prot_P-wetherbeei_contig1165.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1165.1.1
Unique Nameprot_P-wetherbeei_contig1165.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length412
Homology
BLAST of mRNA_P-wetherbeei_contig1165.1.1 vs. uniprot
Match: A0A835YV38_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV38_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.280e-14
Identity = 102/408 (25.00%), Postives = 157/408 (38.48%), Query Frame = 0
Query:    8 DALRWSDVNWLLVLESSLEAPFYFIRSGLIRSDLLSRY--SGPHMPPTFLVRTFAALRRILLRPRME--GILWTLKPASKRRAGSFTFD-----THELLIRPNFPRQPHPMSSMANSNGGNGGVERPGNTSSDVFATMRDGLPMILQAQLQVLPFYPERALSA-GADFPAAAAAAVESLERSKTSPCSSFRVRALVLAAGRLKVYCYKDFRVLISAGAAMPSLQSPGEGPVGLSTSSLPSLSPGEAPRQWEGAQGSFKSCTAAGTESHTPRSGAPAALPEDFTCNLDLRQCRQLG---CGWGRISIDGAAARASIIDQIHEITTHVFVSLLAAATSQHFFATATCYELFALDFAVD-REAKVWLLEAHANPAVTDFGRRYGELFRGSPLRTPPTPDEWRLLLESQAGG 401
            D  +W  V W  V   +  APF F+RSGLIR DLL +     P +P T+ + +   L+ +L   +++    +W LKPA    A    F      T ELL                                +D+     DG P +LQ  + + P  P  A +  G    +    AV + + +  +    + +R LVLA GRLKVY  +   VL+   A  P  Q P                                S   A   +H       AA P  +   L    C  LG   CG   + +    A+A+   +I        +   A    + F   A CYEL+  DF +D    ++ LLEA+ +P++  F + Y ++   SPL+    P+++ L+ +  A G
Sbjct:    3 DRPQWKSVKWNAVFNGACTAPFLFMRSGLIRKDLLHQILAGDPCVPRTYTLHSAGELQALLSTAQLQQHSHVWVLKPARSSNANGIRFIDVRAITDELL--------------------------------ADLAKGWSDGAPKLLQEYI-IPPLLPGPAPAEHGPPGESLRGDAVATGDGAAAAGGHKWHLRVLVLAVGRLKVYVRRGMAVLV---APEPLPQPP--------------------------------SSDLASAHAHVTNRAHNAAHPR-YRAAL---HCLALGGSRCGAALLPVASIRAQAA---RICGYAFAALMRAPAPGQRRQFLPLANCYELYGFDFMLDGASGQLKLLEANPDPSLAMFSQTYADVLPASPLQQ--VPEDFDLVYDFDADG 333          
BLAST of mRNA_P-wetherbeei_contig1165.1.1 vs. uniprot
Match: A0A024UK71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK71_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.590e-8
Identity = 58/216 (26.85%), Postives = 84/216 (38.89%), Query Frame = 0
Query:   11 RWSDVNWLLVLESSLEAPFYFIRSGLIRSDLLSRYSGPHMPPTFLVRTFAALRRILLRPRME-------GILWTLKPASKRRAGSFTFDTHELLIRPNFPRQPHPMSSMANSNGGNGGVERPGNTSSDVFATMRDGLPMILQAQLQVLPFYPERALSAGADFPAAAAAAVESLERSKTSPCSSFRVRALVLAAGRLKVYCYKDFRVLISAGAAMPS 219
            +W D+ W  VLE S  A  YF+RSGLIR DLL  Y+  +MP TF+V++  ++  I+  P ME         +W LK +    A    F          F R+                       +S +   ++DG   ++Q  +Q   F   +                             F VR LVLA G L VY Y   RVL+++    P+
Sbjct:    9 KWRDIPWADVLEKSAHADKYFMRSGLIRKDLLPLYAAEYMPKTFVVKSMDSINEII--PLMEEEDKHASNDVWVLKLSDSSNAYGIHF----------FHRK----------------------DASSLAYIVQDGQTRVVQKNVQSALFNGRK-----------------------------FHVRVLVLAVGHLDVYVYDRSRVLVASAPYSPT 161          
BLAST of mRNA_P-wetherbeei_contig1165.1.1 vs. uniprot
Match: W4G987_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G987_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.280e-7
Identity = 58/208 (27.88%), Postives = 81/208 (38.94%), Query Frame = 0
Query:   11 RWSDVNWLLVLESSLEAPFYFIRSGLIRSDLLSRYSGPHMPPTFLVRTFAALRRILLRPRME-----GILWTLKPASKRRAGSFTFDTHELLIRPNFPRQPHPMSSMANSNGGNGGVERPGNTSSDVFATMRDGLPMILQAQLQVLPFYPERALSAGADFPAAAAAAVESLERSKTSPCSSFRVRALVLAAGRLKVYCYKDFRVLISA 213
            +W D+ W  VLE ++ A  YF+RSGLIR DLL  Y+  HMP TF+V +   + +I+     E       LW LK +    A    F          F R    ++SMA                           P++   Q +V+  Y +  L  G                        F +R LVLA G L VY Y   RVL+++
Sbjct:    9 KWRDIPWQEVLEKNVHADKYFMRSGLIRKDLLPLYAAEHMPRTFVVSSMEDVNQIIHFMEEEDKCSANDLWVLKLSDSSNAFGIHF----------FHRTD--VASMA---------------------------PILGDGQTRVVQKYVQSTLLDG----------------------KKFHLRVLVLAVGHLDVYVYDRCRVLVAS 155          
BLAST of mRNA_P-wetherbeei_contig1165.1.1 vs. uniprot
Match: A0A6G0X5B5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5B5_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.440e-6
Identity = 52/209 (24.88%), Postives = 82/209 (39.23%), Query Frame = 0
Query:   11 RWSDVNWLLVLESSLEAPFYFIRSGLIRSDLLSRYSGPHMPPTFLVRTFAALRRILLRPRMEGI------LWTLKPASKRRAGSFTFDTHELLIRPNFPRQPHPMSSMANSNGGNGGVERPGNTSSDVFATMRDGLPMILQAQLQVLPFYPERALSAGADFPAAAAAAVESLERSKTSPCSSFRVRALVLAAGRLKVYCYKDFRVLISA 213
            +W ++ W  VL+    A  YF+RSGLIR DLL  YS   MPPT +V +      +L + + + I      LW LK +    A    +  H   ++                             ++ V + + DG   +LQ  +Q +    ++                             F +RALVLA G L VY Y++ RVL+++
Sbjct:    9 KWREIPWNDVLKQKCSADKYFMRSGLIRKDLLPVYSSEFMPPTHVVSSVEEFDAVLDKIKEDIIAVRADDLWVLKLSDSSNA----YGIHFFHLK----------------------------ETTSVRSLLLDGQTRVLQKYVQPMLIDGKK-----------------------------FHIRALVLAVGHLDVYVYENVRVLLAS 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1165.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YV38_9STRA2.280e-1425.00Tubulin-tyrosine ligase family-domain-containing p... [more]
A0A024UK71_9STRA1.590e-826.85Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4G987_9STRA2.280e-727.88Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6G0X5B5_9STRA6.440e-624.88Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 306..368
e-value: 2.6E-8
score: 33.4
NoneNo IPR availableGENE3D3.30.470.20coord: 184..379
e-value: 1.3E-12
score: 49.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1165contigP-wetherbeei_contig1165:4452..5998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1165.1.1mRNA_P-wetherbeei_contig1165.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1165 4431..6022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1165.1.1 ID=prot_P-wetherbeei_contig1165.1.1|Name=mRNA_P-wetherbeei_contig1165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=412bp
MDAAGECDALRWSDVNWLLVLESSLEAPFYFIRSGLIRSDLLSRYSGPHM
PPTFLVRTFAALRRILLRPRMEGILWTLKPASKRRAGSFTFDTHELLIRP
NFPRQPHPMSSMANSNGGNGGVERPGNTSSDVFATMRDGLPMILQAQLQV
LPFYPERALSAGADFPAAAAAAVESLERSKTSPCSSFRVRALVLAAGRLK
VYCYKDFRVLISAGAAMPSLQSPGEGPVGLSTSSLPSLSPGEAPRQWEGA
QGSFKSCTAAGTESHTPRSGAPAALPEDFTCNLDLRQCRQLGCGWGRISI
DGAAARASIIDQIHEITTHVFVSLLAAATSQHFFATATCYELFALDFAVD
REAKVWLLEAHANPAVTDFGRRYGELFRGSPLRTPPTPDEWRLLLESQAG
GAAAARRGPSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam