mRNA_P-wetherbeei_contig11609.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A7W1YEJ6_9BACT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A7W1YEJ6_9BACT) HSP 1 Score: 402 bits (1034), Expect = 1.220e-134 Identity = 200/302 (66.23%), Postives = 242/302 (80.13%), Query Frame = 1 Query: 7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912 AQ+ +PSRP+++VVTF GGGPD MARIV KL N +A VENRAGATGI+GA VA + DGYT+++ TPAP++IAGGSGRKL YDPLKDF VTQGVL TPI+VVAP+ PYKTVADLIA AK KPG + + SAGIGNSQHLAGELF QMA I+TLHVPY + A+ Q +FFSDPSALPQ+R+GKLRALAV+T RS LPD PTV+E+G+PGYEY+NWYGF+VP+KTPKP++Q L +E+T VL P+++E+LV AGM PAPS +PEE+D +L KDQEKWA V+KTA I FD Sbjct: 23 AQEKYPSRPVRVVVTFPPGGGPDAMARIVVAKLAANTGKAFFVENRAGATGIVGAEHVAKSAPDGYTVMVATPAPMTIAGGSGRKLGYDPLKDFASVTQGVLQTPILVVAPDGPYKTVADLIAAAKAKPGVLNFGSAGIGNSQHLAGELFNQMAHINTLHVPYPSTGQGLVAVMTHQIAFFFSDPSALPQIRAGKLRALAVSTTTRSQNLPDVPTVAEAGVPGYEYTNWYGFVVPAKTPKPIIQYLNQEITKVLTDPEIREQLVTAGMNPAPS-TPEELDAYLPKDQEKWAGVIKTAHIKFD 323
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI00164E6A03 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164E6A03) HSP 1 Score: 381 bits (979), Expect = 4.020e-126 Identity = 189/304 (62.17%), Postives = 238/304 (78.29%), Query Frame = 1 Query: 1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912 A AQD +P+RP++IVVTF AGGGPDI AR++ K+ NI Q V++ENRAGATGIIGA VA + DGYT+++ TPAPL+IA GSGRKL Y L DF VTQGVL TP++VVAP+ PYKTVAD+IA AK +PGA+T+ SAGIGNSQHLAGELF QMAGI TLHVP+ G A + A+ Q D++FSDPSA+P V+ GKLRA AV+TLKRS LPD PTV+E+G+PGYEYSNWYGF VP+KTP V+ L +E+ + P VKE L AGM+P+PS +P+E+ ++ +DQEKWA+V++TA I F+ Sbjct: 36 AWAQDAYPTRPIRIVVTFPAGGGPDIAARVIGAKMAANIGQGVIIENRAGATGIIGAEHVARSAPDGYTVVVATPAPLTIATGSGRKLNYT-LADFAAVTQGVLQTPLLVVAPDGPYKTVADIIAAAKARPGALTFGSAGIGNSQHLAGELFNQMAGIQTLHVPFPGTAQGLLAVMNRQIDFYFSDPSAMPHVKGGKLRAAAVSTLKRSPNLPDVPTVAEAGVPGYEYSNWYGFCVPAKTPPAVIAYLNREIAKAMADPSVKETLTGAGMDPSPS-TPDELAAYMKRDQEKWAKVIRTANIKFE 337
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI00164D2343 (DUF1028 domain-containing protein n=1 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164D2343) HSP 1 Score: 328 bits (840), Expect = 9.970e-107 Identity = 161/232 (69.40%), Postives = 188/232 (81.03%), Query Frame = 2 Query: 929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624 MTF+ILG C RTGKAGFCQATSTPAVGWR +D+VPGRG+VTVQA GD+R+LQ A L+E G +P VL +L + D YF++RQ A+LD G AV+TG K R WAGEIVG +V TGNVLVG++V++AM+ A++ S EELEERLMRAVEAGRDAGGQEEGQTS ALVVY FP+VNLR DV+AEP+GE+R FDWFKPLI YY RTLDP SVVPKKA+LEK GL VNPY Sbjct: 1 MTFTILGRCARTGKAGFCQATSTPAVGWRCTDIVPGRGLVTVQAHGDYRQLQRAIALVERGLSPPDVLAELAKEDPYFDYRQLAVLDMQGRIAVKTGPKARPWAGEIVGTDHVVTGNVLVGEQVLRAMTHAFMGSSGEELEERLMRAVEAGRDAGGQEEGQTSCALVVYASESFPIVNLRVDVAAEPIGEMRTIFDWFKPLIPYYVARTLDPTSVVPKKAFLEKQGLPVNPY 232
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A7W1YEM2_9BACT (DUF1028 domain-containing protein (Fragment) n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A7W1YEM2_9BACT) HSP 1 Score: 318 bits (815), Expect = 4.540e-103 Identity = 149/226 (65.93%), Postives = 187/226 (82.74%), Query Frame = 2 Query: 929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLG 1606 MTF++L HC+ T K GFCQATSTPAVGWR +DVV G G+VTVQA GD+R+LQ+AK+L+EFGH+P KV+KDL E D++F+FRQ AI+D GN+AV TG++ R WAGEIVG Y+ TGNVLVGD+V++AMS A+ ++ +ELEERL++AVEAGRDAGGQEEGQTS AL VY +H FP+VNLR DV+ EP+ E+R+ DW+KPLI YY RTLDP SV PKKA LE++G Sbjct: 1 MTFTVLAHCRDTQKIGFCQATSTPAVGWRCTDVVLGCGLVTVQAHGDYRQLQLAKRLMEFGHSPAKVMKDLSEDDKHFDFRQIAIMDLNGNSAVNTGSRARPWAGEIVGDNYIVTGNVLVGDRVIRAMSKAFESTAGQELEERLLQAVEAGRDAGGQEEGQTSCALTVYEKHTFPIVNLRVDVALEPISEMRKILDWYKPLIPYYVSRTLDPTSVAPKKATLERMG 226
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A8B6LRE2_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. SRS16 TaxID=282217 RepID=A0A8B6LRE2_9BURK) HSP 1 Score: 317 bits (813), Expect = 2.710e-101 Identity = 159/302 (52.65%), Postives = 219/302 (72.52%), Query Frame = 1 Query: 7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912 A D FP+RP++IVV F AG PD++AR+VA K+ ++K+AV+VE+R GATG+IG +VA A DGY +L+GTP+ +IA SGRKL+++P+KD V+ GV+++P++V +P K V LI++AK KPGA+TYAS G+GNSQHLAGEL KQ AGID LHVP+QGG M A+ +GQ D F+DP+ALP ++SGK+RALAV + RS LPD PTV+ESGLP + Y +WYGFL + TP V+ L +E+ A L +V KL GME APS +P+ + F+A+D +W +V+ TA+I F+ Sbjct: 27 AADAFPTRPIRIVVPFPAGSAPDLLARLVANKMAISLKEAVIVEDRVGATGLIGTEIVARASPDGYALLIGTPST-TIAAASGRKLSFNPMKDLAPVSMGVIISPLLVTGAQSPIKDVKGLISMAKAKPGALTYASGGVGNSQHLAGELLKQSAGIDLLHVPFQGGGTIMTALMSGQVDVAFADPAALPLIQSGKIRALAVGSRTRSRMLPDVPTVAESGLPSFSYQSWYGFLTTAGTPANVIDILNREIRAALGDAEVLAKLSELGMEAAPS-TPDALRIFMAEDVSRWEKVITTAQIKFE 326
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A8I1R9H1_9BURK (DUF1028 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A8I1R9H1_9BURK) HSP 1 Score: 305 bits (782), Expect = 5.490e-98 Identity = 151/232 (65.09%), Postives = 183/232 (78.88%), Query Frame = 2 Query: 929 MTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624 MTF+ILG C +TGKAGF Q+TSTPAVGWR SDVV RGIVTVQA D+R+LQ AK+L+E GH+P +VL DL GD Y E+RQ A+LD G +AV TG K R+WAGE+VG +VATGNVLVG+ VV++MS+ + A E LE+RLM +EAGRDAGGQ +GQTSAA+VVY RHEFP+VNLR D + EPVGELRR +DWF+PLI YY +RTLDP SV P + L +LGL+ NPY Sbjct: 1 MTFTILGFCPKTGKAGFAQSTSTPAVGWRCSDVVLHRGIVTVQAHADYRQLQRAKRLMESGHSPSRVLDDLRGGDPYIEYRQIAVLDLEGRSAVYTGPKARAWAGEVVGDDHVATGNVLVGETVVRSMSECFAARGGEALEDRLMAVLEAGRDAGGQPDGQTSAAVVVYERHEFPIVNLRVDAALEPVGELRRIYDWFRPLIPYYVQRTLDPGSVPPMRTVLAELGLRQNPY 232
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI0019B1C813 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B1C813) HSP 1 Score: 307 bits (787), Expect = 2.300e-97 Identity = 161/302 (53.31%), Postives = 205/302 (67.88%), Query Frame = 1 Query: 7 AQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912 A PFPS+P+K+VV + GGG D MARI+ K + Q VV+ENRAGA G IG VA + ADGYT+++G+P P+SIA KL Y P D V + ++ I+VV+P P V++LIALA+ +PG +T+ S+G+G++ HL GELFK +A +D LHVPY+G A A+ I GQT F+DPSALP VRSGKLRAL TTLKRS+ + D PT++ESGLPGY NWYGF VP+ TP PV+ RL EL L P+VK KL AG +PAPS +PEEM L D +WARVV+ AKI D Sbjct: 28 AAQPFPSKPVKVVVPWTPGGGVDTMARIIQGKFAEGLGQPVVMENRAGAAGTIGTEYVARSAADGYTLIVGSPGPMSIAAVLSPKLPYKPASDLAPVARTATISNILVVSPTLPANNVSELIALARAQPGKLTFGSSGMGSALHLTGELFKLLAKVDMLHVPYKGTAPALADIMGGQTQLMFADPSALPLVRSGKLRALGQTTLKRSSSMSDIPTIAESGLPGYVADNWYGFFVPAGTPSPVIARLNAELVKALNDPEVKAKLNAAGQDPAPS-TPEEMGAVLRADIAQWARVVEAAKIKLD 328
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A431TJE4_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax gossypii TaxID=1679495 RepID=A0A431TJE4_9BURK) HSP 1 Score: 303 bits (775), Expect = 1.230e-95 Identity = 148/304 (48.68%), Postives = 212/304 (69.74%), Query Frame = 1 Query: 1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSDPSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVKTAKITFD 912 A AQD FPS+P++I+V F G PD+ AR+VA ++TT + + ++VENR GATGIIG +VAHAPADGYT+L+ +P+ +I S RKL+++P KD V+ G + P++V +P K VA LI +AK +PG + AS G+GNSQHLA E+ KQMAGI+ LHVP+QG + +P++ G+ D F+D SALP +++GK+RA+AV + RS LPD PTV+ESGLPG+ Y +W+G + + TP PV L + L L+ P+V+ KL AG+E AP +PE M F+ D ++W++V++TA I FD Sbjct: 22 AYAQDAFPSKPIRIIVPFVPGSAPDVFARVVADRMTTVVGKPLIVENRPGATGIIGTEIVAHAPADGYTLLVASPST-TILAASNRKLSFNPTKDLQPVSMGAYMVPVLVTGAGSPIKDVATLIEMAKARPGKLVIASGGVGNSQHLAAEMLKQMAGIELLHVPFQGTPLIVPSLIRGEVDLTFADASALPLIKAGKIRAIAVGSPARSKALPDVPTVAESGLPGFSYQSWFGIMAAAPTPAPVAAFLNRALNQTLRDPEVQAKLFTAGLEAAPG-TPEAMSAFITDDIKRWSKVIQTANIKFD 323
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: A0A315DRL1_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans sp. 2KL-51 TaxID=1977911 RepID=A0A315DRL1_9BURK) HSP 1 Score: 296 bits (759), Expect = 2.700e-94 Identity = 147/235 (62.55%), Postives = 182/235 (77.45%), Query Frame = 2 Query: 920 GPHMTFSILGHCKRTGKAGFCQATSTPAVGWRISDVVPGRGIVTVQAMGDFRRLQVAKKLIEFGHTPDKVLKDLCEGDRYFEFRQFAILDFYGNAAVRTGNKTRSWAGEIVGPGYVATGNVLVGDKVVKAMSDAYLASESEELEERLMRAVEAGRDAGGQEEGQTSAALVVYGRHEFPLVNLRADVSAEPVGELRRNFDWFKPLIDYYEKRTLDPESVVPKKAYLEKLGLKVNPY 1624 G MTF+I+GHC+RTGK GFCQATS+ AVG R +DVVPGR + +VQA GD R+ A++L+E GH+P + L+ L + D YF+ RQ AILD GN AV TG++ R WAGEIVG +++TGNVLV VV AM+ A+ +SE +ELEERL+RAVEAGRDAGGQEEGQTS AL+VY +H FP+VNLR DV+ EP+ E+R+ DWFKPLI YY +RTLDP SV PKKA LEK G +NPY Sbjct: 14 GHGMTFTIIGHCRRTGKLGFCQATSSVAVGGRCADVVPGRAVFSVQATGDSRQKDEARQLLEAGHSPVQALEALRKSDPYFQNRQIAILDINGNVAVNTGDRARPWAGEIVGNNHISTGNVLVNKGVVLAMTKAFESSEDQELEERLLRAVEAGRDAGGQEEGQTSCALLVYEQHTFPIVNLRVDVALEPIAEMRKILDWFKPLIPYYVRRTLDPTSVEPKKAVLEKWGYPLNPY 248
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Match: UPI001C47492B (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bordetella sp. BOR01 TaxID=2854779 RepID=UPI001C47492B) HSP 1 Score: 290 bits (742), Expect = 1.300e-90 Identity = 149/298 (50.00%), Postives = 207/298 (69.46%), Query Frame = 1 Query: 1 AGAQDPFPSRPLKIVVTFAAGGGPDIMARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAPLSIAGGSGRKLTYDPLKDFVWVTQGVLLTPIMVVAPNAPYKTVADLIALAKTKPGAMTYASAGIGNSQHLAGELFKQMAGIDTLHVPYQGGAMAMPAIAAGQTDYFFSD-PSALPQVRSGKLRALAVTTLKRSAQLPDTPTVSESGLPGYEYSNWYGFLVPSKTPKPVVQRLFKELTAVLQAPDVKEKLVNAGMEPAPSASPEEMDGFLAKDQEKWARVVK 891 A A + +PSRP++++V FA GGG D++ARIV QKL N+KQ V++ENR+GA G +G +VA A DGYT++LG P+SI L YDP+KD +TQ V++T ++V+ P +VA+LI LAK+KPG +++AS G G + HLAGELFK MAG+D HVPY+G A+ + GQ FF + PSALPQ RSG+L+AL VTT +RS+ PD PT++ESGLPG+E +NWYGFL + TPKP++ +L +E+ VL PDVKE+LV G E + +PEE + ++ KW +VV+ Sbjct: 26 ATATEDYPSRPIRLIVPFAPGGGADVLARIVGQKLGENLKQPVLIENRSGAGGNLGTDLVAKAEPDGYTLVLGVVGPISINVSLFDSLPYDPVKDLAPITQAVMVTNLLVINPGLKVDSVAELIELAKSKPGTLSFASGGTGTAGHLAGELFKTMAGVDITHVPYRGSGPAINDLIGGQVQLFFDNMPSALPQARSGRLKALGVTTARRSSAAPDIPTIAESGLPGFEANNWYGFLTAAGTPKPIIDKLNREIVRVLNMPDVKERLVAMGAEVIGN-TPEEFALVIREEIPKWRQVVQ 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11609.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11609.2.1 >prot_P-wetherbeei_contig11609.2.1 ID=prot_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp MARIVAQKLTTNIKQAVVVENRAGATGIIGATVVAHAPADGYTILLGTPAback to top mRNA from alignment at P-wetherbeei_contig11609:482..2105- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11609.2.1 ID=mRNA_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig11609:482..2105- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11609:482..2105- >mRNA_P-wetherbeei_contig11609.2.1 ID=mRNA_P-wetherbeei_contig11609.2.1|Name=mRNA_P-wetherbeei_contig11609.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig11609:482..2105- (Phaeothamnion wetherbeei SAG_119_79)back to top |