prot_P-wetherbeei_contig11683.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig11683.1.1
Unique Name	prot_P-wetherbeei_contig11683.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	217

Homology

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A6I1QWB8_9CHLR (DNA ligase (ATP) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I1QWB8_9CHLR)

HSP 1 Score: 299 bits (766), Expect = 1.010e-98
Identity = 143/219 (65.30%), Postives = 170/219 (77.63%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQI--QPVAPLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M LP+QPPI+PMLA L+R+ P   GW+YEPKWDGFRA+VFWDGDE+ IQSRD KPL RYFPEL + L   LP G V+DGE+VI G DGLDF++LL RIHPA SR+ KLA ETP+SFVAFDLLA   N LM  P A+RR+ L +I   P  PL+LTP+T D  TA  WFERFEGAGLDGVI +K DL Y PD+R +VK+KHQRTA+ +VGGFRW + +EG
Sbjct:    1 MKLPVQPPIKPMLAALAREMPPPNGWLYEPKWDGFRAIVFWDGDEMLIQSRDLKPLGRYFPELEESLRGVLPPGVVVDGEVVIAGPDGLDFDSLLQRIHPAESRVRKLAAETPSSFVAFDLLAAGDNDLMALPQAKRRQRLQEILGDPAPPLYLTPSTSDPATAGDWFERFEGAGLDGVIVRKDDLPYLPDQRSLVKVKHQRTADCMVGGFRWNRGEEG 219

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A535PH25_9CHLR (DNA ligase (ATP) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535PH25_9CHLR)

HSP 1 Score: 280 bits (716), Expect = 6.060e-91
Identity = 142/219 (64.84%), Postives = 162/219 (73.97%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQI--QPVAPLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M LP QPPIEPMLA LS  FPE +GW++EPKWDGFRA+VF DGDE+Y QSRD KPL RYFPEL + L   LP   V+DGE+VI GE GLDFEALLLRIHPAASR++ LA ETPASFVA+DLLAE    L D+P A RR  L  +       + LTPATRD  TA  WF+RFEGAGLDGVIAK+ D  Y P +R M+K+KHQRTA+ VV GFRW K   G
Sbjct:    1 MRLPFQPPIEPMLAKLSGTFPEDDGWLFEPKWDGFRAIVFRDGDEVYTQSRDLKPLDRYFPELAEPLRAALPERCVVDGEVVIAGEGGLDFEALLLRIHPAASRVALLASETPASFVAWDLLAEGDEDLRDSPQAVRRSRLESVLDNRTPSVHLTPATRDRATAVDWFDRFEGAGLDGVIAKRLDAKYLPGKRAMLKLKHQRTADCVVAGFRWHKNGPG 219

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A534XX54_9DELT (DNA ligase (ATP) n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534XX54_9DELT)

HSP 1 Score: 276 bits (707), Expect = 1.120e-89
Identity = 136/215 (63.26%), Postives = 167/215 (77.67%), Query Frame = 0

Query:    5 LQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVA--PLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            ++PP+EPMLA L+ D P G+G++YEPKWDGFR LVF DG E+++QSR+ KPL RYFPEL++ L+RE+P   VLDGEIVI G DGL+FEALLLRIHPAASR+  LA +TPAS+VAFDLL+ +   L+D PFAERRE L +    A  P+ LTPATRD+  AR WF RFEGAGLDGV+AK+ +  Y P +R MVK+KH RTA+ VVGGFRW K   G
Sbjct:    2 IRPPVEPMLAKLAEDLPGGDGFLYEPKWDGFRCLVFRDGKEIFLQSRELKPLDRYFPELLEPLAREIPERCVLDGEIVIAGPDGLEFEALLLRIHPAASRVKLLASQTPASYVAFDLLSLDDQDLLDHPFAERREKLERALSKAKPPIRLTPATRDLAVARDWFSRFEGAGLDGVVAKRLESHYLPGKREMVKVKHARTADCVVGGFRWHKNGPG 216

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A534UDI5_9DELT (DNA ligase (ATP) n=4 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A534UDI5_9DELT)

HSP 1 Score: 275 bits (703), Expect = 4.120e-89
Identity = 139/217 (64.06%), Postives = 160/217 (73.73%), Query Frame = 0

Query:    5 LQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHL----IQIQPVAPLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            LQ PI PMLA LS   PEGEGWI+EPKWDGFRA+VF DGD+L +QSRD KPL RYFPEL   L R+LP   V+DGEIVI G DGLDF+ALLLRIHPAASR+  LA +TPAS+VAFDLLA     L + P  ERR  L      ++P  PL+LTPATRD   A+ WF RFEGAG DGV+AK+ D  Y+PD+R M+KIKHQRTA+ VV GFRW K   G
Sbjct:    2 LQGPIPPMLAKLSNSLPEGEGWIFEPKWDGFRAIVFRDGDDLLLQSRDLKPLNRYFPELEDPLRRQLPRRCVVDGEIVIAGPDGLDFDALLLRIHPAASRVKLLASQTPASYVAFDLLALGDEDLREAPQEERRRRLEDVLASVRP--PLYLTPATRDRAVAQDWFSRFEGAGFDGVVAKRADQPYQPDKRTMLKIKHQRTADCVVAGFRWHKNGPG 216

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A7V9U2T7_9BACT (DNA ligase (ATP) n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7V9U2T7_9BACT)

HSP 1 Score: 274 bits (700), Expect = 1.600e-88
Identity = 140/218 (64.22%), Postives = 160/218 (73.39%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVA--PLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQE 216
            MNL + PPI PMLA    + P GEGWI+EPKWDGFR LVF DGDE++IQSRD KPL RYFPELV  L  +LP   VLDGEIVI   DGLDF+AL LR+HPAASR+  LA +TPAS V FDLL E+  SL DTPFAERR  L  +  VA  PL LTPATRD  TA  WF RFEGAGLDGV+AK GD  Y+P++R+M+K+KH R  + VV GFRW K  E
Sbjct:    1 MNLAVNPPILPMLAKRVSELPPGEGWIFEPKWDGFRTLVFRDGDEIFIQSRDEKPLNRYFPELVAELEAQLPERCVLDGEIVIALNDGLDFDALQLRLHPAASRVKLLAGQTPASIVFFDLLCEDDRSLCDTPFAERRARLESLLAVAQSPLHLTPATRDRATAEDWFRRFEGAGLDGVVAKPGDGLYQPNKRVMLKVKHARECDCVVAGFRWHKRGE 218

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A534VX99_9DELT (ATP-dependent DNA ligase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534VX99_9DELT)

HSP 1 Score: 266 bits (681), Expect = 3.040e-87
Identity = 134/219 (61.19%), Postives = 162/219 (73.97%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQI--QPVAPLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M LP   P+EPMLA L+ + PEG GW+YEPKWDGFRAL F DG EL++QSR+ KPL RYFPEL   L RELP  +V+DGEIVI G+ GL+FEALLLRIHPAASR+  LA E+PAS++AFDLLA   + L + P AERRE L +   +  AP+ LTPA+ D   A+ WF RFEGAGLDGV+AK+ D  Y+P +R MVK+KH RTA+ VV GFRW K   G
Sbjct:    1 MALPFHSPVEPMLAKLAGELPEGHGWLYEPKWDGFRALAFRDGGELHLQSRELKPLNRYFPELEAPLLRELPERSVVDGEIVIAGKAGLEFEALLLRIHPAASRVKMLAQESPASYIAFDLLALGDDDLRERPLAERREMLERALGKARAPVHLTPASADRAVAQDWFSRFEGAGLDGVVAKQLDSTYQPGKRAMVKVKHARTADCVVAGFRWHKNGPG 219

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A2V7Y726_9BACT (DNA ligase (ATP) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7Y726_9BACT)

HSP 1 Score: 269 bits (688), Expect = 8.410e-87
Identity = 136/219 (62.10%), Postives = 160/219 (73.06%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVAP--LFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M  P+QPP+EPMLA L+ + PEGEGW++EPKWDGFRA+VF DG+E+YIQSRD +PL RYFPEL   L   LP  AV+DGEIVI  E GLDF+ L LR+HPAASR++KLA +TP+SFVAFDLLAE+G  L D P AERR  L +    A   + LTP TRD   A  WF RFEGAGLDGVIAK     Y+P +R MVK+KH RTA+ VV GFRW K   G
Sbjct:    1 MAFPIQPPVEPMLAKLTTELPEGEGWLFEPKWDGFRAVVFRDGEEVYIQSRDLRPLDRYFPELKAALCANLPPRAVVDGEIVIATEHGLDFDLLQLRLHPAASRVAKLAAQTPSSFVAFDLLAEDGRDLRDRPQAERRAALEKALARASGSIRLTPCTRDRRVAAEWFHRFEGAGLDGVIAKHETTTYQPGKRAMVKVKHTRTADCVVAGFRWHKNGPG 219

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A536NHJ2_9CHLR (DNA ligase (ATP) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536NHJ2_9CHLR)

HSP 1 Score: 268 bits (684), Expect = 4.600e-86
Identity = 135/219 (61.64%), Postives = 157/219 (71.69%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVA--PLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M LP QPPIEPMLA      P  +GW++EPKWDGFRA+VF DGD +Y QSRD KPL RYFPEL + L   LP   VLDGE+VI G  GLDFE+LLLRIHPA SR+  LA ETPASF+A+DLLA +   L   P  ERR  L  +  VA  P+ LTPATR+V TA  WFERFEGAGLDGV+AK+ +  Y+P +R M+KIKHQRTA+ VV GFRW K   G
Sbjct:    1 MKLPFQPPIEPMLAKAVDKLPADDGWLFEPKWDGFRAIVFRDGDTVYTQSRDLKPLDRYFPELAEPLRASLPERCVLDGEVVIAGTKGLDFESLLLRIHPADSRVRMLAGETPASFIAWDLLALDAEDLRGVPQGERRSRLEAVLGVARAPIHLTPATREVATAADWFERFEGAGLDGVVAKRIEAPYQPGKRAMLKIKHQRTADCVVAGFRWHKNGPG 219

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: A0A538AZI9_9ACTN (DNA ligase (ATP) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538AZI9_9ACTN)

HSP 1 Score: 266 bits (679), Expect = 1.870e-85
Identity = 130/215 (60.47%), Postives = 161/215 (74.88%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPV--APLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAK 213
            M LP++PPI+PMLA LSRD PEG+G +YEPKWDGFR + F DGD+L + SR+ KP+ RYFPELV  L   LP   V+DGEIV+  + GLDF+AL +RIHPAASR+ KLA E P+SFVAFDLLA + N L +TPFAERR+ L ++      P++LTP T D   A  WFE FEGAGLDGV+ K+ DL Y  D+R+M+K+KHQRTA+ VV GFRW K
Sbjct:    1 MRLPVKPPIKPMLAKLSRDLPEGDGLLYEPKWDGFRCIAFRDGDQLELGSRNEKPMNRYFPELVDSLKGNLPERCVVDGEIVVATDHGLDFDALQMRIHPAASRVKKLAGEIPSSFVAFDLLALDDNDLRETPFAERRKQLEKLGKKFKPPIYLTPLTDDAKVAGDWFEHFEGAGLDGVVVKRKDLNYCEDQRVMLKVKHQRTADCVVAGFRWHK 215

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BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Match: UPI0019BD6B75 (ATP-dependent DNA ligase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019BD6B75)

HSP 1 Score: 266 bits (679), Expect = 2.790e-85
Identity = 131/219 (59.82%), Postives = 159/219 (72.60%), Query Frame = 0

Query:    1 MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQSRDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHPAASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVA--PLFLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQRTANVVVGGFRWAKEQEG 217
            M+LP  PP+ PMLA LS   P G+GW++EPKWDGFRA+VF DGD++ IQSR+CKPL RYFP+L+  L+  LP   ++DGEIVI GE GLDF+AL LR+HPAASR++KLA   PA FV FDLLA     L +TP AERR+ L Q    A  P+ LTPAT D   A  WFE+FEGAGLDGV+AK     Y+PD R M+KIKH RTA+ VV GFRW K+ +G
Sbjct:    1 MSLPFDPPLSPMLAKLSAALPAGDGWLFEPKWDGFRAIVFKDGDQIAIQSRECKPLERYFPDLIAPLAAALPERCIVDGEIVIVGERGLDFDALQLRLHPAASRVAKLAEAQPAGFVVFDLLALGDEDLRETPQAERRQRLEQALAGAQPPIHLTPATHDRAIAEQWFEQFEGAGLDGVMAKPQGAAYQPDVRAMLKIKHARTADCVVAGFRWHKQGKG 219

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig11683.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6I1QWB8_9CHLR	1.010e-98	65.30	DNA ligase (ATP) n=1 Tax=Dehalococcoidia bacterium...	[more]
A0A535PH25_9CHLR	6.060e-91	64.84	DNA ligase (ATP) n=1 Tax=Chloroflexi bacterium Tax...	[more]
A0A534XX54_9DELT	1.120e-89	63.26	DNA ligase (ATP) n=2 Tax=Deltaproteobacteria bacte...	[more]
A0A534UDI5_9DELT	4.120e-89	64.06	DNA ligase (ATP) n=4 Tax=unclassified Deltaproteob...	[more]
A0A7V9U2T7_9BACT	1.600e-88	64.22	DNA ligase (ATP) n=1 Tax=Gemmatimonadaceae bacteri...	[more]
A0A534VX99_9DELT	3.040e-87	61.19	ATP-dependent DNA ligase (Fragment) n=1 Tax=Deltap...	[more]
A0A2V7Y726_9BACT	8.410e-87	62.10	DNA ligase (ATP) n=1 Tax=Acidobacteria bacterium T...	[more]
A0A536NHJ2_9CHLR	4.600e-86	61.64	DNA ligase (ATP) n=1 Tax=Chloroflexi bacterium Tax...	[more]
A0A538AZI9_9ACTN	1.870e-85	60.47	DNA ligase (ATP) n=1 Tax=Actinomycetia bacterium T...	[more]
UPI0019BD6B75	2.790e-85	59.82	ATP-dependent DNA ligase n=1 Tax=Deltaproteobacter...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.470.30	DNA ligase/mRNA capping enzyme	coord: 8..197 e-value: 4.4E-35 score: 123.1
None	No IPR available	PANTHER	PTHR45674	DNA LIGASE 1/3 FAMILY MEMBER	coord: 1..212
None	No IPR available	PANTHER	PTHR45674:SF10	DNA LIGASE C	coord: 1..212
None	No IPR available	SUPERFAMILY	56091	DNA ligase/mRNA capping enzyme, catalytic domain	coord: 7..197
IPR012310	DNA ligase, ATP-dependent, central	PFAM	PF01068	DNA_ligase_A_M	coord: 23..197 e-value: 4.4E-31 score: 108.1
IPR016059	DNA ligase, ATP-dependent, conserved site	PROSITE	PS00697	DNA_LIGASE_A1	coord: 29..37
IPR044119	LigC-like, adenylation domain	CDD	cd07905	Adenylation_DNA_ligase_LigC	coord: 9..200 e-value: 5.26902E-93 score: 268.731

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig11683	contig	P-wetherbeei_contig11683:1461..2111 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig11683.1.1	mRNA_P-wetherbeei_contig11683.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig11683 1461..2111 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig11683.1.1 ID=prot_P-wetherbeei_contig11683.1.1|Name=mRNA_P-wetherbeei_contig11683.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=217bp
MNLPLQPPIEPMLALLSRDFPEGEGWIYEPKWDGFRALVFWDGDELYIQS
RDCKPLARYFPELVQGLSRELPVGAVLDGEIVIQGEDGLDFEALLLRIHP
AASRISKLALETPASFVAFDLLAENGNSLMDTPFAERREHLIQIQPVAPL
FLTPATRDVGTARTWFERFEGAGLDGVIAKKGDLGYRPDERLMVKIKHQR
TANVVVGGFRWAKEQEG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012310	DNA_ligase_ATP-dep_cent
IPR016059	DNA_ligase_ATP-dep_CS
IPR044119	Adenylation_LigC-like