mRNA_P-wetherbeei_contig11647.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A7C4TNE3_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TNE3_9HYPH) HSP 1 Score: 219 bits (558), Expect = 1.660e-69 Identity = 105/155 (67.74%), Postives = 128/155 (82.58%), Query Frame = 1 Query: 1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 MAD V+IKA+ARP +G GAAR+ RR GKVPGVIYG S+P I VD NE K + RGRF++TIF++ VDGKKSRV+PRD+QLDPVKD+P+H+DFQRV+P SR+RV VP RF+N+ SPG+KRGGVLN+VRREIEV CP +AIP F+F L GLEI Sbjct: 1 MADTVEIKATARPATGTGAARSVRRAGKVPGVIYGDGSEPQTIAVDHNELLKLMNRGRFMSTIFDLSVDGKKSRVLPRDIQLDPVKDLPIHIDFQRVSPTSRVRVNVPVRFVNEALSPGLKRGGVLNIVRREIEVTCPANAIPEVFEFSLEGLEI 155
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A2W4TLL2_9PROT (50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TLL2_9PROT) HSP 1 Score: 214 bits (546), Expect = 1.970e-68 Identity = 102/155 (65.81%), Postives = 126/155 (81.29%), Query Frame = 1 Query: 1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 MA+VV+I+A+ARPR+G G ARA RR+GK+P VIYG K +P I +D NE WK VQ+GRFL+T+ ++++DG+K RV+PR++QLDPVKD+P+HVDFQRV IRV VP RFIN+ ASPG+KRGGVLNVVR EIEV CPPD IP A DLTGLEI Sbjct: 1 MAEVVEIQATARPRAGTGGARAVRRQGKIPAVIYGEKKEPETIALDANELWKVVQKGRFLSTVLDVNIDGRKERVLPREVQLDPVKDLPIHVDFQRVGASDFIRVVVPVRFINEAASPGLKRGGVLNVVRHEIEVMCPPDRIPEAITVDLTGLEI 155
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A6I0EDP3_HYPSQ (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EDP3_HYPSQ) HSP 1 Score: 215 bits (547), Expect = 5.500e-68 Identity = 103/151 (68.21%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 13 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 +++KA+ARPR+GKGAAR ARREGKVP VIYG P I +D+NE WK V +G F +T+FE+DV+GKKSRVIPRDLQ+DPVKD PVHVDF R+ + RIRV+VP RFINDQ SPG+KRGGVLN+VR +IEV CP D IP F+ DLTGLEI Sbjct: 6 IELKATARPRAGKGAARQARREGKVPAVIYGDGQSPETIALDYNELWKQVLKGHFTSTVFELDVEGKKSRVIPRDLQVDPVKDQPVHVDFMRIGKDGRIRVEVPVRFINDQLSPGLKRGGVLNIVRHDIEVICPYDHIPAFFEIDLTGLEI 156
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: UPI0009313820 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009313820) HSP 1 Score: 213 bits (543), Expect = 1.960e-67 Identity = 99/151 (65.56%), Postives = 124/151 (82.12%), Query Frame = 1 Query: 13 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 +++KA+ARPR+GKGAAR ARREGKVP VIYG PV I +D+N+ W+ V +G F +T+ +IDV+G KSRVIPRDLQ+DPVKD+PVHVDF R+ + RIRV+VP RF+NDQASPG+KRGGVLN+VR ++EV CP D IP F+ DLTGLEI Sbjct: 6 IELKATARPRAGKGAARQARREGKVPAVIYGNGETPVAIALDYNDLWRQVLKGHFTSTVLDIDVEGTKSRVIPRDLQVDPVKDLPVHVDFMRIASDGRIRVEVPVRFVNDQASPGLKRGGVLNIVRHDVEVICPWDHIPPYFEIDLTGLEI 156
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A6I3KSG0_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KSG0_9HYPH) HSP 1 Score: 213 bits (541), Expect = 5.070e-67 Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1 Query: 13 VQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 +++KA+ARPR+GKGAAR ARREGKVP VIYG P+ IV+D+N+ WK V +G F +T+ ++DVDG K+RVIPRDLQ+DPVKD P+HVDF R+ + RIRV+VP RFINDQ SPG+KRGGVLN+VR +IEV CP D IPL F+ DLTGLEI Sbjct: 6 IELKATARPRAGKGAARQARREGKVPAVIYGNGETPLTIVLDYNDLWKQVIKGHFTSTVLDVDVDGTKNRVIPRDLQVDPVKDQPIHVDFMRIGKDGRIRVEVPVRFINDQLSPGLKRGGVLNIVRHDIEVICPYDHIPLYFEIDLTGLEI 156
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A2W4N313_9PROT (50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4N313_9PROT) HSP 1 Score: 211 bits (536), Expect = 6.980e-67 Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 1 Query: 1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 M +VV+I A+ARPR+GKGAARA RR+GKVP VIYG K +P I +D +E +QRGRFL+T+F+I++DG+K RV+PRD+Q DPVKDIP+HVDFQRV +RV VP RFIN+ ASPG+KRGGVLN+VR EIEV CPPD IP F DLTGLEI Sbjct: 1 MVEVVEIAATARPRAGKGAARAVRRQGKVPAVIYGEKQEPETIAIDTSELISVLQRGRFLSTVFDINIDGQKRRVLPRDVQFDPVKDIPIHVDFQRVGASEHVRVVVPVRFINEGASPGLKRGGVLNIVRHEIEVICPPDRIPEYFTVDLTGLEI 155
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: UPI0019A1EB46 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019A1EB46) HSP 1 Score: 207 bits (526), Expect = 1.080e-64 Identity = 95/152 (62.50%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 10 VVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 ++++KA+ARPR+GKGAAR ARREGKVPGVIYG P + ++F + WK V +G F +T+FE++V+G KSRVIPRDLQLDP+KD+P+HVDF R+ + RIRV+VP RFIN+ SPG+KRGGVLN+VR ++EV CP D IP F+ DLTGLEI Sbjct: 5 LIELKATARPRAGKGAARQARREGKVPGVIYGDGQPPQTVALEFTDLWKQVTKGHFTSTVFEVNVEGSKSRVIPRDLQLDPIKDLPIHVDFMRIGKDGRIRVEVPVRFINETLSPGLKRGGVLNIVRHDVEVICPYDHIPPYFEVDLTGLEI 156
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A833FZJ5_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833FZJ5_9HYPH) HSP 1 Score: 204 bits (520), Expect = 8.000e-64 Identity = 97/155 (62.58%), Postives = 122/155 (78.71%), Query Frame = 1 Query: 1 MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 MA +IKASARPR+G G ARAARREG+VP V+YG +P + VD+ E K V RG+FL+T+F ++VDGK +RVIPR++Q+DPVKD+PVHVDFQR+ E RIRV VP +FI++ SPG+KRGGVLN+VR E+EV CP DAIP F+F L GLEI Sbjct: 1 MAQASEIKASARPRAGTGGARAARREGRVPAVVYGDAREPENVTVDYAELVKLVARGKFLSTVFNLEVDGKTTRVIPREVQVDPVKDLPVHVDFQRIGAEGRIRVNVPVKFIHENLSPGLKRGGVLNIVRHEVEVICPADAIPAQFEFSLEGLEI 155
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A849TKN4_9HYPH (50S ribosomal protein L25 n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TKN4_9HYPH) HSP 1 Score: 203 bits (517), Expect = 1.840e-63 Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 16 QIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 +IKA ARPR+GKGAAR RREG VPGVIYG K V + +D + +G+FL+T+F +DVDG K+RVIPRD+QLDPVKD P+HVDFQRVT SRIRV VP +F+N+ ASPG+KRGGVLN+VR ++EV C PD IP +FDFDLTGLEI Sbjct: 5 EIKAKARPRAGKGAARQVRREGLVPGVIYGDKEAAVTVALDSRALSLIISKGKFLSTLFMLDVDGAKTRVIPRDVQLDPVKDFPLHVDFQRVTSTSRIRVSVPCKFVNEAASPGLKRGGVLNIVRHDVEVMCAPDHIPASFDFDLTGLEI 154
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Match: A0A109B8K9_HYPSL (50S ribosomal protein L25 n=1 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109B8K9_HYPSL) HSP 1 Score: 196 bits (499), Expect = 3.870e-61 Identity = 95/152 (62.50%), Postives = 117/152 (76.97%), Query Frame = 1 Query: 10 VVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFWKTVQRGRFLATIFEIDVDGKKSRVIPRDLQLDPVKDIPVHVDFQRVTPESRIRVKVPARFINDQASPGIKRGGVLNVVRREIEVFCPPDAIPLAFDFDLTGLEI 465 V+++KA+ARPR+GKGAAR ARR+G VP VIYG P I +DFN+ WK V +G F +T+ EID +GKKS VIPRDLQLDPVKDIP+HVD R+ + RIRV VP RFIN+ SPG+KRGGVLN+VR E+EV CP + IP F+ DL G+EI Sbjct: 3 VIEMKATARPRAGKGAARQARRDGNVPAVIYGAGEAPETISLDFNDLWKQVLKGHFTSTVLEIDCEGKKSLVIPRDLQLDPVKDIPLHVDLLRIGKDGRIRVAVPVRFINEALSPGLKRGGVLNIVRHEVEVICPYNHIPSVFEIDLEGVEI 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11647.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11647.1.1 >prot_P-wetherbeei_contig11647.1.1 ID=prot_P-wetherbeei_contig11647.1.1|Name=mRNA_P-wetherbeei_contig11647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MADVVQIKASARPRSGKGAARAARREGKVPGVIYGGKSDPVGIVVDFNEFback to top mRNA from alignment at P-wetherbeei_contig11647:1..465- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11647.1.1 ID=mRNA_P-wetherbeei_contig11647.1.1|Name=mRNA_P-wetherbeei_contig11647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig11647:1..465- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11647:1..465- >mRNA_P-wetherbeei_contig11647.1.1 ID=mRNA_P-wetherbeei_contig11647.1.1|Name=mRNA_P-wetherbeei_contig11647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig11647:1..465- (Phaeothamnion wetherbeei SAG_119_79)back to top |