mRNA_P-wetherbeei_contig11651.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11651.1.1
Unique NamemRNA_P-wetherbeei_contig11651.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A7C2M0L6_9HYPH (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M0L6_9HYPH)

HSP 1 Score: 287 bits (735), Expect = 1.900e-95
Identity = 152/229 (66.38%), Postives = 182/229 (79.48%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            K ALI GAGSGISAAFA  L   GYR+ALAAR+ D+L +L+ ++ A    ADAAD  +VAA F ++D+ FG LDVVLYNA+ RVRGP+ +LDPA V +++ VTA+GGFLV Q AARRMLA+G G I FTGASASVKGY +SA FAMGKFALRGLAQ+MAREL  KG+H+AHFVIDGGVRN +RGR +   APDSLLDP AIA +Y+ V+ Q RSAWS E+E+RPW ERF
Sbjct:    3 KAALIVGAGSGISAAFARALARDGYRVALAARDVDKLGSLSREIGATAHAADAADPGAVAALFAEVDRAFGRLDVVLYNASYRVRGPLLDLDPAEVRRSLEVTAYGGFLVGQAAARRMLAQGAGAIFFTGASASVKGYAQSAPFAMGKFALRGLAQAMARELQGKGIHIAHFVIDGGVRNPQRGRPDDPAAPDSLLDPDAIARTYMAVLAQTRSAWSLEVELRPWVERF 231          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A7C4TR75_9HYPH (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TR75_9HYPH)

HSP 1 Score: 285 bits (730), Expect = 1.130e-94
Identity = 149/230 (64.78%), Postives = 183/230 (79.57%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAG-APDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            + ALIFG GSGISA+FA  L   GY++A+A+R+ ++L ALAA+  A   +AD +  + VA+ FG LD+ F  LDVVLYNA QR+RG IAEL P+ V  A++VTAFGGFLV Q+AARRML +G G I+FTGASASVKGYP+SA FAMGKFALRGLAQSMAREL PKG+HVAHFVIDG VR+ E GRVE     PDS+LDP AIA++Y+ ++ QPRSAW+WE+E+RPW ERF
Sbjct:    3 RNALIFGVGSGISASFARVLAREGYKLAVASRHKEKLDALAAETGALAFSADVSRIDHVASVFGALDREFDRLDVVLYNAGQRMRGAIAELAPSKVAHALNVTAFGGFLVGQEAARRMLKQGSGAILFTGASASVKGYPQSAAFAMGKFALRGLAQSMARELAPKGIHVAHFVIDGQVRSEESGRVEGRDDPPDSMLDPDAIAETYLQIVRQPRSAWTWEVELRPWVERF 232          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A1F4B701_9PROT (Oxidoreductase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4B701_9PROT)

HSP 1 Score: 285 bits (729), Expect = 1.780e-94
Identity = 155/233 (66.52%), Postives = 185/233 (79.40%), Query Frame = 1
Query:    1 VMKTALIFGAGSGISAAFAHRLHERG-YRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHL-DVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            + KTALI GAG G+SA+ A    ++G  RIALAARN  +L ALA  +DA  L  DA+D + V + F + D+ FG   DVV+YN + RVRGPI ++DP  V +A+ VTAFGGFLVAQQAARRM+++G G I+FTGASASVKGYP+SA+FAMGKFALRGLAQSMAREL PKGVH+AHFVIDGG+RN   GRVE A APDS+LDP AIA SY+HV+EQ RSAWSWEIEVRPW E+F
Sbjct:    5 IHKTALIVGAGDGLSASVARLFADKGGMRIALAARNPGKLAALANQLDACALECDASDRSRVESMFAKADEWFGASPDVVVYNPSYRVRGPILDIDPGDVAKALAVTAFGGFLVAQQAARRMVSRGSGAILFTGASASVKGYPQSASFAMGKFALRGLAQSMARELAPKGVHIAHFVIDGGIRN--PGRVEPANAPDSMLDPDAIARSYLHVLEQDRSAWSWEIEVRPWVEKF 235          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A5FYF3_ACICJ (Short-chain dehydrogenase/reductase SDR n=9 Tax=Acetobacteraceae TaxID=433 RepID=A5FYF3_ACICJ)

HSP 1 Score: 278 bits (711), Expect = 9.990e-92
Identity = 150/229 (65.50%), Postives = 176/229 (76.86%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            + ALI GAGSG+SAA A R   +G  +ALAARN D+L  L AD+ A     DAAD+ +VA  F Q++   G  DVV+YNA+ RVRGP+A LDP AV +A+ V+AFGGFLV Q AARRML  G G I+FTGASASVKGY ESA FAMGKFALRGLAQSMAREL PKG+HVAHFVIDGG+R+  R     A APDSLLDP AIA++Y+HV+ QPRSAW+WEIE+RPW ERF
Sbjct:   10 RRALIVGAGSGLSAALARRFAAQGMSVALAARNPDKLAPLCADIGAKSFACDAADAAAVAGLFEQVEAGGGTPDVVVYNASGRVRGPVASLDPEAVARALAVSAFGGFLVGQHAARRMLDAGNGAILFTGASASVKGYAESAAFAMGKFALRGLAQSMARELAPKGIHVAHFVIDGGIRSASR--PVPADAPDSLLDPEAIAETYLHVLHQPRSAWTWEIELRPWVERF 236          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A545TF38_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TF38_9PROT)

HSP 1 Score: 275 bits (703), Expect = 1.390e-90
Identity = 137/231 (59.31%), Postives = 179/231 (77.49%), Query Frame = 1
Query:    4 MKTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERG-RVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            M TA+I GAG G+SAA A +LH RG+++ LAARN  +L  L A+  A ++T DA+++  +   F + D   G LDV +YN + RVRG I +LDPAAV  A+ +T +G FL+AQQAA+RM+ +G+G I+FTGASA VKGYP S+TFAMGKFALRGLAQS+ARELHP+G+H+ HFVIDGG+RN  R  RVE A  PDS+LDP AIA+SY+H ++QPRS+W+WEIE+RPW E+F
Sbjct:    1 MGTAVIIGAGEGLSAALARKLHARGHKLLLAARNTGKLAELQAETGATMVTCDASEAADMEKVFAEADALEGPLDVAIYNPSARVRGGITDLDPAAVKSAVLITGYGAFLMAQQAAKRMIPQGKGAILFTGASAGVKGYPNSSTFAMGKFALRGLAQSLARELHPQGIHIGHFVIDGGIRNASRPERVETAENPDSMLDPDAIAESYLHFLDQPRSSWAWEIELRPWVEKF 231          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A1H4KSB1_9HYPH (NADP-dependent 3-hydroxy acid dehydrogenase YdfG n=1 Tax=Beijerinckia sp. 28-YEA-48 TaxID=1882748 RepID=A0A1H4KSB1_9HYPH)

HSP 1 Score: 275 bits (703), Expect = 1.390e-90
Identity = 147/229 (64.19%), Postives = 177/229 (77.29%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            K+ALI GAGSG+SA+ A  L   G+ + LAARN  +L AL+A+  A   + DA D  +VA  F ++D T G  DVV+YNA+ R RG IAEL P  V QAI V+AFGGFLVAQQAARRMLAKGQG+I+FTGASASVKG+P+SA FAMGKFALRGLAQSMAREL PKG+HVAHFVIDGG+     GR   + APD+LLDP AIA SY+ ++ QPR+AW+WEIE+RPW E+F
Sbjct:    5 KSALIVGAGSGLSASLARLLAREGWAVGLAARNAYKLSALSAEAGARAWSCDATDPAAVAKLFDEVDATLGPPDVVVYNASARARGTIAELVPEEVRQAIEVSAFGGFLVAQQAARRMLAKGQGSILFTGASASVKGFPQSAAFAMGKFALRGLAQSMARELAPKGIHVAHFVIDGGIARD--GRTPPSEAPDALLDPDAIAQSYLQIIRQPRNAWTWEIELRPWVEKF 231          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A2D7FB84_9HYPH (Oxidoreductase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FB84_9HYPH)

HSP 1 Score: 275 bits (702), Expect = 2.040e-90
Identity = 143/230 (62.17%), Postives = 177/230 (76.96%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAP-DSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            KTALI G GSGISA+FA  L   GY++AL ARN D+L ALA++  AA ++ DA     V A F +LD +FG + VVLYN +QRV G I +L PA V QAI+++AFGGFLVAQ+AA+RM+ +G G I+FTGASASVKGY  S  FAMGKFALRGLAQS+AREL P+ +HVAHFVIDGGVRN E+GR E+A  P D  LDP AIA++Y+ ++ QPRSAW+WE+E+RPW E F
Sbjct:    3 KTALIVGTGSGISASFARLLAREGYKLALTARNTDKLSALASETGAATISCDATKIEEVNAVFDELDCSFGEIGVVLYNPSQRVPGTIVDLPPADVAQAINISAFGGFLVAQEAAKRMIKQGHGNILFTGASASVKGYARSTAFAMGKFALRGLAQSLARELAPQNIHVAHFVIDGGVRNPEKGRQESASDPVDKYLDPDAIAETYLSIVNQPRSAWTWEVELRPWVENF 232          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A1L3STT3_9HYPH (Oxidoreductase n=1 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3STT3_9HYPH)

HSP 1 Score: 274 bits (700), Expect = 3.580e-90
Identity = 140/230 (60.87%), Postives = 176/230 (76.52%), Query Frame = 1
Query:    4 MKTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            M TALI G G G+SA+ A +L  RG ++ LAAR  D+L+ALAA+ +   ++ DAA+   V A FG+ D+  G L+VV+YN + RVRGP  ++DP  V +A+ VTAFG FLVAQQ ARRML +G+GTI+FTGASA VKGYP+SA+FAMGKFALRGLAQSMARELHPKG+HV H VIDG +RN   GR E A  P S+LDP AIA++Y+ +++Q RSAWSWE+EVRPW E F
Sbjct:    1 MSTALIVGVGDGLSASLARKLAARGMKLVLAARKVDKLEALAAETNGVTVSCDAANGEDVEALFGRTDEMGGDLEVVIYNPSSRVRGPFVDVDPGEVQKALQVTAFGAFLVAQQGARRMLPRGKGTILFTGASAGVKGYPQSASFAMGKFALRGLAQSMARELHPKGIHVGHVVIDGAIRN--PGRTEPADKPHSMLDPDAIAETYMQLIDQDRSAWSWEVEVRPWVETF 228          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A537R929_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R929_9PROT)

HSP 1 Score: 273 bits (699), Expect = 5.820e-90
Identity = 149/230 (64.78%), Postives = 172/230 (74.78%), Query Frame = 1
Query:    7 KTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAG-APDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            KTALI GAGSGISA+FA  L + GYRI LA+RN   L +LA +  A     DAAD  SV   F  +DQ F  LDV L+NA+ R  GPI E+D      A+ ++++GGFLVAQ AA RML  G GTI+ TGASASVKGYP+SA FAMGKFALRGLAQSMAREL PKG+HVAHFVIDGGVRN E+GRVE A  A DS LDP AIA SY+HV+ QPRSAW+WE+E+RPW ERF
Sbjct:    3 KTALIVGAGSGISASFARLLAKDGYRIVLASRNPATLTSLATETKATTHPCDAADPASVDQLFAHVDQQFPKLDVCLFNASARAPGPITEVDREQARTALLISSYGGFLVAQAAAGRMLLHGSGTILLTGASASVKGYPQSAVFAMGKFALRGLAQSMARELAPKGIHVAHFVIDGGVRNAEKGRVEGANRAADSYLDPDAIAQSYLHVVRQPRSAWTWEVELRPWVERF 232          
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Match: A0A2G1QQ75_9HYPH (Oxidoreductase n=1 Tax=Zhengella mangrovi TaxID=1982044 RepID=A0A2G1QQ75_9HYPH)

HSP 1 Score: 272 bits (696), Expect = 1.450e-89
Identity = 143/230 (62.17%), Postives = 175/230 (76.09%), Query Frame = 1
Query:    4 MKTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVLTADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQAIHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKFALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPGAIADSYIHVMEQPRSAWSWEIEVRPWTERF 693
            M  ALI GAGSG+SA+ A +L  +GYR+ LAAR+  +L  LAA+ DA  L AD ADS +V+  F  +D+    + V +YN + RVRGP+AE+DP  V +A+ VTAFG FL A+QAARRMLA+G GTI+FTGASA VKGYP+SA FAMGKFALRGLAQSMARELHPKG+HV H VIDG +RN   GR E A  PDS+LDP A+A++Y+ ++ Q RS WSWEIEVRPW ERF
Sbjct:    1 MPIALIAGAGSGLSASLARKLSSQGYRVVLAARDTGKLAGLAAETDAVTLRADMADSQAVSDLFEGVDRLSEPITVAIYNPSYRVRGPVAEVDPDEVQKALQVTAFGAFLFARQAARRMLAEGTGTILFTGASAGVKGYPQSAAFAMGKFALRGLAQSMARELHPKGIHVGHVVIDGMIRN--PGRTEPADQPDSMLDPDAVAETYLQLLHQDRSVWSWEIEVRPWVERF 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2M0L6_9HYPH1.900e-9566.38SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A7C4TR75_9HYPH1.130e-9464.78SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A1F4B701_9PROT1.780e-9466.52Oxidoreductase n=2 Tax=unclassified Betaproteobact... [more]
A5FYF3_ACICJ9.990e-9265.50Short-chain dehydrogenase/reductase SDR n=9 Tax=Ac... [more]
A0A545TF38_9PROT1.390e-9059.31SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A1H4KSB1_9HYPH1.390e-9064.19NADP-dependent 3-hydroxy acid dehydrogenase YdfG n... [more]
A0A2D7FB84_9HYPH2.040e-9062.17Oxidoreductase n=2 Tax=Hyphomicrobiaceae TaxID=454... [more]
A0A1L3STT3_9HYPH3.580e-9060.87Oxidoreductase n=1 Tax=Aquibium oceanicum TaxID=16... [more]
A0A537R929_9PROT5.820e-9064.78SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A2G1QQ75_9HYPH1.450e-8962.17Oxidoreductase n=1 Tax=Zhengella mangrovi TaxID=19... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11651contigP-wetherbeei_contig11651:234..929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog349163.Acry_1425
PFAMsadh_short
Model size696
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.58e-92
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MWJQ@1224|Proteobacteria,2TSQ1@28211|Alphaproteobacteria,2JRQ3@204441|Rhodospirillales
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size693
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.6531143-CDS-P-wetherbeei_contig11651:233..9261683185920.6531143-CDS-P-wetherbeei_contig11651:233..926Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11651 234..926 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.6642191-UTR-P-wetherbeei_contig11651:926..9291683185920.6642191-UTR-P-wetherbeei_contig11651:926..929Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11651 927..929 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11651.1.1prot_P-wetherbeei_contig11651.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11651 234..926 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11651.1.1

>prot_P-wetherbeei_contig11651.1.1 ID=prot_P-wetherbeei_contig11651.1.1|Name=mRNA_P-wetherbeei_contig11651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp
MKTALIFGAGSGISAAFAHRLHERGYRIALAARNGDRLKALAADVDAAVL
TADAADSNSVAAAFGQLDQTFGHLDVVLYNAAQRVRGPIAELDPAAVLQA
IHVTAFGGFLVAQQAARRMLAKGQGTIMFTGASASVKGYPESATFAMGKF
ALRGLAQSMARELHPKGVHVAHFVIDGGVRNGERGRVEAAGAPDSLLDPG
AIADSYIHVMEQPRSAWSWEIEVRPWTERF*
back to top

mRNA from alignment at P-wetherbeei_contig11651:234..929-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11651.1.1 ID=mRNA_P-wetherbeei_contig11651.1.1|Name=mRNA_P-wetherbeei_contig11651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig11651:234..929- (Phaeothamnion wetherbeei SAG_119_79)
GTCATGAAGACAGCACTTATATTCGGCGCAGGGTCGGGCATCAGCGCAGC GTTCGCTCACCGGCTGCACGAACGCGGCTATCGCATCGCGCTGGCGGCCC GCAATGGAGACCGGCTGAAAGCGCTCGCCGCCGACGTCGATGCGGCGGTA CTCACTGCGGATGCTGCCGACAGCAACTCCGTTGCCGCGGCGTTCGGCCA ACTCGATCAGACGTTCGGACACCTCGACGTGGTGCTCTACAATGCCGCGC AGCGCGTCCGCGGACCCATCGCGGAACTCGATCCGGCAGCCGTTCTGCAG GCGATCCACGTTACGGCCTTCGGCGGATTCCTGGTCGCCCAGCAGGCGGC GCGGCGCATGCTCGCGAAAGGCCAAGGTACGATCATGTTCACCGGCGCTT CGGCGAGCGTGAAGGGCTATCCGGAGAGTGCGACGTTCGCGATGGGCAAA TTCGCGTTGCGGGGGCTCGCGCAATCGATGGCCAGGGAACTGCACCCCAA GGGCGTCCACGTCGCACATTTCGTGATCGACGGCGGGGTGCGCAACGGCG AACGTGGCCGCGTCGAGGCGGCAGGCGCTCCCGACAGCCTGCTCGATCCC GGCGCCATCGCGGACAGCTACATCCACGTCATGGAGCAGCCGCGCTCGGC ATGGTCCTGGGAGATCGAGGTTCGCCCCTGGACCGAGCGCTTCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11651:234..929-

>mRNA_P-wetherbeei_contig11651.1.1 ID=mRNA_P-wetherbeei_contig11651.1.1|Name=mRNA_P-wetherbeei_contig11651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig11651:234..929- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGACAGCACTTATATTCGGCGCAGGGTCGGGCATCAGCGCAGCGTT
CGCTCACCGGCTGCACGAACGCGGCTATCGCATCGCGCTGGCGGCCCGCA
ATGGAGACCGGCTGAAAGCGCTCGCCGCCGACGTCGATGCGGCGGTACTC
ACTGCGGATGCTGCCGACAGCAACTCCGTTGCCGCGGCGTTCGGCCAACT
CGATCAGACGTTCGGACACCTCGACGTGGTGCTCTACAATGCCGCGCAGC
GCGTCCGCGGACCCATCGCGGAACTCGATCCGGCAGCCGTTCTGCAGGCG
ATCCACGTTACGGCCTTCGGCGGATTCCTGGTCGCCCAGCAGGCGGCGCG
GCGCATGCTCGCGAAAGGCCAAGGTACGATCATGTTCACCGGCGCTTCGG
CGAGCGTGAAGGGCTATCCGGAGAGTGCGACGTTCGCGATGGGCAAATTC
GCGTTGCGGGGGCTCGCGCAATCGATGGCCAGGGAACTGCACCCCAAGGG
CGTCCACGTCGCACATTTCGTGATCGACGGCGGGGTGCGCAACGGCGAAC
GTGGCCGCGTCGAGGCGGCAGGCGCTCCCGACAGCCTGCTCGATCCCGGC
GCCATCGCGGACAGCTACATCCACGTCATGGAGCAGCCGCGCTCGGCATG
GTCCTGGGAGATCGAGGTTCGCCCCTGGACCGAGCGCTTCTGA
back to top