prot_P-wetherbeei_contig11647.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11647.1.1
Unique Nameprot_P-wetherbeei_contig11647.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length155
Homology
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A7C4TNE3_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TNE3_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 1.660e-69
Identity = 105/155 (67.74%), Postives = 128/155 (82.58%), Query Frame = 0
Query:    1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            MAD V+IKA+ARP +G GAAR+ RR GKVPGVIYG  S+P  I VD NE  K + RGRF++TIF++ VDGKKSRV+PRD+QLDPVKD+P+H+DFQRV+P SR+RV VP RF+N+  SPG+KRGGVLN+VRREIEV CP +AIP  F+F L GLEI
Sbjct:    1 MADTVEIKATARPATGTGAARSVRRAGKVPGVIYGDGSEPQTIAVDHNELLKLMNRGRFMSTIFDLSVDGKKSRVLPRDIQLDPVKDLPIHIDFQRVSPTSRVRVNVPVRFVNEALSPGLKRGGVLNIVRREIEVTCPANAIPEVFEFSLEGLEI 155          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A2W4TLL2_9PROT (50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TLL2_9PROT)

HSP 1 Score: 214 bits (546), Expect = 1.970e-68
Identity = 102/155 (65.81%), Postives = 126/155 (81.29%), Query Frame = 0
Query:    1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            MA+VV+I+A+ARPR+G G ARA RR+GK+P VIYG K +P  I +D NE WK VQ+GRFL+T+ ++++DG+K RV+PR++QLDPVKD+P+HVDFQRV     IRV VP RFIN+ ASPG+KRGGVLNVVR EIEV CPPD IP A   DLTGLEI
Sbjct:    1 MAEVVEIQATARPRAGTGGARAVRRQGKIPAVIYGEKKEPETIALDANELWKVVQKGRFLSTVLDVNIDGRKERVLPREVQLDPVKDLPIHVDFQRVGASDFIRVVVPVRFINEAASPGLKRGGVLNVVRHEIEVMCPPDRIPEAITVDLTGLEI 155          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A6I0EDP3_HYPSQ (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EDP3_HYPSQ)

HSP 1 Score: 215 bits (547), Expect = 5.500e-68
Identity = 103/151 (68.21%), Postives = 123/151 (81.46%), Query Frame = 0
Query:    5 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            +++KA+ARPR+GKGAAR ARREGKVP VIYG    P  I +D+NE WK V +G F +T+FE+DV+GKKSRVIPRDLQ+DPVKD PVHVDF R+  + RIRV+VP RFINDQ SPG+KRGGVLN+VR +IEV CP D IP  F+ DLTGLEI
Sbjct:    6 IELKATARPRAGKGAARQARREGKVPAVIYGDGQSPETIALDYNELWKQVLKGHFTSTVFELDVEGKKSRVIPRDLQVDPVKDQPVHVDFMRIGKDGRIRVEVPVRFINDQLSPGLKRGGVLNIVRHDIEVICPYDHIPAFFEIDLTGLEI 156          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: UPI0009313820 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009313820)

HSP 1 Score: 213 bits (543), Expect = 1.960e-67
Identity = 99/151 (65.56%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    5 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            +++KA+ARPR+GKGAAR ARREGKVP VIYG    PV I +D+N+ W+ V +G F +T+ +IDV+G KSRVIPRDLQ+DPVKD+PVHVDF R+  + RIRV+VP RF+NDQASPG+KRGGVLN+VR ++EV CP D IP  F+ DLTGLEI
Sbjct:    6 IELKATARPRAGKGAARQARREGKVPAVIYGNGETPVAIALDYNDLWRQVLKGHFTSTVLDIDVEGTKSRVIPRDLQVDPVKDLPVHVDFMRIASDGRIRVEVPVRFVNDQASPGLKRGGVLNIVRHDVEVICPWDHIPPYFEIDLTGLEI 156          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A6I3KSG0_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KSG0_9HYPH)

HSP 1 Score: 213 bits (541), Expect = 5.070e-67
Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    5 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            +++KA+ARPR+GKGAAR ARREGKVP VIYG    P+ IV+D+N+ WK V +G F +T+ ++DVDG K+RVIPRDLQ+DPVKD P+HVDF R+  + RIRV+VP RFINDQ SPG+KRGGVLN+VR +IEV CP D IPL F+ DLTGLEI
Sbjct:    6 IELKATARPRAGKGAARQARREGKVPAVIYGNGETPLTIVLDYNDLWKQVIKGHFTSTVLDVDVDGTKNRVIPRDLQVDPVKDQPIHVDFMRIGKDGRIRVEVPVRFINDQLSPGLKRGGVLNIVRHDIEVICPYDHIPLYFEIDLTGLEI 156          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A2W4N313_9PROT (50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4N313_9PROT)

HSP 1 Score: 211 bits (536), Expect = 6.980e-67
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0
Query:    1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            M +VV+I A+ARPR+GKGAARA RR+GKVP VIYG K +P  I +D +E    +QRGRFL+T+F+I++DG+K RV+PRD+Q DPVKDIP+HVDFQRV     +RV VP RFIN+ ASPG+KRGGVLN+VR EIEV CPPD IP  F  DLTGLEI
Sbjct:    1 MVEVVEIAATARPRAGKGAARAVRRQGKVPAVIYGEKQEPETIAIDTSELISVLQRGRFLSTVFDINIDGQKRRVLPRDVQFDPVKDIPIHVDFQRVGASEHVRVVVPVRFINEGASPGLKRGGVLNIVRHEIEVICPPDRIPEYFTVDLTGLEI 155          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: UPI0019A1EB46 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019A1EB46)

HSP 1 Score: 207 bits (526), Expect = 1.080e-64
Identity = 95/152 (62.50%), Postives = 123/152 (80.92%), Query Frame = 0
Query:    4 VVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            ++++KA+ARPR+GKGAAR ARREGKVPGVIYG    P  + ++F + WK V +G F +T+FE++V+G KSRVIPRDLQLDP+KD+P+HVDF R+  + RIRV+VP RFIN+  SPG+KRGGVLN+VR ++EV CP D IP  F+ DLTGLEI
Sbjct:    5 LIELKATARPRAGKGAARQARREGKVPGVIYGDGQPPQTVALEFTDLWKQVTKGHFTSTVFEVNVEGSKSRVIPRDLQLDPIKDLPIHVDFMRIGKDGRIRVEVPVRFINETLSPGLKRGGVLNIVRHDVEVICPYDHIPPYFEVDLTGLEI 156          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A833FZJ5_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833FZJ5_9HYPH)

HSP 1 Score: 204 bits (520), Expect = 8.000e-64
Identity = 97/155 (62.58%), Postives = 122/155 (78.71%), Query Frame = 0
Query:    1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            MA   +IKASARPR+G G ARAARREG+VP V+YG   +P  + VD+ E  K V RG+FL+T+F ++VDGK +RVIPR++Q+DPVKD+PVHVDFQR+  E RIRV VP +FI++  SPG+KRGGVLN+VR E+EV CP DAIP  F+F L GLEI
Sbjct:    1 MAQASEIKASARPRAGTGGARAARREGRVPAVVYGDAREPENVTVDYAELVKLVARGKFLSTVFNLEVDGKTTRVIPREVQVDPVKDLPVHVDFQRIGAEGRIRVNVPVKFIHENLSPGLKRGGVLNIVRHEVEVICPADAIPAQFEFSLEGLEI 155          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A849TKN4_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TKN4_9HYPH)

HSP 1 Score: 203 bits (517), Expect = 1.840e-63
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 0
Query:    6 QIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            +IKA ARPR+GKGAAR  RREG VPGVIYG K   V + +D       + +G+FL+T+F +DVDG K+RVIPRD+QLDPVKD P+HVDFQRVT  SRIRV VP +F+N+ ASPG+KRGGVLN+VR ++EV C PD IP +FDFDLTGLEI
Sbjct:    5 EIKAKARPRAGKGAARQVRREGLVPGVIYGDKEAAVTVALDSRALSLIISKGKFLSTLFMLDVDGAKTRVIPRDVQLDPVKDFPLHVDFQRVTSTSRIRVSVPCKFVNEAASPGLKRGGVLNIVRHDVEVMCAPDHIPASFDFDLTGLEI 154          
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A109B8K9_HYPSL (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109B8K9_HYPSL)

HSP 1 Score: 196 bits (499), Expect = 3.870e-61
Identity = 95/152 (62.50%), Postives = 117/152 (76.97%), Query Frame = 0
Query:    4 VVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 155
            V+++KA+ARPR+GKGAAR ARR+G VP VIYG    P  I +DFN+ WK V +G F +T+ EID +GKKS VIPRDLQLDPVKDIP+HVD  R+  + RIRV VP RFIN+  SPG+KRGGVLN+VR E+EV CP + IP  F+ DL G+EI
Sbjct:    3 VIEMKATARPRAGKGAARQARRDGNVPAVIYGAGEAPETISLDFNDLWKQVLKGHFTSTVLEIDCEGKKSLVIPRDLQLDPVKDIPLHVDLLRIGKDGRIRVAVPVRFINEALSPGLKRGGVLNIVRHEVEVICPYNHIPSVFEIDLEGVEI 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TNE3_9HYPH1.660e-6967.7450S ribosomal protein L25 n=1 Tax=Hyphomicrobiales... [more]
A0A2W4TLL2_9PROT1.970e-6865.8150S ribosomal protein L25 n=1 Tax=Proteobacteria b... [more]
A0A6I0EDP3_HYPSQ5.500e-6868.2150S ribosomal protein L25 n=1 Tax=Hyphomicrobium s... [more]
UPI00093138201.960e-6765.5650S ribosomal protein L25/general stress protein C... [more]
A0A6I3KSG0_9HYPH5.070e-6766.2350S ribosomal protein L25 n=1 Tax=Hyphomicrobium a... [more]
A0A2W4N313_9PROT6.980e-6765.8150S ribosomal protein L25 n=1 Tax=Proteobacteria b... [more]
UPI0019A1EB461.080e-6462.5050S ribosomal protein L25/general stress protein C... [more]
A0A833FZJ5_9HYPH8.000e-6462.5850S ribosomal protein L25 n=1 Tax=Hyphomicrobiacea... [more]
A0A849TKN4_9HYPH1.840e-6365.3350S ribosomal protein L25 n=1 Tax=Hyphomicrobiacea... [more]
A0A109B8K9_HYPSL3.870e-6162.5050S ribosomal protein L25 n=1 Tax=Hyphomicrobium s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029751Ribosomal protein L25PFAMPF01386Ribosomal_L25pcoord: 9..94
e-value: 3.4E-25
score: 88.4
IPR029751Ribosomal protein L25CDDcd00495Ribosomal_L25_TL5_CTCcoord: 6..96
e-value: 4.49903E-34
score: 112.949
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, N-terminalGENE3D2.40.240.10Ribosomal Protein L25; Chain Pcoord: 4..97
e-value: 1.5E-27
score: 97.5
IPR001021Ribosomal protein L25, long-formTIGRFAMTIGR00731TIGR00731coord: 8..154
e-value: 1.5E-34
score: 117.2
IPR001021Ribosomal protein L25, long-formHAMAPMF_01334Ribosomal_L25_CTCcoord: 5..155
score: 20.701427
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 103..155
e-value: 3.8E-13
score: 49.6
IPR037121Ribosomal protein L25, C-terminalGENE3D2.170.120.20Ribosomal protein L25, beta domaincoord: 100..155
e-value: 1.5E-11
score: 46.3
NoneNo IPR availablePANTHERPTHR33284:SF1RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 6..154
NoneNo IPR availablePANTHERPTHR33284RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 6..154
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 5..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11647contigP-wetherbeei_contig11647:1..465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11647.1.1mRNA_P-wetherbeei_contig11647.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11647 1..465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11647.1.1 ID=prot_P-wetherbeei_contig11647.1.1|Name=mRNA_P-wetherbeei_contig11647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEF
WKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPE
SRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDL
TGLEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029751Ribosomal_L25
IPR020056Rbsml_L25/Gln-tRNA_synth_N
IPR001021Ribosomal_L25_long
IPR020057Ribosomal_L25_b-dom
IPR037121Ribosomal_L25_C
IPR011035Ribosomal_L25/Gln-tRNA_synth