mRNA_P-wetherbeei_contig11685.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: D7FMM2_ECTSI (GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2_ECTSI) HSP 1 Score: 188 bits (478), Expect = 7.630e-55 Identity = 86/152 (56.58%), Postives = 117/152 (76.97%), Query Frame = 3 Query: 363 TAAAMWAWIVSFPITIATFSRV-AAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 T AMWAW+VS P+T+A FS A P+G+ G G AVETVADYQKF FKN P+N +++ +GL+S+ R+PNYLGEM VWW++LG ALP LRGP ++ALGFASPAF+T+L+++VSG+PMLEQQH+++YG +P +RE+ TP ++P Sbjct: 153 TIQAMWAWVVSLPVTLANFSPARAVPMGVGGWACLGLAATGLAVETVADYQKFQFKNDPDNKGKFMTSGLWSLSRHPNYLGEMGVWWAILGVALPALRGPGRVALGFASPAFITALIMYVSGVPMLEQQHDEKYGGDPRYREWKENTPMILP 304
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A835Z1P4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P4_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.540e-41 Identity = 72/150 (48.00%), Postives = 104/150 (69.33%), Query Frame = 3 Query: 372 AMWAWIVSFPITIATFSRVAAP--LGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 A WAW+VS P+T+A F+ VA+ LG+ G++A F GFA E +AD+QK FK P N +WID G++SV R+PNY GE+++W SL A++P LRGP Q+ +G SP F++ L+L+VSGIP+LE + K +G++ + +Y TP LVP Sbjct: 144 AAWAWVVSLPVTMANFNPVASTQRLGMGGRVALLTFAGGFAFEAIADWQKRSFKKNPANKGKWIDQGVWSVSRHPNYFGELLIWSSLFFASVPALRGPRQVLIGAVSPLFISGLILYVSGIPLLEDKMNKDHGQDEKYLKYKETTPLLVP 293
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A0G4EDP8_VITBC (S5A_REDUCTASE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDP8_VITBC) HSP 1 Score: 142 bits (359), Expect = 1.040e-36 Identity = 70/164 (42.68%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 363 TAAAMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFV----------FKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLR---GPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 TA +W W+ P T+A +S+ A L W A F +GFA ET+AD QK+ K K + +W+D GL+ +CRYPNY GE+ VW L A+P L GP +ALG SPAF++SLLLFVSG+P+ E++ +KR+G +P ++EY TP ++P Sbjct: 191 TAQTVWCWLSLLPSTVAVYSKAATSLTRWDAFGIALFSLGFAFETIADNQKWAKKQREMKGEAAKGKGDKAAKWMDEGLWRLCRYPNYFGEICVWSGLYAVAVPALYQAYGPKMVALGALSPAFVSSLLLFVSGVPLAEKRADKRFGDDPQYQEYKKSTPLIIP 354
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: I0YVW6_COCSC (DUF1295-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVW6_COCSC) HSP 1 Score: 140 bits (352), Expect = 1.980e-36 Identity = 76/152 (50.00%), Postives = 104/152 (68.42%), Query Frame = 3 Query: 363 TAAAMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGP-AQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 TA ++W WIV PIT++ AAPLG G +A AGF GFA+ETVAD QKF FK+ + D+++D+GL+++CR+PNY GE+++W SL L G A+ ASPAF LLL+VSGIP LE+ HEKRYG++ A+++Y A T L+P Sbjct: 129 TAQSLWGWIVLLPITVSQTLTPAAPLGPLGWIAAAGFLAGFAIETVADLQKFYFKSA--HPDKFMDSGLFALCRHPNYFGEILLWTSL--TVLAGTHGVFAKHPWIIASPAFTIFLLLYVSGIPTLEKSHEKRYGKDAAYKDYKASTNLLLP 276
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A841RBT5_9SPIO (Steroid 5-alpha reductase family enzyme n=1 Tax=Spirochaeta isovalerica TaxID=150 RepID=A0A841RBT5_9SPIO) HSP 1 Score: 133 bits (335), Expect = 4.460e-34 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 384 WIVSFPITIATFSRVAAPLGLW-GKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 W++ P+T R P L+ + F F IGF +E+++D+QKF FKN +N WI+ GL+ R+PNY GEM+VWW L AA+P L G L + P F+T LLLFVSGIP+LE+ EK+YG NP +R Y RT L+P Sbjct: 117 WVIMLPVTFFLTVRE-VPFNLYLHSIGFVLFAIGFIIESISDHQKFRFKNNEKNKGLWIENGLWKYSRHPNYFGEMLVWWGLFIAAIPALGGLKILTV--MGPVFITLLLLFVSGIPLLEKSAEKKYGGNPLYRSYRDRTSLLIP 258
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: UPI000D1D0756 (uncharacterized protein LOC9647142 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0756) HSP 1 Score: 133 bits (334), Expect = 1.010e-33 Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 372 AMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 A W W VS P+TIA S + PL + + + G +E +DYQK FK +N D+W D G +SV R+PNY GEM++WW + AA P+ RG A+ P FL ++LLF+SG+P+LE +K+YG NP++R Y T L+P Sbjct: 112 AAWVWTVSLPVTIANASDMDPPLEARDAIGWFLWICGIVIEMTSDYQKLKFKEDMDNRDKWCDIGFWSVSRHPNYFGEMLLWWGIFAAASPVFRGGQWAAI--FGPLFLMAILLFLSGLPLLEASADKKYGSNPSYRMYKETTSPLIP 257
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A0D3CB53_BRAOL (S5A_REDUCTASE domain-containing protein n=33 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3CB53_BRAOL) HSP 1 Score: 133 bits (334), Expect = 1.060e-33 Identity = 68/153 (44.44%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 363 TAAAMWAWIVSFPITIATFS---RVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALV 812 T A+W W VS P+T+ S R+ P + G F GF VE +AD QK +FKN+ EN RW D GL+ R+PNY GEM++WW + A+LP+L+G L + P FLT LL FVSGIP+LE+ +K+YG A+R Y T L+ Sbjct: 109 TLQAVWVWTVSLPVTLVNASNGGRLFQPADVIGWTMFVA---GFLVEAIADQQKLLFKNRQENKGRWCDVGLWKFSRHPNYFGEMLLWWGIYVASLPVLKGAEYLVI--VGPIFLTLLLFFVSGIPLLEESADKKYGNLGAYRHYKKTTSPLI 256
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A446R8L9_TRITD (S5A_REDUCTASE domain-containing protein n=7 Tax=Pooideae TaxID=147368 RepID=A0A446R8L9_TRITD) HSP 1 Score: 131 bits (329), Expect = 1.420e-33 Identity = 65/148 (43.92%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 372 AMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 A+W W VS P+TI S + + + + IG AVE +AD QK FKN P N +W + GL+S R+PNY GEM +WW + A+ P+L G L + P FLT LLLFVSGIP+LE +KR+GR+ +R Y T L+P Sbjct: 55 AVWVWTVSLPVTIVNASSRNPSIEARDIIGWIMWAIGLAVEAIADQQKLKFKNSPSNRGKWCNVGLWSYTRHPNYFGEMFLWWGVFVASAPVLSGAEWLVI--LGPIFLTLLLLFVSGIPLLESSADKRFGRSEEYRTYKKTTSPLIP 200
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A8J7X5_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J7X5_CHLRE) HSP 1 Score: 129 bits (325), Expect = 2.720e-33 Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 363 TAAAMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 T A+W ++ P+ R PLG L A +G+G A+E AD+QK +K++PEN R+ID GL+S+ R+PNY GEM++WW + P G A + ASP + LL +VSG+P+LEQ E+R+G PAF+EY ART L+P Sbjct: 48 TMQAVWVFVSLLPVLCINGGRAPVPLGPLDMLGIAVYGLGMALEVTADWQKAAWKSRPENKGRFIDEGLWSLSRHPNYCGEMMIWWGVFLTCAPGF-GAAWQYVSVASPVVVMLLLRYVSGVPLLEQMGEQRWGTEPAFQEYKARTNLLLP 197
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Match: A0A835XRS5_9CHLO (S5A_REDUCTASE domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XRS5_9CHLO) HSP 1 Score: 133 bits (335), Expect = 3.580e-33 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 351 MIDGTAAAMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVADYQKFVFKNKPENTDRWIDTGLYSVCRYPNYLGEMIVWWSLLGAALPLLRGPAQLALGFASPAFLTSLLLFVSGIPMLEQQHEKRYGRNPAFREYVARTPALVP 815 ++ TA A+W ++ S P+ I PLG + + +GF E VAD QK VFK KPEN R+ID GL+S+ R+PNY GEM++WW + P P LA SP F L+ FVSG+P+LE+ E+R+G+ PAF+EY ART L+P Sbjct: 202 LVAWTAQAVWVFLTSLPVLIINGMPSTRPLGPIDAIGITVWAVGFLTEVVADRQKAVFKAKPENKGRFIDEGLWSLSRHPNYFGEMMLWWGVFLTCAPGFSSPWHLA-SVVSPVFTFLLIRFVSGVPLLEKMGEQRWGQEPAFQEYKARTNMLLP 355 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11685.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11685.2.1 >prot_P-wetherbeei_contig11685.2.1 ID=prot_P-wetherbeei_contig11685.2.1|Name=mRNA_P-wetherbeei_contig11685.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MIDGTAAAMWAWIVSFPITIATFSRVAAPLGLWGKLAFAGFGIGFAVETVback to top mRNA from alignment at P-wetherbeei_contig11685:623..1902- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11685.2.1 ID=mRNA_P-wetherbeei_contig11685.2.1|Name=mRNA_P-wetherbeei_contig11685.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1280bp|location=Sequence derived from alignment at P-wetherbeei_contig11685:623..1902- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11685:623..1902- >mRNA_P-wetherbeei_contig11685.2.1 ID=mRNA_P-wetherbeei_contig11685.2.1|Name=mRNA_P-wetherbeei_contig11685.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig11685:623..1902- (Phaeothamnion wetherbeei SAG_119_79)back to top |