mRNA_P-wetherbeei_contig1161.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: L1IE62_GUITC (Flavin_Reduct domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC) HSP 1 Score: 266 bits (681), Expect = 1.170e-84 Identity = 127/209 (60.77%), Postives = 157/209 (75.12%), Query Frame = 2 Query: 272 VQLRPQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDR 898 V L P +LKS Y L+ISA VPRPIA +S+ A G+ N+APYSY A+SHDPP + VSCCRK G V KD+ NI T E V+NI+SEW+ E+ANHTCG FPPEVNEM +AGL P PS+ + PP VAESA++ EC++ H +D+KNA G+VT TVVI E+V FHV EGVL G GEG+PTV+ +P+ RLGG TYGR T++FDLPR DR Sbjct: 53 VTLLPSELKSCYPLIISAYVPRPIALVSSKSAAGHVNVAPYSYTGAISHDPPAIVVSCCRKAGDVMKDTLANILDTKEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRLIHQYDMKNAQGKVTTTVVIGEIVAFHVHEGVLEMNGAGEGKPTVNFDALKPLSRLGGCTYGRTTAVFDLPRLDR 261
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: C1N2T0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N2T0_MICPC) HSP 1 Score: 260 bits (665), Expect = 5.950e-83 Identity = 124/210 (59.05%), Postives = 157/210 (74.76%), Query Frame = 2 Query: 284 PQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDRPSGGR 913 P+DLKS Y L+ISAVVPRPIAF+S++ ADG GNL+P+SY +SHDPP + S CRKPGG KD++ NI AT E V+ ++SEWF+ AANHTCG F E +E L+GL PS +V+PP V ESA MECK+RH++D+ NA G VTAT ++ EVV+FH+ E V EG+P VD+ RY P+CRLGG+TYGRV S +DLPRPDRP+ GR Sbjct: 6 PKDLKSCYPLMISAVVPRPIAFVSSLSADGVGNLSPFSYATVISHDPPCVMFSACRKPGGAKKDTWANIEATKEFVVCVMSEWFVNAANHTCGNFDAEDDEFDLSGLTRVPSAKVKPPRVKESAFHMECKLRHSYDVTNADGVVTATAIVGEVVMFHIHEAVANVEW--EGKPRVDMARYAPVCRLGGDTYGRVGSGYDLPRPDRPAAGR 213
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A6H5L1F6_9PHAE (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE) HSP 1 Score: 259 bits (662), Expect = 1.700e-81 Identity = 124/207 (59.90%), Postives = 156/207 (75.36%), Query Frame = 2 Query: 272 VQLRPQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRP 892 V++ P+DLKS Y+L+IS+VVPRPIA ST+ DG N AP+SYFN + HDPP LAVS CR G KD+ N+ A+GE V++I+S+WF+EAANHTCG+FPPEV+EM +AGL P S V PP + ESAV+MECKVRHT+DI N+ G+VT TVV EVV+FHV +L G GEG+PTV+ PM RLGGNTYGR+ S+FD+ RP Sbjct: 73 VRIDPRDLKSCYSLMISSVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFTHLLKENGAGEGKPTVNHEGLMPMSRLGGNTYGRLGSVFDISRP 279
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A835ZDF3_9STRA (Flavin_Reduct domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF3_9STRA) HSP 1 Score: 239 bits (611), Expect = 4.860e-74 Identity = 117/209 (55.98%), Postives = 154/209 (73.68%), Query Frame = 2 Query: 272 VQLRPQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDR 898 V L P L S Y LVIS+ VPRPIAF+S++D++G NLAP+SYFN ++HDPP++A+ CRK G KDS NI A GE V++I+S+WFIE+ANH CG F +V+EM L+GL ++ V PP VAESA++MECK+ H +++KNAAG T TVVI +VV+FHV+E VL G +PTV + +P+ RLGGNTYG V ++FDLPRPDR Sbjct: 58 VALDPAALASCYGLVISSGVPRPIAFVSSLDSEGRRNLAPFSYFNFVAHDPPLVAIGICRKRGEK-KDSLANIEARGEFVVSIMSDWFIESANHCCGDFSSDVDEMALSGLTAARAKIVEPPLVAESAINMECKLVHKYEVKNAAGTDTTTVVIGQVVMFHVLEAVLDTVTHGPTKPTVHFDKLRPIARLGGNTYGIVNTVFDLPRPDR 265
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: D7G8R2_ECTSI (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI) HSP 1 Score: 238 bits (608), Expect = 5.950e-74 Identity = 114/193 (59.07%), Postives = 141/193 (73.06%), Query Frame = 2 Query: 314 VISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRP 892 V VVPRPIA ST+ DG N AP+SYFN + HDPP LAVS CR G KD+ N+ A+GE V++I+S+WF+EAANHTCG+ PPEV+EM +AGL P S V PP + ESAV+MECKVRHT+DI N+ G+VT TVV EVV+FHV +L G GEG+PTV+ P+ RLGGNTYGR+ S+FD+PRP Sbjct: 45 VAHQVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGLMPISRLGGNTYGRLGSVFDIPRP 237
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A7S4C094_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C094_CHRCT) HSP 1 Score: 238 bits (607), Expect = 2.580e-73 Identity = 115/213 (53.99%), Postives = 148/213 (69.48%), Query Frame = 2 Query: 272 VQLRPQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCR-KPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDRPSG 907 V L P++LKS Y LVIS+ VPRPIAF+ST+ A G GNLAP+SY ++HDPP + V CR + KD+ NI ATGE V+ I+SEWF+EAANH C AF V+E +GL PS V+PP V ESA+ EC +RH H++ NA+G VT+T+V+ EVV+ H V G GEG+PT+D ++QP+ RLGG+TYGR S+FDLPRPDR G Sbjct: 62 VALDPKELKSCYPLVISSYVPRPIAFVSTLSASGEGNLAPFSYSGVVAHDPPTIVVGICRGRNADGKKDTLANIDATGEFVVCIMSEWFVEAANHCCSAFERGVDEFDQSGLTRVPSTRVKPPRVGESAMHYECVLRHRHEVVNASGVVTSTMVVGEVVMMHAASAVCNVDGAGEGKPTIDFAKFQPISRLGGDTYGRTLSMFDLPRPDRKVG 274
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A7S0MRI4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MRI4_9CHLO) HSP 1 Score: 238 bits (607), Expect = 3.120e-73 Identity = 119/205 (58.05%), Postives = 143/205 (69.76%), Query Frame = 2 Query: 299 SAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDRPSGGR 913 S Y LVIS+ VPRPIA +ST+ + G NLAP+SY A+ HDPP++A S CRKPGG+ KD+ NI T E VI+I+SEWF+EAANHTCG FP E +E KL+GL P PS V PP AES V ECKVR HD NAAG+VT T+V+AEVV FH+ E L G+G V +PM RLGG+TY T ++DLPRPDRP GGR Sbjct: 77 SCYPLVISSYVPRPIALVSTISSQGVVNLAPFSYSGAMGHDPPLIAFSVCRKPGGLRKDTLANIEETKECVIHIMSEWFVEAANHTCGNFPSEEDEFKLSGLTPVPSTLVAPPRCAESGVHFECKVRELHDQANAAGKVTTTIVVAEVVCFHIRED-LYDDNNGKGPTQVKPEDLRPMSRLGGDTYSTTTYVYDLPRPDRPKGGR 280
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A087S9P8_AUXPR (Uncharacterized protein YwrF n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087S9P8_AUXPR) HSP 1 Score: 236 bits (603), Expect = 2.320e-72 Identity = 123/202 (60.89%), Postives = 149/202 (73.76%), Query Frame = 2 Query: 305 YALVISAVVPRPIAFISTMDADGN-GNLAPYSYFNALSHDPPMLAVSCCRKP--GGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGG-EGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDR 898 Y LVISA+VPRPIAFIST++A G+ GNLAPYSYFNA++HDPP LA+ C KDS NI TGELV+NIISEWF+EAANH CG F NE +L+GL P PS +V+ P V ESAV MECKV H+++++NAAG V+ TV++A+VVL HV +GV AG G+ VDL +Y P+ RLGGNTYGRV FDLPRPDR Sbjct: 90 YPLVISAIVPRPIAFISTLNAAGSVGNLAPYSYFNAVAHDPPTLAIGFCASSIRDHRRKDSLVNIVETGELVVNIISEWFVEAANHCCGNFDYGQNEFELSGLTPMPSVKVKAPRVRESAVQMECKVVHSYEVRNAAGAVSTTVILAQVVLMHVADGV---AGASPSGKLVVDLAKYAPISRLGGNTYGRVKETFDLPRPDR 288
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: A0A7S0L4A2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4A2_9EUKA) HSP 1 Score: 232 bits (592), Expect = 3.080e-71 Identity = 119/211 (56.40%), Postives = 143/211 (67.77%), Query Frame = 2 Query: 272 VQLRPQDLKSAYALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCR--KPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDR 898 V+L P DLKS Y L+ISA VPRPIAF+ST+ A G GNLAP+SY ++HDPP +AVS CR + KD+ NI TGE V+ I+SEWF+EAANHTCG+F V+E +GL PS V+PP V ESAV ECK+ H+I N AG TATVV EVV +GV G GEG+PT+ Y+ + RLGGNTYGRVTS FDL RPDR Sbjct: 48 VELIPSDLKSCYPLMISAYVPRPIAFVSTVSASGKGNLAPFSYSGCVAHDPPTIAVSICRNGRAADGKKDTLANIDDTGEFVVCIMSEWFVEAANHTCGSFERGVDEFDESGLTRLPSSIVKPPRVGESAVHFECKLSQRHEIINKAGVTTATVVFGEVVKVWAAKGVCDENGAGEGKPTIKFDNYRALARLGGNTYGRVTSTFDLDRPDR 258
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Match: I0YPP5_COCSC (Flavin_Reduct domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPP5_COCSC) HSP 1 Score: 232 bits (591), Expect = 1.220e-70 Identity = 113/213 (53.05%), Postives = 151/213 (70.89%), Query Frame = 2 Query: 272 VQLRPQDLKSA-YALVISAVVPRPIAFISTMDADGNGNLAPYSYFNALSHDPPMLAVSCCR---KPGGVFKDSYRNIAATGELVINIISEWFIEAANHTCGAFPPEVNEMKLAGLAPRPSREVRPPGVAESAVSMECKVRHTHDIKNAAGEVTATVVIAEVVLFHVVEGVLLPAGGGEGRPTVDLTRYQPMCRLGGNTYGRVTSIFDLPRPDR 898 ++L P L + Y VISAVVPRPIAFIS++ +G GNL+PYSYF +SHDPP + + C +P G+ KDS +NI TGE +N++SEWF+EAANHTCG + VNE++LAGL P PS V+PP + E+AV +ECK+RH++ +KN+ GEVTAT++I EVVL HV+E V G G V+ +Y P+ RLGGNTY R+T +DLPRP + Sbjct: 73 IELDPAQLGAGLYPFVISAVVPRPIAFISSLSKEGVGNLSPYSYFGVMSHDPPYVTIGTCATGGRPNGM-KDSQQNILETGEFTLNMMSEWFLEAANHTCGNYDRGVNEIELAGLTPTPSVRVKPPRIEEAAVQLECKLRHSYPVKNSKGEVTATIIIGEVVLVHVLEAVT--GKTGHGHVFVEFDKYAPVSRLGGNTYARITETYDLPRPGK 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1161.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1161.3.1 >prot_P-wetherbeei_contig1161.3.1 ID=prot_P-wetherbeei_contig1161.3.1|Name=mRNA_P-wetherbeei_contig1161.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MDADGNGNLAPYSYFNALSHDPPMLAVSCCRKPGGVFKDSYRNIAATGELback to top mRNA from alignment at P-wetherbeei_contig1161:3761..5429- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1161.3.1 ID=mRNA_P-wetherbeei_contig1161.3.1|Name=mRNA_P-wetherbeei_contig1161.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1669bp|location=Sequence derived from alignment at P-wetherbeei_contig1161:3761..5429- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1161:3761..5429- >mRNA_P-wetherbeei_contig1161.3.1 ID=mRNA_P-wetherbeei_contig1161.3.1|Name=mRNA_P-wetherbeei_contig1161.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig1161:3761..5429- (Phaeothamnion wetherbeei SAG_119_79)back to top |