prot_P-wetherbeei_contig11712.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11712.1.1
Unique Nameprot_P-wetherbeei_contig11712.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length104
Homology
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A7S3UWX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWX7_HETAK)

HSP 1 Score: 168 bits (426), Expect = 9.000e-52
Identity = 82/105 (78.10%), Postives = 88/105 (83.81%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRN-LPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            +++W LREYL  EF  L + LPF +DFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFL NVYKR LP MGGYLT PGG VNL +VD IL EVG IEDEVFR
Sbjct:   16 LELWTLREYLRAEFQCLESALPFEYDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLFNVYKRCLPGMGGYLTNPGGEVNLAHVDQILREVGAIEDEVFR 120          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A4D9CT15_9STRA (5'-3' exoribonuclease n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT15_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.370e-48
Identity = 84/104 (80.77%), Postives = 90/104 (86.54%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRNLPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            + I  LREYLE EF  LR+LPF ++FERVVDDFVFLCFFVGNDFLPHLPSLDIRDGA+DFL NVYKRVLPAMG YLT PGG VNL  VDIILAEVG +EDEVFR
Sbjct:  303 LHIPTLREYLEEEFRSLRDLPFGYNFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGAIDFLLNVYKRVLPAMGDYLTAPGGTVNLEQVDIILAEVGRVEDEVFR 406          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: W7TMF7_9STRA (5'-3' exoribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.950e-48
Identity = 84/104 (80.77%), Postives = 89/104 (85.58%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRNLPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            + I  LREYLE EF  LR LPF ++FERVVDDFVFLCFFVGNDFLPHLPSLDIRDGA+DFL NVYKRVLPAMG YLT PGG VNL  VDIILAEVG +EDEVFR
Sbjct:  303 LHIPTLREYLEEEFRSLRGLPFGYNFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGAIDFLLNVYKRVLPAMGDYLTAPGGTVNLEQVDIILAEVGRVEDEVFR 406          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A7S2HV30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV30_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.280e-45
Identity = 79/105 (75.24%), Postives = 90/105 (85.71%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRNL-PFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            ++I  LREYL+ EF  L  L PF +DFERVVDDFVFLCFFVGNDFLPHLP+LDIRDGA+DFL NVYKR+LP +G YLT+PGG VNL NVD++LAEVG IEDEVFR
Sbjct:  284 LEISTLREYLQAEFGTLETLLPFEWDFERVVDDFVFLCFFVGNDFLPHLPTLDIRDGAIDFLYNVYKRILPTLGDYLTKPGGVVNLANVDVVLAEVGAIEDEVFR 388          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A7S2V2V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2V3_9STRA)

HSP 1 Score: 153 bits (386), Expect = 7.280e-45
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGL-RNLPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            +Q+ VLR YL  EF  L   LPF ++FER +DDFVF+CFFVGNDFLPHLPSLDIRDGALD+L  VYKR LPAMGGYLT  GG V L +VD+IL EVG IEDEVFR
Sbjct:  100 LQVAVLRHYLRNEFKVLGETLPFPYEFERTIDDFVFMCFFVGNDFLPHLPSLDIRDGALDYLLAVYKRALPAMGGYLTNEGGEVVLEHVDVILKEVGSIEDEVFR 204          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: D7G4F2_ECTSI (5'-3' exoribonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.400e-44
Identity = 77/107 (71.96%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLR---NLPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            +Q+W LREYLE EF  L     +PF +DFERVVDDFVFLCFFVGNDFLPHLPSL IRDGALD+L NVYKRV+ ++G YLT  GGRVNL+ VD+I++EVGEIEDEVF+
Sbjct:  306 LQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFK 412          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 3.280e-44
Identity = 77/107 (71.96%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLR---NLPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            +Q+W LREYLE EF  L     +PF +DFERVVDDFVFLCFFVGNDFLPHLPSL IRDGALD+L NVYKRV+ ++G YLT  GGRVNL+ VD+I++EVGEIEDEVF+
Sbjct:  306 LQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFK 412          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A7S1UB78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB78_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.390e-44
Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRN---LPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            +++ VLREYL +EF  L     LPF +DFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGAL FL + Y+R+LPA+GG+LT  GG VNLR VD+ILAEVG++EDE+FR
Sbjct:  314 LRVPVLREYLRIEFQALSMPGALPFPYDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALLFLFDTYRRLLPAIGGFLTSEGGEVNLRGVDVILAEVGKVEDELFR 420          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A835YKU1_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU1_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.560e-43
Identity = 78/96 (81.25%), Postives = 85/96 (88.54%), Query Frame = 0
Query:   10 LEVEFAGLRN-LPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            L+ EFA L+  LPF +DFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVY+R LPA+G YLT PGG VNLR V +I+AEVGEIEDEVFR
Sbjct: 1072 LQAEFASLQGTLPFKYDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYRRKLPAIGDYLTLPGGEVNLRGVAVIMAEVGEIEDEVFR 1167          
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Match: A0A7R9U196_9STRA (5'-3' exoribonuclease n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U196_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.380e-42
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0
Query:    1 MQIWVLREYLEVEFAGLRN---LPFAFDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIEDEVFR 104
            ++I VLREYL++EF  L     LPF FDFER+VDDFVFLCFFVGNDFLPHLPSLDIRDGA+ FL + YKR+LPA+G YLT+ GG VNLR VD+ILAEVG++EDE+FR
Sbjct:  222 LRIPVLREYLKLEFGALSFPGVLPFPFDFERLVDDFVFLCFFVGNDFLPHLPSLDIRDGAIIFLLSAYKRLLPAIGDYLTKEGGDVNLRGVDVILAEVGKVEDELFR 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11712.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UWX7_HETAK9.000e-5278.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CT15_9STRA1.370e-4880.775'-3' exoribonuclease n=1 Tax=Nannochloropsis sali... [more]
W7TMF7_9STRA2.950e-4880.775'-3' exoribonuclease n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2HV30_9STRA1.280e-4575.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2V2V3_9STRA7.280e-4571.43Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D7G4F2_ECTSI1.400e-4471.965'-3' exoribonuclease n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JF35_9PHAE3.280e-4471.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UB78_9STRA8.390e-4471.03Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YKU1_9STRA1.560e-4381.25XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
A0A7R9U196_9STRA2.380e-4271.965'-3' exoribonuclease n=1 Tax=Pinguiococcus pyreno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041412Xrn1, helical domainPFAMPF17846XRN_Mcoord: 24..104
e-value: 6.6E-35
score: 120.9
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 2..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11712contigP-wetherbeei_contig11712:850..1161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11712.1.1mRNA_P-wetherbeei_contig11712.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11712 820..1161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11712.1.1 ID=prot_P-wetherbeei_contig11712.1.1|Name=mRNA_P-wetherbeei_contig11712.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp
MQIWVLREYLEVEFAGLRNLPFAFDFERVVDDFVFLCFFVGNDFLPHLPS
LDIRDGALDFLQNVYKRVLPAMGGYLTQPGGRVNLRNVDIILAEVGEIED
EVFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041412Xrn1_helical
IPR0270735_3_exoribonuclease