mRNA_P-wetherbeei_contig1164.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1164.2.1
Unique NamemRNA_P-wetherbeei_contig1164.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: E1ZEJ1_CHLVA (Macro domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZEJ1_CHLVA)

HSP 1 Score: 191 bits (484), Expect = 4.190e-59
Identity = 92/155 (59.35%), Postives = 121/155 (78.06%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFGR 465
            LV+R GD+T++ G+AIVNAAN RMLGGGGVDGAIHR AGP L + C + PEV +GVRCP GEAR+T G  LPA+ VIHTVGPVY +A  SAP+L  AYR+SL+LA ++G+K+VAFPAISCG++ YP  +AA +A+    +  G ++ + F+LFG+
Sbjct:   16 LVLRRGDLTKFAGDAIVNAANERMLGGGGVDGAIHRAAGPSLLEACRQVPEVRQGVRCPTGEARMTTGAGLPARNVIHTVGPVYHNAEASAPLLESAYRSSLQLANQHGLKTVAFPAISCGIFGYPFDEAAEIAVRTCQQEAGQLQEIHFFLFGQ 170          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A250XK20_9CHLO (Macro domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XK20_9CHLO)

HSP 1 Score: 191 bits (485), Expect = 1.270e-58
Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFGRE 468
            LV+ +GD+T ++G+AIVNAAN RMLGGGGVDGAIHR AG  L +EC + PEV  GVRCP G+ARIT G++LPAK+VIHTVGP+Y S AESAP+LA+AY++SL+LA ++ +K+VAFPAIS GV+ YP   AA V++  VA   G V  V F LFG +
Sbjct:   51 LVLVQGDLTEFQGDAIVNAANERMLGGGGVDGAIHRAAGRELYEECLKVPEVEEGVRCPTGQARITKGYKLPAKYVIHTVGPIYESDAESAPLLANAYKSSLQLANEHNLKTVAFPAISTGVFGYPKYKAAEVSLKAVADAIGEVREVHFILFGSD 206          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A2P6VKT9_9CHLO (O-acetyl-ADP-ribose deacetylase MACROD2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKT9_9CHLO)

HSP 1 Score: 186 bits (472), Expect = 3.360e-57
Identity = 92/156 (58.97%), Postives = 117/156 (75.00%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFGRE 468
            L +R GD+T++ G AIVNAAN RMLGGGGVDGAIHR AGP L + C + PEV RGVRCP GEAR+T G  LPA+ VIHTVGPVYSS A SAP+L  AY +SL LA ++ ++ VAFPAISCGV+ YP  ++A +A+    R  G ++ + F+LFG++
Sbjct:   15 LAIRRGDLTKFDGCAIVNAANERMLGGGGVDGAIHRAAGPALLEACKQVPEVRRGVRCPRGEARVTPGGDLPARHVIHTVGPVYSSPATSAPLLEGAYASSLRLANEHKLERVAFPAISCGVFGYPLDESAEIAVRTSQREAGSLQEIHFFLFGQK 170          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A2E4JD77_9BACT (O-acetyl-ADP-ribose deacetylase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4JD77_9BACT)

HSP 1 Score: 180 bits (457), Expect = 2.990e-55
Identity = 92/154 (59.74%), Postives = 110/154 (71.43%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFG 462
            L + EGD+T+   + IVNAAN R+LGGGGVDGAIHR AGP L + C   PEV  GVRCP GEA IT G  LPA+ VIHTVGPVY SA  SAP+L  AYR++L+LA   G+ ++AFPAISCGVY YP +DAA +A+DV   H G +E   F L G
Sbjct:    7 LFIEEGDLTKADVDVIVNAANERLLGGGGVDGAIHRAAGPKLLEACRALPEVRPGVRCPTGEACITPGFNLPARNVIHTVGPVYQSAQVSAPLLRAAYRSALKLANARGLATIAFPAISCGVYGYPASDAARIAIDVARAHAGRLEKTHFILVG 160          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A383V8U4_TETOB (Macro domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V8U4_TETOB)

HSP 1 Score: 184 bits (467), Expect = 4.930e-55
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLF 459
            LV+ +GDIT++ G+A+VNAAN RMLGGGGVDGAIHR AGP LR  C + PEV   VRCP GEARIT   RL AKFVIHTVGPVY +A ESAP+L  AY + L LA K  ++++AFPAIS GVY YPPA+AA VA+  V    G +  VEF LF
Sbjct:   16 LVLSQGDITQWSGDALVNAANERMLGGGGVDGAIHRAAGPRLRAACEQVPEVAPDVRCPTGEARITSAGRLQAKFVIHTVGPVYKNAEESAPLLRQAYLSCLALANKQRLENLAFPAISTGVYGYPPAEAAEVALTAVKDGMGTLSYVEFVLF 168          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A2J8A0B2_9CHLO (Macro domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A0B2_9CHLO)

HSP 1 Score: 181 bits (460), Expect = 2.220e-54
Identity = 98/162 (60.49%), Postives = 116/162 (71.60%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVV------ARHRGGVETVEFYLFGRE 468
            L+V++GDITR   +AIVNAAN RMLGGGGVDGAIHR AGPGL   CAE PEV+ GVRCP GEARITGG  LPA+ VIHTVGP+Y +   SAP+LA AYR+SL LA ++G+ S++FP IS GVY YP   AA V+M  V      A   G +  V F +FG E
Sbjct:   69 LIVKQGDITRESTDAIVNAANERMLGGGGVDGAIHRAAGPGLVRACAEHPEVSPGVRCPTGEARITGGFNLPARHVIHTVGPIYDNDRVSAPLLAAAYRSSLRLALQHGLTSISFPGISTGVYGYPYDKAAQVSMAAVDEVLAGAGAAGSLREVHFVMFGEE 230          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A7S3BGY7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BGY7_9VIRI)

HSP 1 Score: 180 bits (457), Expect = 3.250e-54
Identity = 97/158 (61.39%), Postives = 112/158 (70.89%), Query Frame = 1
Query:    1 LVVREGDITRYRG----EAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFG 462
            LV+ +GD+TR+ G    +AIVNAAN RMLGGGGVDGAIHR AGP L   C E  +V  GVRCP GEARITGG  LPA  VIHTVGP+Y S   S P+LA AY +SL LA ++ +K VAFPAISCGV+ YP  DAA VA+D  AR    +E V F LFG
Sbjct:   20 LVLCQGDLTRWAGAAKPDAIVNAANERMLGGGGVDGAIHRAAGPALYAACKEVEQVAPGVRCPTGEARITGGFELPAAHVIHTVGPIYESDEVSEPLLASAYASSLALANQSKLKEVAFPAISCGVFGYPQGDAAGVALDECARGVCDLEAVTFVLFG 177          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: W4FW15_9STRA (Macro domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW15_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.320e-54
Identity = 96/161 (59.63%), Postives = 114/161 (70.81%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVT-RGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMD----VVARHRGGVETVEFYLFGRE 468
            LVV  GDIT+++G+AIVNAAN RMLGGGGVDGAIHR AG  LR  C   P V    +RCP GEARITGG  LPAK VIHTVGP+Y + AES P+L  AY NSL LA ++G+ S+AFPAISCGV+ YP  DAA VA+D    V +     ++ +EF LF  E
Sbjct:   14 LVVSMGDITQWKGDAIVNAANQRMLGGGGVDGAIHRAAGQALRRACEAVPPVDGTSIRCPTGEARITGGFLLPAKHVIHTVGPIYKTKAESRPLLKAAYDNSLALALEHGLSSIAFPAISCGVFGYPLLDAAVVAVDACQRVASSSPNSIQAIEFVLFSPE 174          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A2D6R1D1_9BACT (O-acetyl-ADP-ribose deacetylase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2D6R1D1_9BACT)

HSP 1 Score: 177 bits (449), Expect = 4.910e-54
Identity = 89/154 (57.79%), Postives = 110/154 (71.43%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFG 462
            L + EGD+T +  +AIVNAAN  +LGGGGVDGAIHR AGP L + C   PEV+ GVRCP GEARIT G  L A+ VIHTVGP+Y SA  SAP L  AYR+SLELA ++ ++++A PAISCGVY YPP  AA +A++    H G +E + F L G
Sbjct:    7 LFIDEGDLTEFEVDAIVNAANEALLGGGGVDGAIHRAAGPELLEACRALPEVSPGVRCPTGEARITPGFNLTARHVIHTVGPMYRSANASAPFLRAAYRSSLELANEHHVRTIALPAISCGVYGYPPPAAAKIAVEAAHAHAGALEQIRFVLAG 160          
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Match: A0A2V0PGF0_9CHLO (Appr-1-p processing enzyme family n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PGF0_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 5.020e-54
Identity = 95/156 (60.90%), Postives = 114/156 (73.08%), Query Frame = 1
Query:    1 LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAPEVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRNSLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEFYLFGRE 468
            LV+ EGDIT + G+AIVNAAN RMLGGGGVDGAIHR AGP L + C + PEV   VRCP GEARIT G RL AK+VIHTVGP Y S  ESAP+LA AY++ L+LA K+ ++++AFPA+S G+Y YP  +AA VA   VA   G V  VEF L  R+
Sbjct:   70 LVLSEGDITSWSGDAIVNAANERMLGGGGVDGAIHRAAGPRLMEACQQVPEVRPDVRCPTGEARITRGGRLQAKYVIHTVGPRYESDEESAPLLAAAYKSCLDLANKHRLENIAFPALSTGIYGYPKKEAAEVAFKAVAAAAGAVRYVEFVLMPRD 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1164.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E1ZEJ1_CHLVA4.190e-5959.35Macro domain-containing protein n=1 Tax=Chlorella ... [more]
A0A250XK20_9CHLO1.270e-5861.54Macro domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A2P6VKT9_9CHLO3.360e-5758.97O-acetyl-ADP-ribose deacetylase MACROD2 n=1 Tax=Mi... [more]
A0A2E4JD77_9BACT2.990e-5559.74O-acetyl-ADP-ribose deacetylase n=1 Tax=Acidobacte... [more]
A0A383V8U4_TETOB4.930e-5562.75Macro domain-containing protein n=1 Tax=Tetradesmu... [more]
A0A2J8A0B2_9CHLO2.220e-5460.49Macro domain-containing protein n=1 Tax=Tetrabaena... [more]
A0A7S3BGY7_9VIRI3.250e-5461.39Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
W4FW15_9STRA3.320e-5459.63Macro domain-containing protein n=10 Tax=Aphanomyc... [more]
A0A2D6R1D1_9BACT4.910e-5457.79O-acetyl-ADP-ribose deacetylase n=2 Tax=Acidobacte... [more]
A0A2V0PGF0_9CHLO5.020e-5460.90Appr-1-p processing enzyme family n=1 Tax=Raphidoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1164contigP-wetherbeei_contig1164:198..862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog554065.XP_005847605.1
PFAMsMacro
Model size468
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.87e-60
EggNOG OGsCOG2110@1|root,KOG2633@2759|Eukaryota,37P9J@33090|Viridiplantae,34M1D@3041|Chlorophyta
Ec32 ortholog descriptionMacro domain
Ec32 orthologEc-22_002680.1
DescriptionAppr-1'-p processing enzyme
Cds size468
COG categoryBK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.119886-CDS-P-wetherbeei_contig1164:197..4431683185920.119886-CDS-P-wetherbeei_contig1164:197..443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1164 198..443 -
1683185920.128286-CDS-P-wetherbeei_contig1164:640..8621683185920.128286-CDS-P-wetherbeei_contig1164:640..862Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1164 641..862 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1164.2.1prot_P-wetherbeei_contig1164.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1164 198..862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1164.2.1

>prot_P-wetherbeei_contig1164.2.1 ID=prot_P-wetherbeei_contig1164.2.1|Name=mRNA_P-wetherbeei_contig1164.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
LVVREGDITRYRGEAIVNAANSRMLGGGGVDGAIHRMAGPGLRDECAEAP
EVTRGVRCPPGEARITGGHRLPAKFVIHTVGPVYSSAAESAPILADAYRN
SLELAGKNGIKSVAFPAISCGVYRYPPADAAAVAMDVVARHRGGVETVEF
YLFGRE
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mRNA from alignment at P-wetherbeei_contig1164:198..862-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1164.2.1 ID=mRNA_P-wetherbeei_contig1164.2.1|Name=mRNA_P-wetherbeei_contig1164.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=665bp|location=Sequence derived from alignment at P-wetherbeei_contig1164:198..862- (Phaeothamnion wetherbeei SAG_119_79)
CTCGTCGTCCGCGAGGGAGACATCACGCGGTATCGGGGCGAGGCCATCGT GAACGCCGCCAACAGCCGAATGCTCGGCGGTGGTGGCGTCGACGGCGCCA TCCACCGCATGGCCGGACCAGGGCTCAGGGACGAGTGCGCGGAGGCCCCT GAGGTGACGAGGGGTGTCCGCTGTCCCCCCGGCGAGGCGCGCATCACCGG CGGGCACAGGCTTCCGGCGAAGGTATTTTTACTCCAATGAATTCTTTTTT CTCGTCTGCCTTGGTTTTTTCTACGCGTGTTTTTGTCTTCCCCCGCAACG CGCCTTTTGCCTCTGCTCCTGATTTTTAAGAATTATCTGGGTAGTAAGGG CAACGATTTATCCCCATCCGTCCCCCTCCACGCTTCGTGAACTTGTTTCG CATTCCGCTCATGGTGCAGTTTGTCATCCACACTGTGGGACCCGTGTATT CGAGCGCCGCGGAGTCGGCCCCGATCCTGGCGGACGCCTACCGGAACTCG CTGGAACTGGCGGGCAAGAACGGGATCAAGAGCGTCGCGTTCCCGGCCAT CTCCTGCGGCGTCTACAGGTACCCGCCGGCGGACGCTGCAGCGGTGGCGA TGGACGTCGTGGCGCGGCACCGCGGCGGCGTAGAGACGGTCGAGTTTTAC CTTTTCGGGAGGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1164:198..862-

>mRNA_P-wetherbeei_contig1164.2.1 ID=mRNA_P-wetherbeei_contig1164.2.1|Name=mRNA_P-wetherbeei_contig1164.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig1164:198..862- (Phaeothamnion wetherbeei SAG_119_79)
CTCGTCGTCCGCGAGGGAGACATCACGCGGTATCGGGGCGAGGCCATCGT
GAACGCCGCCAACAGCCGAATGCTCGGCGGTGGTGGCGTCGACGGCGCCA
TCCACCGCATGGCCGGACCAGGGCTCAGGGACGAGTGCGCGGAGGCCCCT
GAGGTGACGAGGGGTGTCCGCTGTCCCCCCGGCGAGGCGCGCATCACCGG
CGGGCACAGGCTTCCGGCGAAGTTTGTCATCCACACTGTGGGACCCGTGT
ATTCGAGCGCCGCGGAGTCGGCCCCGATCCTGGCGGACGCCTACCGGAAC
TCGCTGGAACTGGCGGGCAAGAACGGGATCAAGAGCGTCGCGTTCCCGGC
CATCTCCTGCGGCGTCTACAGGTACCCGCCGGCGGACGCTGCAGCGGTGG
CGATGGACGTCGTGGCGCGGCACCGCGGCGGCGTAGAGACGGTCGAGTTT
TACCTTTTCGGGAGGGAA
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