mRNA_P-wetherbeei_contig11630.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A835Z5V7_9STRA (HSP20-like chaperone n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V7_9STRA) HSP 1 Score: 238 bits (606), Expect = 5.980e-76 Identity = 115/157 (73.25%), Postives = 135/157 (85.99%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTLSELSV +PVPPGTKSR++VC I+ + LK LKG ++DG+LH+KVIV+D WTLED +E++I LQK+N+MEWW VI+GD EIDTTKV PENSKLDDLDADTRKTVEKMMFDQRQKA+GLPTADEM KQE+L KFM QHPEMDFSKAKI+ Sbjct: 159 WTQTLSELSVTIPVPPGTKSRDVVCTISRQHLKAGLKGQPP-IVDGDLHKKVIVEDSFWTLEDAREISIALQKDNQMEWWKSVIQGDAEIDTTKVQPENSKLDDLDADTRKTVEKMMFDQRQKAMGLPTADEMQKQELLKKFMDQHPEMDFSKAKIN 314
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: D7FU75_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU75_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.980e-75 Identity = 118/157 (75.16%), Postives = 135/157 (85.99%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL ELSVVVPVP G+KSR++VCDIT RL+V LKG L+DGE++ KV VDD WTLEDGKEV+I LQKEN+MEWW CV+KGDPEI+T+KV PENSKL +LD +TRKTVEKMMFDQRQKA GLPTADEMSKQE+L KFM QHPEMDFS+AKIS Sbjct: 223 WTQTLQELSVVVPVPEGSKSRDVVCDITKSRLRVGLKGQPL-LVDGEMYNKVKVDDSFWTLEDGKEVSIALQKENQMEWWKCVVKGDPEINTSKVQPENSKLSELDGETRKTVEKMMFDQRQKAQGLPTADEMSKQEMLGKFMAQHPEMDFSRAKIS 378
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: W1PM11_AMBTC (CS domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PM11_AMBTC) HSP 1 Score: 228 bits (580), Expect = 4.720e-72 Identity = 108/157 (68.79%), Postives = 130/157 (82.80%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL E SV +P+PPGTKSR IVC+I + LKV LKG +IDGEL+Q V VDDC W+LEDGK +++LL K N+MEWW C++KG+PE+DT KV PENSKL DLD +TR+TVEKMMFDQRQK++GLPT+DEM KQEIL KFM QHPEMDFS+AKIS Sbjct: 155 WTQTLQEASVNIPIPPGTKSRFIVCEIKKKHLKVGLKGQPP-IIDGELYQPVKVDDCFWSLEDGKSISVLLTKHNQMEWWKCIVKGEPEVDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAQHPEMDFSRAKIS 310
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A812TJV4_SYMMI (NUDC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TJV4_SYMMI) HSP 1 Score: 221 bits (563), Expect = 1.550e-71 Identity = 106/157 (67.52%), Postives = 133/157 (84.71%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + Q+LSEL+VVVPVPPGTK+++I+ +I N+R+KV LKG + L+DGELH++VIVDD WTLED +EV I LQK+NKMEWWNCV++GDP I+T KV PENSKL DLD DTR+TVEKMM+DQRQKA+G PT++E KQ++L KFM+ HPEMDFS AK S Sbjct: 7 WTQSLSELNVVVPVPPGTKTKQILVEIKNKRIKVGLKG-EPPLVDGELHKRVIVDDSVWTLEDNREVAINLQKDNKMEWWNCVVEGDPTINTKKVQPENSKLADLDGDTRQTVEKMMYDQRQKAMGKPTSEEEKKQDMLKKFMEAHPEMDFSNAKFS 162
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A6I9RGY9_ELAGV (protein BOBBER 1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RGY9_ELAGV) HSP 1 Score: 219 bits (559), Expect = 7.310e-69 Identity = 104/157 (66.24%), Postives = 128/157 (81.53%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL E++V +PVP GTKSR + C+I LKV LKG +IDG+L+Q V DDC W++EDGK ++ILL K+N+MEWW C++KGDPEIDT KV PENSKL DLD +TR+TVEKMMFDQRQKA+GLPT+DEM KQEIL +FM QHPEMDFS+AKI+ Sbjct: 157 WTQTLQEVTVNIPVPQGTKSRFVACEIKKNHLKVGLKGQPP-IIDGDLYQSVRADDCFWSIEDGKSISILLTKQNQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTSDEMQKQEILKQFMAQHPEMDFSRAKIA 312
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A438DEF2_VITVI (Protein BOBBER 1 n=3 Tax=Vitis TaxID=3603 RepID=A0A438DEF2_VITVI) HSP 1 Score: 219 bits (557), Expect = 7.350e-69 Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 ++QTL E++V VPVPPGTKSR IVCDI LKV LKG +IDGEL + + DDC W+LED K V+ILL K N+MEWW ++KGDPEIDT KV PENSKL DLD +TR+TVEKMMFDQRQK +GLPT+DEM KQEIL KFM +HPEMDFS+AKIS Sbjct: 134 WMQTLQEVTVTVPVPPGTKSRFIVCDIKKNHLKVGLKGHPP-IIDGELSKPIKPDDCFWSLEDQKSVSILLTKHNQMEWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKTMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS 289
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A3S3N029_9MAGN (Protein BOBBER 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N029_9MAGN) HSP 1 Score: 214 bits (546), Expect = 8.340e-69 Identity = 104/157 (66.24%), Postives = 129/157 (82.17%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL E+SV VPVP GTKSR +VC+I +LKV LKG +I+GEL Q V VDDC W++ED K ++ILL K+N+MEWW C++KGDP+IDT KV PENSKL DLD +TR+TVEKMMFDQRQK++GLPT+DE+ KQEIL KFM +HPEMDFS+AKI+ Sbjct: 17 WTQTLQEVSVNVPVPKGTKSRFVVCEIKKNQLKVGLKGQPP-VINGELFQSVKVDDCFWSIEDEKFISILLTKQNQMEWWKCLVKGDPQIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEVQKQEILKKFMAEHPEMDFSRAKIA 172
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A5B7AHM8_DAVIN (CS domain-containing protein n=6 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7AHM8_DAVIN) HSP 1 Score: 218 bits (556), Expect = 1.040e-68 Identity = 105/155 (67.74%), Postives = 125/155 (80.65%), Query Frame = 1 Query: 7 QTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 Q+L E+++ +PVPPGTKSR I CDI LKV LKG +IDGEL Q V VDDC W+LED K +++LL K N+MEWW C++KGDPEIDT KV PENSKL DLD +TR+TVEKMMFDQRQK +GLPT+DEM KQEIL KFM +HPEMDFS+AKI+ Sbjct: 136 QSLQEVTINIPVPPGTKSRFIACDIKKNHLKVELKGQPP-IIDGELFQSVKVDDCFWSLEDQKSISVLLTKHNQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKTMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIN 289
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: A0A8B7CYY2_PHODC (protein BOBBER 1-like n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B7CYY2_PHODC) HSP 1 Score: 219 bits (557), Expect = 1.470e-68 Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL E++V +PVP GTKSR ++C+I LK LKG +IDG+L+Q V +DC W++EDGK ++ILL K+N+MEWW C++KGDPEIDT KV PENSKL DLD +TR+TVEKMMFDQRQKA+GLPT DEM KQEIL KFM QHPEMDFSKAKI+ Sbjct: 157 WTQTLQEVTVNIPVPQGTKSRFVMCEIKKNHLKFGLKGQPP-IIDGDLYQSVKAEDCFWSIEDGKSISILLTKQNQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTTDEMQKQEILKKFMAQHPEMDFSKAKIA 312
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Match: UPI001CFA4FFE (protein BOBBER 1-like n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA4FFE) HSP 1 Score: 217 bits (553), Expect = 4.010e-68 Identity = 106/157 (67.52%), Postives = 126/157 (80.25%), Query Frame = 1 Query: 1 YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQKVIVDDCCWTLEDGKEVNILLQKENKMEWWNCVIKGDPEIDTTKVVPENSKLDDLDADTRKTVEKMMFDQRQKALGLPTADEMSKQEILNKFMKQHPEMDFSKAKIS 471 + QTL ELS++VPVP GTKSR +VC+I LKV LKG +IDGEL Q V DDC W++ED ++ILL K+N+MEWW ++KGDPEIDT KV PENSKL DLD +TRKTVEKMMFDQRQK++GLPT+DEM KQEIL KFM +HPEMDFS+AKIS Sbjct: 144 WTQTLQELSIIVPVPNGTKSRFVVCEIKKNHLKVGLKGQPP-IIDGELSQNVKPDDCYWSIEDQNSISILLTKQNQMEWWKSLLKGDPEIDTQKVEPENSKLSDLDPETRKTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS 299 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11630.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11630.1.1 >prot_P-wetherbeei_contig11630.1.1 ID=prot_P-wetherbeei_contig11630.1.1|Name=mRNA_P-wetherbeei_contig11630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp YLQTLSELSVVVPVPPGTKSREIVCDITNRRLKVALKGADKHLIDGELHQback to top mRNA from alignment at P-wetherbeei_contig11630:134..1845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11630.1.1 ID=mRNA_P-wetherbeei_contig11630.1.1|Name=mRNA_P-wetherbeei_contig11630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1712bp|location=Sequence derived from alignment at P-wetherbeei_contig11630:134..1845+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11630:134..1845+ >mRNA_P-wetherbeei_contig11630.1.1 ID=mRNA_P-wetherbeei_contig11630.1.1|Name=mRNA_P-wetherbeei_contig11630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig11630:134..1845+ (Phaeothamnion wetherbeei SAG_119_79)back to top |