mRNA_P-wetherbeei_contig11649.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11649.1.1
Unique NamemRNA_P-wetherbeei_contig11649.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: A0A0D2WVR6_CAPO3 (Fido domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WVR6_CAPO3)

HSP 1 Score: 69.3 bits (168), Expect = 5.010e-12
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:  127 QLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGHSRAAKH 285
            +LAA L+    T+HPF++GNG L RLL SY F  C  P PV++T+GHSRA KH
Sbjct:  181 RLAAWLFVQVITLHPFENGNGRLCRLLASYVFQKCGVPFPVVITSGHSRAYKH 233
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: A0A836B787_9CHLO (Fido domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B787_9CHLO)

HSP 1 Score: 67.0 bits (162), Expect = 9.250e-12
Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 1 
Query:   13 VSAGCYWTTKVYAGT-----HYRLLEGGGHAAFND--------ARGSIHLLQLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGHSRAAKH 285
            VSAG Y T   ++GT         ++GG  A   +        A G++    +AA L+++   +HPFQ+GNG L RLLV+YA M    P PV L+NGH ++ +H
Sbjct:   25 VSAGEYRTLPAHSGTGTVYPEAEYIDGGMVAVLENFHRDLALVASGALDKHIMAARLFYEMIMLHPFQNGNGRLCRLLVTYALMKAGDPFPVCLSNGHKKSRQH 128
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: A0A150GV29_GONPE (Fido domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GV29_GONPE)

HSP 1 Score: 56.6 bits (135), Expect = 1.960e-7
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 1 
Query:  130 LAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGH 267
            LAA L++D  T HPF++GNG L RLL ++A M    P P  LT+GH
Sbjct:  150 LAAQLFYDMVTAHPFENGNGRLCRLLAAFALMAAGDPFPTPLTDGH 195
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: A0A1X7V9F6_AMPQE (Fido domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V9F6_AMPQE)

HSP 1 Score: 55.5 bits (132), Expect = 6.500e-7
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 1 
Query:  130 LAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGHSRAAKH 285
            LA  +Y+   ++HPF+DGNG + RLL  Y+ M    P P +LT+GH ++ KH
Sbjct:  202 LATWVYYHVVSLHPFEDGNGRMSRLLWCYSLMKDGLPFPPLLTSGHKKSQKH 253
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: UPI0019C555A6 (Fic family protein n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019C555A6)

HSP 1 Score: 52.4 bits (124), Expect = 9.140e-6
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 1 
Query:   85 HAAFNDARGSIHLLQLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILT 258
            H + +D   SIHLL LAA  +++   IHPF DGNG + R+L++ A M  D P  +I T
Sbjct:  170 HKSLSDE--SIHLLLLAATFHYEFIRIHPFDDGNGRIARILMNLALMMKDFPPAIIKT 225
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: UPI0018EB5920 (Fic family protein n=1 Tax=Chitinophaga sp. ASV3 TaxID=2795108 RepID=UPI0018EB5920)

HSP 1 Score: 50.8 bits (120), Expect = 3.180e-5
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:  109 GSIHLLQLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVI 252
            G +H LQLAA L++    IHPF DGNG L RLL++YA +  + P  VI
Sbjct:  175 GELHPLQLAALLHYRFVRIHPFDDGNGRLSRLLMNYALLRNNYPPVVI 222
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: UPI00141FF1D8 (Fic family protein n=1 Tax=Chitinophaga sp. Cy-1792 TaxID=2608339 RepID=UPI00141FF1D8)

HSP 1 Score: 50.4 bits (119), Expect = 4.350e-5
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 1 
Query:  109 GSIHLLQLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVI 252
            G +H LQLAA L++    IHPF DGNG L RLL++Y  +  + P  +I
Sbjct:  175 GELHPLQLAALLHYRFVRIHPFDDGNGRLSRLLMNYVLLRANYPPAII 222
[Close]
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Match: A0A327WA82_9BACT (Fic family protein n=1 Tax=Chitinophaga dinghuensis TaxID=1539050 RepID=A0A327WA82_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 8.100e-5
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1 
Query:  109 GSIHLLQLAADLYFDTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGHSR 273
            G +H +QLAA L++    IHPF DGNG L RLL++Y+ +  + P PVI+ +   R
Sbjct:  175 GELHPIQLAALLHYRFVRIHPFDDGNGRLSRLLMNYSLLRNNYP-PVIIKSEDKR 228
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11649.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A0D2WVR6_CAPO35.010e-1256.60Fido domain-containing protein n=1 Tax=Capsaspora ... [more]
A0A836B787_9CHLO9.250e-1237.50Fido domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A150GV29_GONPE1.960e-752.17Fido domain-containing protein n=1 Tax=Gonium pect... [more]
A0A1X7V9F6_AMPQE6.500e-744.23Fido domain-containing protein n=1 Tax=Amphimedon ... [more]
UPI0019C555A69.140e-644.83Fic family protein n=1 Tax=Rhizobacter sp. TaxID=1... [more]
UPI0018EB59203.180e-552.08Fic family protein n=1 Tax=Chitinophaga sp. ASV3 T... [more]
UPI00141FF1D84.350e-547.92Fic family protein n=1 Tax=Chitinophaga sp. Cy-179... [more]
A0A327WA82_9BACT8.100e-545.45Fic family protein n=1 Tax=Chitinophaga dinghuensi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11649contigP-wetherbeei_contig11649:857..1141 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog192875.XP_004344334.1
Preferred nameFICD
PFAMsFic
Model size285
Max annot lvl2759|Eukaryota
KEGG koko:K17277
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006950,GO:0006952,GO:0007600,GO:0007601,GO:0007610,GO:0007632,GO:0008081,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009966,GO:0009987,GO:0010646,GO:0012505,GO:0015696,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0017076,GO:0018117,GO:0018175,GO:0019538,GO:0023051,GO:0030176,GO:0030544,GO:0030554,GO:0031072,GO:0031224,GO:0031227,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034260,GO:0034976,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042578,GO:0042742,GO:0042802,GO:0042803,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044601,GO:0044602,GO:0044603,GO:0045117,GO:0046983,GO:0048519,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050829,GO:0050877,GO:0050896,GO:0050906,GO:0050908,GO:0050953,GO:0050962,GO:0051087,GO:0051179,GO:0051234,GO:0051336,GO:0051346,GO:0051606,GO:0051608,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0065009,GO:0070566,GO:0070733,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0098542,GO:0098827,GO:0140096,GO:1900101,GO:1901265,GO:1901363,GO:1901564,GO:1903894,GO:1905897
Exons1
Evalue8.21e-13
EggNOG OGsCOG3177@1|root,KOG3824@2759|Eukaryota
Descriptionprotein adenylyltransferase activity
Cds size285
COG categoryL
BRITEko00000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.4195888-CDS-P-wetherbeei_contig11649:856..11411683185920.4195888-CDS-P-wetherbeei_contig11649:856..1141Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11649 857..1141 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11649.1.1prot_P-wetherbeei_contig11649.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11649 857..1141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11649.1.1

>prot_P-wetherbeei_contig11649.1.1 ID=prot_P-wetherbeei_contig11649.1.1|Name=mRNA_P-wetherbeei_contig11649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
DGNLVSAGCYWTTKVYAGTHYRLLEGGGHAAFNDARGSIHLLQLAADLYF
DTTTIHPFQDGNGHLFRLLVSYAFMCCDTPSPVILTNGHSRAAKH
back to top

mRNA from alignment at P-wetherbeei_contig11649:857..1141+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11649.1.1 ID=mRNA_P-wetherbeei_contig11649.1.1|Name=mRNA_P-wetherbeei_contig11649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig11649:857..1141+ (Phaeothamnion wetherbeei SAG_119_79)
GACGGCAACCTTGTCAGCGCGGGCTGCTACTGGACGACCAAGGTCTATGC
CGGAACCCACTACAGGCTCCTCGAGGGCGGCGGCCATGCAGCGTTTAACG
ATGCGCGGGGCAGCATCCACCTGCTGCAACTCGCTGCCGACCTGTATTTC
GATACAACCACCATCCACCCGTTTCAAGACGGCAACGGGCACCTGTTCAG
GCTGCTCGTCAGCTACGCGTTCATGTGCTGCGACACACCGTCCCCGGTGA
TTCTGACCAACGGCCACAGCAGAGCCGCCAAGCAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11649:857..1141+

>mRNA_P-wetherbeei_contig11649.1.1 ID=mRNA_P-wetherbeei_contig11649.1.1|Name=mRNA_P-wetherbeei_contig11649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig11649:857..1141+ (Phaeothamnion wetherbeei SAG_119_79)
GACGGCAACCTTGTCAGCGCGGGCTGCTACTGGACGACCAAGGTCTATGC
CGGAACCCACTACAGGCTCCTCGAGGGCGGCGGCCATGCAGCGTTTAACG
ATGCGCGGGGCAGCATCCACCTGCTGCAACTCGCTGCCGACCTGTATTTC
GATACAACCACCATCCACCCGTTTCAAGACGGCAACGGGCACCTGTTCAG
GCTGCTCGTCAGCTACGCGTTCATGTGCTGCGACACACCGTCCCCGGTGA
TTCTGACCAACGGCCACAGCAGAGCCGCCAAGCAC
back to top