Match: A0A6V1SZ98_HETAK (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SZ98_HETAK) HSP 1 Score: 270 bits (690), Expect = 2.220e-87 Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 1 Query: 55 PENANVGCVGVRSELAGKTSSCAGCPSQQACASGKARSPDPAVGVVSERLSDIKHTILVLSGKGGVGKSTVACQLAFALAARGKQVGLLDVDICGPSVPRMLGLLGQEVHQSAAGWSPVYVEENLGVMSIGFMLPGSDDAIIWRGPRKNGLIKQFLTDVDWGQLDYLVID 564 PENAN CVG +S+ AGK SCAGCP+Q+ACASG + DPAVG V++RL+ +KH +LVLSGKGGVGKST ACQLAF+LA RG QVGLLDVDICGPSVP MLGL+GQEVHQSA+GWSPVYV + LGVMSIGFMLP DDA+IWRGPRKNGLI+QFLTDVDWG LDYLV+D Sbjct: 10 PENANETCVGPQSDNAGKVDSCAGCPNQKACASGAPKQADPAVGQVADRLAQVKHKLLVLSGKGGVGKSTFACQLAFSLAKRGYQVGLLDVDICGPSVPTMLGLVGQEVHQSASGWSPVYVGDRLGVMSIGFMLPRQDDAVIWRGPRKNGLIRQFLTDVDWGHLDYLVVD 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11714.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11714.2.1 >prot_P-wetherbeei_contig11714.2.1 ID=prot_P-wetherbeei_contig11714.2.1|Name=mRNA_P-wetherbeei_contig11714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp METTNSAVPPPPPPAGAVPENANVGCVGVRSELAGKTSSCAGCPSQQACAback to top mRNA from alignment at P-wetherbeei_contig11714:937..2103+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11714.2.1 ID=mRNA_P-wetherbeei_contig11714.2.1|Name=mRNA_P-wetherbeei_contig11714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig11714:937..2103+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11714:937..2103+ >mRNA_P-wetherbeei_contig11714.2.1 ID=mRNA_P-wetherbeei_contig11714.2.1|Name=mRNA_P-wetherbeei_contig11714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig11714:937..2103+ (Phaeothamnion wetherbeei SAG_119_79)back to top |