prot_P-wetherbeei_contig117.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig117.3.1
Unique Nameprot_P-wetherbeei_contig117.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1149
Homology
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A7S2P0C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P0C2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.520e-21
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  747 PSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVD 807
            P  CTY  +GG + EQHWYNCY+CGL+ ++GCC LC +VCH+ HDV YSR S+F CDCG +
Sbjct:   24 PRTCTYVETGGDFTEQHWYNCYTCGLVKDKGCCSLCAQVCHKGHDVGYSRRSSFFCDCGAE 84          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.490e-19
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 0
Query:  747 PSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAAGGDASGGSAPSTP 822
            P  CT+ ++ G Y++QHWYNC++CGL+ E+GCC+LC RVCH+ H+++YSRYS F CDCG    G D +  S P +P
Sbjct: 1873 PLSCTFMDTDGDYIQQHWYNCHTCGLVNEKGCCKLCTRVCHKGHELSYSRYSPFSCDCG----GKDHNASSEPDSP 1944          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A7S4IXK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXK0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.440e-18
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 0
Query:  744 ERTPSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAA 809
            +R    CT+  +GG + EQHWYNCY+CGL+ ++GCC LCV VCHR HDV YSR S+F CDCG + A
Sbjct:  837 DRVRRTCTFIETGGDFKEQHWYNCYTCGLLWDKGCCSLCVLVCHRGHDVGYSRKSSFFCDCGAEVA 902          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A7S2UH47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH47_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.860e-18
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  749 VCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAA 809
             CT+  +GG + EQHWYNCYSC L+ ERGCC +C +VCH+ HDV YSR+S+F CDCG + A
Sbjct:    3 TCTFVETGGEFFEQHWYNCYSCSLLWERGCCSICAQVCHKGHDVGYSRFSSFFCDCGAEHA 63          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A7S3Q419_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q419_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.720e-17
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0
Query:  742 GLERTPSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVD 807
            G +R  + C++  +GG + EQHWYNCY+CGL  ++GCC LC RVCH+ HDV YSR S+F CDCG +
Sbjct:  677 GKKRHQTTCSFKFTGGEFTEQHWYNCYTCGLTWDKGCCSLCARVCHKGHDVGYSRKSSFFCDCGAE 742          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 3.170e-17
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 0
Query:  747 PSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAAGG 811
            P VCT+ +S   ++ QHWY+CY+C L+ ++GCCRLC RVCHR HDV+Y+R S F CDCG   A G
Sbjct: 1860 PLVCTFVSSHKQFVNQHWYHCYTCNLVNDKGCCRLCARVCHRGHDVSYARLSCFFCDCGSSTAEG 1924          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: L1IUA6_GUITC (Uncharacterized protein n=5 Tax=Guillardia theta TaxID=55529 RepID=L1IUA6_GUITC)

HSP 1 Score: 98.2 bits (243), Expect = 9.150e-17
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  749 VCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAAGGDASGGSAP 819
            VCTY  +   + EQHWY+C++CGL+ + GCC +C +VCHR HDV YSRYS F CDCG     G      AP
Sbjct: 1580 VCTYIKTSNTFSEQHWYHCWTCGLVFQEGCCAVCAKVCHRGHDVTYSRYSRFFCDCGAGKRAGHTCSALAP 1650          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: F0Y2R4_AURAN (UBR-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2R4_AURAN)

HSP 1 Score: 98.2 bits (243), Expect = 9.380e-17
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 0
Query:  750 CTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDAAGGD 812
            CTYA SGG +++QHWYNC +CGL+G++GCC  C R CH  H+++YSR S+F CDCG    G D
Sbjct: 2071 CTYATSGGDFVDQHWYNCATCGLVGDKGCCSACARKCHAGHELSYSRKSSFFCDCGARGDGDD 2133          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A1Z5JDE4_FISSO (E3 ubiquitin-protein ligase UBR4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDE4_FISSO)

HSP 1 Score: 97.8 bits (242), Expect = 1.170e-16
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 0
Query:  743 LERTPSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGVDA-AGGDAS 814
            L   PSVCTY  +   + EQHWY C++CGL+G+RGCC LC  VCHR HDV+Y+R S+F CDCG +  + GD S
Sbjct: 1809 LATLPSVCTYV-AFSDFQEQHWYQCFTCGLVGDRGCCSLCALVCHRGHDVSYARKSSFFCDCGAEQPSNGDTS 1880          
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Match: A0A8J2S518_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S518_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.220e-16
Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:  747 PSVCTYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAFLCDCGV 806
            P+ CT+A++ GA++EQHWYNC +CGL+G++G C  C+R CH  HD++Y+R S+F CDCG 
Sbjct: 1907 PTKCTFASTSGAFVEQHWYNCATCGLVGDKGACAACIRTCHAGHDISYARKSSFFCDCGA 1966          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig117.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2P0C2_9STRA2.520e-2160.66Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A835Z9Y3_9STRA9.490e-1952.63E3 ubiquitin-protein ligase UBR4-domain-containing... [more]
A0A7S4IXK0_9STRA1.440e-1859.09Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2UH47_9STRA1.860e-1860.66Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3Q419_9STRA1.720e-1756.06Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
D8LLX0_ECTSI3.170e-1756.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
L1IUA6_GUITC9.150e-1752.11Uncharacterized protein n=5 Tax=Guillardia theta T... [more]
F0Y2R4_AURAN9.380e-1757.14UBR-type domain-containing protein n=1 Tax=Aureoco... [more]
A0A1Z5JDE4_FISSO1.170e-1656.16E3 ubiquitin-protein ligase UBR4 n=1 Tax=Fistulife... [more]
A0A8J2S518_9STRA1.220e-1655.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 748..810
e-value: 2.5E-11
score: 53.6
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 750..807
e-value: 5.2E-6
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1041..1060
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR21725:SF1E3 UBIQUITIN-PROTEIN LIGASE UBR4coord: 748..813
IPR045189E3 ubiquitin ligase UBR4-likePANTHERPTHR21725E3 UBIQUITIN-PROTEIN LIGASE UBR4coord: 748..813

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig117contigP-wetherbeei_contig117:3133..6579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig117.3.1mRNA_P-wetherbeei_contig117.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig117 3105..6579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig117.3.1 ID=prot_P-wetherbeei_contig117.3.1|Name=mRNA_P-wetherbeei_contig117.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1149bp
MQELMADAAAPRPDGGAGGSGGGAGAAIKALCAAAVTEYARASASPACAE
PERCRWRPYSGAAPAPVRRADGLDTWEFQLNRSLHATLLHAGASRGGGGR
QAGGCGSGGGGGGAAGADSAAMVADSDDEVAPASPADAGEGAAAAAAAAA
TDAAEEPPRDAAAELRAAFGREGSELSASARAVAEFAFSAMLTLLVATSE
HPGAATAAGASEGGGAVGASLEAAVELCGECMSDEWLQSMRSRAQKVLEL
LLDRVIDPAPAIAAEVGGAGSGGGGSAAGRADGMAAAWLIKGADDIVHAS
LLMLRLSPTGGLDGDPPAVAAAVRKFHRRCAAAILGTGLALVQRYLDNAR
HRAAVLAFYAGQPPPSIADEGSNRGTDGGGGGGGGGGGSGSVGSMARLLA
AAIAPRGDVAASLLAVLLDGRLSGRHRQAMSIIESMLRPAAAAAAGGGAA
AKAQSVGVGAAAEVAAAVAAALLSWPTGDLEGFVQLAVCGDDRGYGAEGA
SQEGEEAERDGEPWGDEAAVDSGTAWERSAAALSLLALLLGYDGYSPERP
HAHDSALGRRVFDIALNLAPEWTTLLPAELYSMPIESEGKREGEGGGCGG
GVATAPPGPAELVVFLASTLQLLPLLVQTLRLMVTDISEGDLTGEHGDEE
DAAADAAALANVLALMDGVLDPCGPPLPPLEADDTVLQAQAAAAAAAAAA
TTAAVQQRWAGGLDAASDEEAAAVASGGVAADDKDGRRPAPGLERTPSVC
TYANSGGAYLEQHWYNCYSCGLIGERGCCRLCVRVCHRDHDVNYSRYSAF
LCDCGVDAAGGDASGGSAPSTPGSNPNTPPTAPPALSSGAIDNDDGDGGV
DGGGDGGDGDGGGDGGGDGGVDGSRILVDHRTGELLGGGGHLGGPDGDAN
PGRNGCKCLRRNAHRDGQRFGGALLNEVDGGSSQATAALTALATAAELGA
RKKPAAAGLEHNGGGGGAAAGGDARIIAMPPRLHFRAVWTENQRAEVCRM
LGCGGDAATAFNGGAAPAPTASVAMPAAAAAMDVEGGDSEAKGGNAAAMD
VDGGGESGAGSGADGGLLSSLEATFGWLCSKLPASIGMPGSSHHAPSGVG
VAFGAPWSALWNAETATAGLAAERGSQLVAARTESLLMPLRLVKPGTVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR045189UBR4-like