mRNA_P-wetherbeei_contig11609.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11609.2.1
Unique NamemRNA_P-wetherbeei_contig11609.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A7W1YEJ6_9BACT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A7W1YEJ6_9BACT)

HSP 1 Score: 402 bits (1034), Expect = 1.220e-134
Identity = 200/302 (66.23%), Postives = 242/302 (80.13%), Query Frame = 1
Query:    7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912
            AQ+ +PSRP+++VVTF  GGGPD MARIV  KL  N  +A  VENRAGATGI+GA  VA +  DGYT+++ TPAP++IAGGSGRKL YDPLKDF  VTQGVL TPI+VVAP+ PYKTVADLIA AK KPG + + SAGIGNSQHLAGELF QMA I+TLHVPY      + A+   Q  +FFSDPSALPQ+R+GKLRALAV+T  RS  LPD PTV+E+G+PGYEY+NWYGF+VP+KTPKP++Q L +E+T VL  P+++E+LV AGM PAPS +PEE+D +L KDQEKWA V+KTA I FD
Sbjct:   23 AQEKYPSRPVRVVVTFPPGGGPDAMARIVVAKLAANTGKAFFVENRAGATGIVGAEHVAKSAPDGYTVMVATPAPMTIAGGSGRKLGYDPLKDFASVTQGVLQTPILVVAPDGPYKTVADLIAAAKAKPGVLNFGSAGIGNSQHLAGELFNQMAHINTLHVPYPSTGQGLVAVMTHQIAFFFSDPSALPQIRAGKLRALAVSTTTRSQNLPDVPTVAEAGVPGYEYTNWYGFVVPAKTPKPIIQYLNQEITKVLTDPEIREQLVTAGMNPAPS-TPEELDAYLPKDQEKWAGVIKTAHIKFD 323          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI00164E6A03 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164E6A03)

HSP 1 Score: 381 bits (979), Expect = 4.020e-126
Identity = 189/304 (62.17%), Postives = 238/304 (78.29%), Query Frame = 1
Query:    1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912
            A AQD +P+RP++IVVTF AGGGPDI AR++  K+  NI Q V++ENRAGATGIIGA  VA +  DGYT+++ TPAPL+IA GSGRKL Y  L DF  VTQGVL TP++VVAP+ PYKTVAD+IA AK +PGA+T+ SAGIGNSQHLAGELF QMAGI TLHVP+ G A  + A+   Q D++FSDPSA+P V+ GKLRA AV+TLKRS  LPD PTV+E+G+PGYEYSNWYGF VP+KTP  V+  L +E+   +  P VKE L  AGM+P+PS +P+E+  ++ +DQEKWA+V++TA I F+
Sbjct:   36 AWAQDAYPTRPIRIVVTFPAGGGPDIAARVIGAKMAANIGQGVIIENRAGATGIIGAEHVARSAPDGYTVVVATPAPLTIATGSGRKLNYT-LADFAAVTQGVLQTPLLVVAPDGPYKTVADIIAAAKARPGALTFGSAGIGNSQHLAGELFNQMAGIQTLHVPFPGTAQGLLAVMNRQIDFYFSDPSAMPHVKGGKLRAAAVSTLKRSPNLPDVPTVAEAGVPGYEYSNWYGFCVPAKTPPAVIAYLNREIAKAMADPSVKETLTGAGMDPSPS-TPDELAAYMKRDQEKWAKVIRTANIKFE 337          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI00164D2343 (DUF1028 domain-containing protein n=1 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164D2343)

HSP 1 Score: 328 bits (840), Expect = 9.970e-107
Identity = 161/232 (69.40%), Postives = 188/232 (81.03%), Query Frame = 2
Query:  929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624
            MTF+ILG C RTGKAGFCQATSTPAVGWR +D+VPGRG+VTVQA GD+R+LQ A  L+E G +P  VL +L + D YF++RQ A+LD  G  AV+TG K R WAGEIVG  +V TGNVLVG++V++AM+ A++ S  EELEERLMRAVEAGRDAGGQEEGQTS ALVVY    FP+VNLR DV+AEP+GE+R  FDWFKPLI YY  RTLDP SVVPKKA+LEK GL VNPY
Sbjct:    1 MTFTILGRCARTGKAGFCQATSTPAVGWRCTDIVPGRGLVTVQAHGDYRQLQRAIALVERGLSPPDVLAELAKEDPYFDYRQLAVLDMQGRIAVKTGPKARPWAGEIVGTDHVVTGNVLVGEQVLRAMTHAFMGSSGEELEERLMRAVEAGRDAGGQEEGQTSCALVVYASESFPIVNLRVDVAAEPIGEMRTIFDWFKPLIPYYVARTLDPTSVVPKKAFLEKQGLPVNPY 232          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A7W1YEM2_9BACT (DUF1028 domain-containing protein (Fragment) n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A7W1YEM2_9BACT)

HSP 1 Score: 318 bits (815), Expect = 4.540e-103
Identity = 149/226 (65.93%), Postives = 187/226 (82.74%), Query Frame = 2
Query:  929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLG 1606
            MTF++L HC+ T K GFCQATSTPAVGWR +DVV G G+VTVQA GD+R+LQ+AK+L+EFGH+P KV+KDL E D++F+FRQ AI+D  GN+AV TG++ R WAGEIVG  Y+ TGNVLVGD+V++AMS A+ ++  +ELEERL++AVEAGRDAGGQEEGQTS AL VY +H FP+VNLR DV+ EP+ E+R+  DW+KPLI YY  RTLDP SV PKKA LE++G
Sbjct:    1 MTFTVLAHCRDTQKIGFCQATSTPAVGWRCTDVVLGCGLVTVQAHGDYRQLQLAKRLMEFGHSPAKVMKDLSEDDKHFDFRQIAIMDLNGNSAVNTGSRARPWAGEIVGDNYIVTGNVLVGDRVIRAMSKAFESTAGQELEERLLQAVEAGRDAGGQEEGQTSCALTVYEKHTFPIVNLRVDVALEPISEMRKILDWYKPLIPYYVSRTLDPTSVAPKKATLERMG 226          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A8B6LRE2_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. SRS16 TaxID=282217 RepID=A0A8B6LRE2_9BURK)

HSP 1 Score: 317 bits (813), Expect = 2.710e-101
Identity = 159/302 (52.65%), Postives = 219/302 (72.52%), Query Frame = 1
Query:    7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912
            A D FP+RP++IVV F AG  PD++AR+VA K+  ++K+AV+VE+R GATG+IG  +VA A  DGY +L+GTP+  +IA  SGRKL+++P+KD   V+ GV+++P++V    +P K V  LI++AK KPGA+TYAS G+GNSQHLAGEL KQ AGID LHVP+QGG   M A+ +GQ D  F+DP+ALP ++SGK+RALAV +  RS  LPD PTV+ESGLP + Y +WYGFL  + TP  V+  L +E+ A L   +V  KL   GME APS +P+ +  F+A+D  +W +V+ TA+I F+
Sbjct:   27 AADAFPTRPIRIVVPFPAGSAPDLLARLVANKMAISLKEAVIVEDRVGATGLIGTEIVARASPDGYALLIGTPST-TIAAASGRKLSFNPMKDLAPVSMGVIISPLLVTGAQSPIKDVKGLISMAKAKPGALTYASGGVGNSQHLAGELLKQSAGIDLLHVPFQGGGTIMTALMSGQVDVAFADPAALPLIQSGKIRALAVGSRTRSRMLPDVPTVAESGLPSFSYQSWYGFLTTAGTPANVIDILNREIRAALGDAEVLAKLSELGMEAAPS-TPDALRIFMAEDVSRWEKVITTAQIKFE 326          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A8I1R9H1_9BURK (DUF1028 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A8I1R9H1_9BURK)

HSP 1 Score: 305 bits (782), Expect = 5.490e-98
Identity = 151/232 (65.09%), Postives = 183/232 (78.88%), Query Frame = 2
Query:  929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624
            MTF+ILG C +TGKAGF Q+TSTPAVGWR SDVV  RGIVTVQA  D+R+LQ AK+L+E GH+P +VL DL  GD Y E+RQ A+LD  G +AV TG K R+WAGE+VG  +VATGNVLVG+ VV++MS+ + A   E LE+RLM  +EAGRDAGGQ +GQTSAA+VVY RHEFP+VNLR D + EPVGELRR +DWF+PLI YY +RTLDP SV P +  L +LGL+ NPY
Sbjct:    1 MTFTILGFCPKTGKAGFAQSTSTPAVGWRCSDVVLHRGIVTVQAHADYRQLQRAKRLMESGHSPSRVLDDLRGGDPYIEYRQIAVLDLEGRSAVYTGPKARAWAGEVVGDDHVATGNVLVGETVVRSMSECFAARGGEALEDRLMAVLEAGRDAGGQPDGQTSAAVVVYERHEFPIVNLRVDAALEPVGELRRIYDWFRPLIPYYVQRTLDPGSVPPMRTVLAELGLRQNPY 232          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI0019B1C813 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B1C813)

HSP 1 Score: 307 bits (787), Expect = 2.300e-97
Identity = 161/302 (53.31%), Postives = 205/302 (67.88%), Query Frame = 1
Query:    7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912
            A  PFPS+P+K+VV +  GGG D MARI+  K    + Q VV+ENRAGA G IG   VA + ADGYT+++G+P P+SIA     KL Y P  D   V +   ++ I+VV+P  P   V++LIALA+ +PG +T+ S+G+G++ HL GELFK +A +D LHVPY+G A A+  I  GQT   F+DPSALP VRSGKLRAL  TTLKRS+ + D PT++ESGLPGY   NWYGF VP+ TP PV+ RL  EL   L  P+VK KL  AG +PAPS +PEEM   L  D  +WARVV+ AKI  D
Sbjct:   28 AAQPFPSKPVKVVVPWTPGGGVDTMARIIQGKFAEGLGQPVVMENRAGAAGTIGTEYVARSAADGYTLIVGSPGPMSIAAVLSPKLPYKPASDLAPVARTATISNILVVSPTLPANNVSELIALARAQPGKLTFGSSGMGSALHLTGELFKLLAKVDMLHVPYKGTAPALADIMGGQTQLMFADPSALPLVRSGKLRALGQTTLKRSSSMSDIPTIAESGLPGYVADNWYGFFVPAGTPSPVIARLNAELVKALNDPEVKAKLNAAGQDPAPS-TPEEMGAVLRADIAQWARVVEAAKIKLD 328          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A431TJE4_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax gossypii TaxID=1679495 RepID=A0A431TJE4_9BURK)

HSP 1 Score: 303 bits (775), Expect = 1.230e-95
Identity = 148/304 (48.68%), Postives = 212/304 (69.74%), Query Frame = 1
Query:    1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912
            A AQD FPS+P++I+V F  G  PD+ AR+VA ++TT + + ++VENR GATGIIG  +VAHAPADGYT+L+ +P+  +I   S RKL+++P KD   V+ G  + P++V    +P K VA LI +AK +PG +  AS G+GNSQHLA E+ KQMAGI+ LHVP+QG  + +P++  G+ D  F+D SALP +++GK+RA+AV +  RS  LPD PTV+ESGLPG+ Y +W+G +  + TP PV   L + L   L+ P+V+ KL  AG+E AP  +PE M  F+  D ++W++V++TA I FD
Sbjct:   22 AYAQDAFPSKPIRIIVPFVPGSAPDVFARVVADRMTTVVGKPLIVENRPGATGIIGTEIVAHAPADGYTLLVASPST-TILAASNRKLSFNPTKDLQPVSMGAYMVPVLVTGAGSPIKDVATLIEMAKARPGKLVIASGGVGNSQHLAAEMLKQMAGIELLHVPFQGTPLIVPSLIRGEVDLTFADASALPLIKAGKIRAIAVGSPARSKALPDVPTVAESGLPGFSYQSWFGIMAAAPTPAPVAAFLNRALNQTLRDPEVQAKLFTAGLEAAPG-TPEAMSAFITDDIKRWSKVIQTANIKFD 323          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A315DRL1_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans sp. 2KL-51 TaxID=1977911 RepID=A0A315DRL1_9BURK)

HSP 1 Score: 296 bits (759), Expect = 2.700e-94
Identity = 147/235 (62.55%), Postives = 182/235 (77.45%), Query Frame = 2
Query:  920 GPHMTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624
            G  MTF+I+GHC+RTGK GFCQATS+ AVG R +DVVPGR + +VQA GD R+   A++L+E GH+P + L+ L + D YF+ RQ AILD  GN AV TG++ R WAGEIVG  +++TGNVLV   VV AM+ A+ +SE +ELEERL+RAVEAGRDAGGQEEGQTS AL+VY +H FP+VNLR DV+ EP+ E+R+  DWFKPLI YY +RTLDP SV PKKA LEK G  +NPY
Sbjct:   14 GHGMTFTIIGHCRRTGKLGFCQATSSVAVGGRCADVVPGRAVFSVQATGDSRQKDEARQLLEAGHSPVQALEALRKSDPYFQNRQIAILDINGNVAVNTGDRARPWAGEIVGNNHISTGNVLVNKGVVLAMTKAFESSEDQELEERLLRAVEAGRDAGGQEEGQTSCALLVYEQHTFPIVNLRVDVALEPIAEMRKILDWFKPLIPYYVRRTLDPTSVEPKKAVLEKWGYPLNPY 248          
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI001C47492B (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bordetella sp. BOR01 TaxID=2854779 RepID=UPI001C47492B)

HSP 1 Score: 290 bits (742), Expect = 1.300e-90
Identity = 149/298 (50.00%), Postives = 207/298 (69.46%), Query Frame = 1
Query:    1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSD-PSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVK 891
            A A + +PSRP++++V FA GGG D++ARIV QKL  N+KQ V++ENR+GA G +G  +VA A  DGYT++LG   P+SI       L YDP+KD   +TQ V++T ++V+ P     +VA+LI LAK+KPG +++AS G G + HLAGELFK MAG+D  HVPY+G   A+  +  GQ   FF + PSALPQ RSG+L+AL VTT +RS+  PD PT++ESGLPG+E +NWYGFL  + TPKP++ +L +E+  VL  PDVKE+LV  G E   + +PEE    + ++  KW +VV+
Sbjct:   26 ATATEDYPSRPIRLIVPFAPGGGADVLARIVGQKLGENLKQPVLIENRSGAGGNLGTDLVAKAEPDGYTLVLGVVGPISINVSLFDSLPYDPVKDLAPITQAVMVTNLLVINPGLKVDSVAELIELAKSKPGTLSFASGGTGTAGHLAGELFKTMAGVDITHVPYRGSGPAINDLIGGQVQLFFDNMPSALPQARSGRLKALGVTTARRSSAAPDIPTIAESGLPGFEANNWYGFLTAAGTPKPIIDKLNREIVRVLNMPDVKERLVAMGAEVIGN-TPEEFALVIREEIPKWRQVVQ 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W1YEJ6_9BACT1.220e-13466.23Tripartite tricarboxylate transporter substrate bi... [more]
UPI00164E6A034.020e-12662.17tripartite tricarboxylate transporter substrate bi... [more]
UPI00164D23439.970e-10769.40DUF1028 domain-containing protein n=1 Tax=Ramlibac... [more]
A0A7W1YEM2_9BACT4.540e-10365.93DUF1028 domain-containing protein (Fragment) n=1 T... [more]
A0A8B6LRE2_9BURK2.710e-10152.65Argininosuccinate lyase n=1 Tax=Variovorax sp. SRS... [more]
A0A8I1R9H1_9BURK5.490e-9865.09DUF1028 domain-containing protein n=1 Tax=Burkhold... [more]
UPI0019B1C8132.300e-9753.31Tripartite tricarboxylate transporter substrate bi... [more]
A0A431TJE4_9BURK1.230e-9548.68Tripartite tricarboxylate transporter substrate bi... [more]
A0A315DRL1_9BURK2.700e-9462.55Uncharacterized protein n=2 Tax=Limnohabitans sp. ... [more]
UPI001C47492B1.300e-9050.00tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11609contigP-wetherbeei_contig11609:482..2105 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1366050.N234_31520
PFAMsTctC
Model size1624
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.48e-78
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,1K6UF@119060|Burkholderiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size837
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185918.7639987-UTR-P-wetherbeei_contig11609:481..11901683185918.7639987-UTR-P-wetherbeei_contig11609:481..1190Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11609 482..1190 -
1683185918.7844713-UTR-P-wetherbeei_contig11609:2027..21051683185918.7844713-UTR-P-wetherbeei_contig11609:2027..2105Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11609 2028..2105 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185918.7752237-CDS-P-wetherbeei_contig11609:1190..20271683185918.7752237-CDS-P-wetherbeei_contig11609:1190..2027Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11609 1191..2027 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11609.2.1prot_P-wetherbeei_contig11609.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11609 1191..2027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11609.2.1

>prot_P-wetherbeei_contig11609.2.1 ID=prot_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp
MARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPA
PLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIAL
AKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIA
AGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGY
EYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSA
SPEEMDGFLAKDQEKWARVVKTAKITFD*
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mRNA from alignment at P-wetherbeei_contig11609:482..2105-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11609.2.1 ID=mRNA_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig11609:482..2105- (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCGCCCAGGATCCCTTCCCGTCCCGCCCGCTCAAGATCGTCGTGAC CTTCGCCGCAGGCGGCGGTCCGGACATCATGGCGCGCATCGTCGCGCAGA AGCTGACCACGAACATCAAGCAGGCGGTGGTCGTCGAGAACCGCGCCGGC GCGACCGGCATCATTGGCGCCACCGTCGTTGCCCACGCACCTGCGGACGG CTACACGATCCTGCTGGGCACGCCTGCGCCGCTGTCGATCGCCGGCGGCT CCGGGCGCAAGCTCACCTACGACCCCCTCAAGGATTTCGTGTGGGTGACG CAGGGCGTGCTGCTGACGCCCATCATGGTCGTCGCCCCGAATGCCCCTTA CAAGACCGTTGCCGACCTGATCGCCCTGGCGAAGACCAAGCCCGGCGCCA TGACCTACGCTTCGGCCGGCATCGGCAATTCCCAGCACCTCGCGGGTGAA CTGTTCAAGCAGATGGCGGGCATCGACACGCTGCACGTCCCCTACCAGGG CGGCGCCATGGCGATGCCGGCCATCGCGGCCGGCCAGACGGACTACTTCT TCTCGGACCCGTCGGCGCTGCCGCAGGTGCGTTCGGGCAAGCTGCGCGCG CTCGCCGTCACGACACTGAAGCGCTCGGCCCAGTTGCCGGATACGCCTAC CGTCTCGGAATCGGGCCTGCCCGGCTACGAGTACTCGAACTGGTATGGGT TCCTGGTCCCCTCGAAGACGCCGAAGCCCGTCGTGCAGCGCCTCTTCAAG GAACTGACCGCAGTGCTGCAGGCGCCCGACGTGAAGGAAAAGCTCGTCAA CGCGGGCATGGAGCCCGCGCCCTCGGCCTCGCCCGAGGAAATGGACGGGT TCCTCGCGAAGGACCAGGAGAAGTGGGCCCGCGTCGTGAAGACCGCCAAG ATCACCTTCGACTGAACCGGGCCCGCACATGACCTTCTCCATCCTCGGCC ACTGCAAGCGCACCGGCAAGGCCGGCTTCTGCCAGGCCACCAGCACCCCT GCCGTGGGCTGGCGCATCTCCGACGTCGTGCCCGGGCGCGGCATCGTCAC CGTGCAGGCGATGGGCGACTTTCGCCGCCTGCAGGTGGCGAAGAAGCTCA TCGAGTTCGGCCACACGCCCGACAAGGTCCTCAAGGACCTGTGCGAAGGC GACCGGTACTTTGAATTCCGTCAGTTCGCGATCCTCGACTTCTACGGCAA CGCGGCAGTGCGCACCGGGAACAAGACGCGTTCGTGGGCCGGCGAGATCG TCGGTCCCGGTTACGTCGCCACCGGCAACGTGCTGGTCGGCGACAAGGTA GTCAAGGCGATGTCGGATGCGTACCTTGCCAGCGAATCGGAGGAACTCGA GGAACGCCTCATGCGCGCCGTCGAGGCCGGGCGCGACGCGGGCGGCCAGG AGGAAGGCCAGACCTCCGCCGCACTCGTGGTCTACGGCCGTCACGAATTC CCGCTCGTCAACCTGCGCGCCGACGTGAGCGCCGAGCCCGTTGGCGAACT GCGCCGCAACTTCGACTGGTTCAAGCCGCTGATCGACTACTACGAGAAGC GCACACTCGACCCCGAATCGGTCGTCCCGAAGAAAGCCTACCTCGAGAAG CTCGGTCTCAAGGTCAACCCCTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11609:482..2105-

>mRNA_P-wetherbeei_contig11609.2.1 ID=mRNA_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig11609:482..2105- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCGCATCGTCGCGCAGAAGCTGACCACGAACATCAAGCAGGCGGT
GGTCGTCGAGAACCGCGCCGGCGCGACCGGCATCATTGGCGCCACCGTCG
TTGCCCACGCACCTGCGGACGGCTACACGATCCTGCTGGGCACGCCTGCG
CCGCTGTCGATCGCCGGCGGCTCCGGGCGCAAGCTCACCTACGACCCCCT
CAAGGATTTCGTGTGGGTGACGCAGGGCGTGCTGCTGACGCCCATCATGG
TCGTCGCCCCGAATGCCCCTTACAAGACCGTTGCCGACCTGATCGCCCTG
GCGAAGACCAAGCCCGGCGCCATGACCTACGCTTCGGCCGGCATCGGCAA
TTCCCAGCACCTCGCGGGTGAACTGTTCAAGCAGATGGCGGGCATCGACA
CGCTGCACGTCCCCTACCAGGGCGGCGCCATGGCGATGCCGGCCATCGCG
GCCGGCCAGACGGACTACTTCTTCTCGGACCCGTCGGCGCTGCCGCAGGT
GCGTTCGGGCAAGCTGCGCGCGCTCGCCGTCACGACACTGAAGCGCTCGG
CCCAGTTGCCGGATACGCCTACCGTCTCGGAATCGGGCCTGCCCGGCTAC
GAGTACTCGAACTGGTATGGGTTCCTGGTCCCCTCGAAGACGCCGAAGCC
CGTCGTGCAGCGCCTCTTCAAGGAACTGACCGCAGTGCTGCAGGCGCCCG
ACGTGAAGGAAAAGCTCGTCAACGCGGGCATGGAGCCCGCGCCCTCGGCC
TCGCCCGAGGAAATGGACGGGTTCCTCGCGAAGGACCAGGAGAAGTGGGC
CCGCGTCGTGAAGACCGCCAAGATCACCTTCGACTGA
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