mRNA_P-wetherbeei_contig11603.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11603.1.1
Unique NamemRNA_P-wetherbeei_contig11603.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A7X8XLG1_9BURK (SDR family oxidoreductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XLG1_9BURK)

HSP 1 Score: 329 bits (844), Expect = 9.320e-112
Identity = 156/235 (66.38%), Postives = 193/235 (82.13%), Query Frame = 1
Query:   13 PVAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTGNHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETVR 717
            PVA++TDWRG AGPAIC  LA+AGF+L INGPE+EIF LQS D   +ILALPFD  DE +V     AGLE+ GRLDVLVNN +AWNDA L +IT  MWDEV ++ ++ TF   R+AA +MQAQE+GKII VT+TS  TG H Q+AAS AAVHS+TR+LARELAP+VRVNT+A G++DEPW+DEGG +LRE+LT+ IPLKRLCR+ D+A+AV+YLA G DF+TGQ++VLDGGET+R
Sbjct:    6 PVALVTDWRGTAGPAICFALAQAGFALLINGPEDEIFALQSVDTPARILALPFDVVDEQAVVGALGAGLEIMGRLDVLVNNIFAWNDAALPEITDEMWDEVLKIGLKGTFYCSRAAARVMQAQEYGKIIQVTSTSALTGMHTQYAASCAAVHSLTRSLARELAPHVRVNTIATGLMDEPWVDEGGPELREVLTRDIPLKRLCRSEDVAEAVSYLAAGGDFLTGQMLVLDGGETMR 240          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A7Z9PQR9_9BACT (SDR family oxidoreductase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PQR9_9BACT)

HSP 1 Score: 266 bits (681), Expect = 7.510e-87
Identity = 130/237 (54.85%), Postives = 169/237 (71.31%), Query Frame = 1
Query:    7 DFPVAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTGNHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETVR 717
            DFPVA I+DW GLAG  I   LA   F L INGPE+EIFELQS D  GKILA PFD + E++V+    A L++FG +DVLVNN + W+DA   ++T   + E +  NV  +F  CR++A +M A  +GKIINVT+TS FTG H   AAS AA+HSMT ++A ELAP+VR NT+A G+L+E W+ E G +L+  L   IPLKRLC+  D+A+ V  LATGADFMTGQ++VLDGGE+++
Sbjct:   12 DFPVAFISDWNGLAGREIAHALAGCEFQLIINGPEDEIFELQSHDYPGKILAFPFDYSSEEAVEMTLSATLDIFGHVDVLVNNIHHWSDAKFLELTDKEFKEAYDHNVLGSFHVCRASARLMDALGYGKIINVTSTSAFTGAHTPLAASCAALHSMTVSMANELAPHVRCNTIACGLLEEDWVVEAGEELKNSLVAGIPLKRLCQPADVAELVALLATGADFMTGQMLVLDGGESIK 248          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A5C6EE32_9BACT (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Rubripirellula tenax TaxID=2528015 RepID=A0A5C6EE32_9BACT)

HSP 1 Score: 148 bits (373), Expect = 2.430e-40
Identity = 86/244 (35.25%), Postives = 138/244 (56.56%), Query Frame = 1
Query:   13 PVAVITDWRGLAGPAICMQLARAGFSLFIN----GPEEEIFELQSQDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAP---LSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLR-EMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            PVA++T      G A  +Q AR GF + +N      + E    +++ +    +A+  D +D+ +V+ +  A    FGRLD LVNN    N  P   L  +T  MWD +  VN++  F   R+AA +++A + G ++NV++ + FTG  + + + AS A +++MT++LAR +AP VRVN V  G +D  WI +G  D   + +  + PL R  +  DIADAV + A  A   TGQ++ +DGG+T+
Sbjct:    7 PVALVTGGGTGVGRACVLQFARRGFDVIVNYSRSSTDAESTAREAESLGATAIAMACDVSDDTAVRTMIAAIESQFGRLDALVNNAAMTNFVPHEQLDALTEPMWDRMLAVNLKGPFFVTRAAADLLRAGDGGSVVNVSSVAAFTGQGSSIGYCASKAGLNTMTKSLARAMAPQVRVNAVCPGPIDSRWIRDGNPDWDLDSMVANYPLPRPSQPDDIADAVLFFAVDAKMATGQILSVDGGQTL 250          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A5C5WG97_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL n=1 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WG97_9BACT)

HSP 1 Score: 147 bits (370), Expect = 6.830e-40
Identity = 93/245 (37.96%), Postives = 137/245 (55.92%), Query Frame = 1
Query:   13 PVAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQDVDGK----ILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDI---TSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEG--GGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            PVA++T      G A  +QLA+ GF +F+N    E   LQ+    G     I  +  D + +  V+ +     +  GRLDV+VNN    +  P SD+   T A WD V  VN++ TF   R+AA ++ A + G I+NV++ +  TG  + + +AAS A V+SMT++LA+ LAP VRVN V  G +D  WI EG  G  + EM+    P+ +     DIADAV + A G    TGQ++ +DGG+T+
Sbjct:    7 PVAIVTGGATGVGRACVLQLAKRGFDVFLNYSRSESDALQTASDAGAFGTTITPVKCDVSQDAEVRAMLDRLRQQHGRLDVVVNNAAMTDFVPYSDLEGLTEAKWDRVLAVNLKGTFFVSRAAAELLTAGQGGAIVNVSSVAAITGMGSSIAYAASKAGVNSMTKSLAKTLAPKVRVNAVCPGPIDSRWIREGIPGWSIDEMVA-DYPIPKPSSPDDIADAVIFFALGTSMTTGQILSVDGGQTL 250          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A2D7EGU4_9BACT (3-ketoacyl-ACP reductase n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2D7EGU4_9BACT)

HSP 1 Score: 144 bits (364), Expect = 5.520e-39
Identity = 84/244 (34.43%), Postives = 136/244 (55.74%), Query Frame = 1
Query:   13 PVAVITDWRGLAGPAICMQLARAGFSLFIN----GPEEEIFELQSQDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDI---TSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTGN--HLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGG-GDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            PVA++T      G A  +Q A  G+ + +N      E +   ++++ +   +L +  D +D+  VQQ+  +    FGRLDV+VNN    N    SD+   T  +WD + +VN++  F   R+AAP+++    G ++NV++ +  TG+   + + AS  A+++MT++LAR LAP +RVN V  G +D  WI EG  G   E +    PL +     DIADAV + + G    TGQL+ +DGG+T+
Sbjct:    7 PVALVTGSATGVGRACVLQFASRGYDVVVNYSRSAHEAKETVIKAKSLGADVLLVQCDVSDDSLVQQMIDSIKSQFGRLDVVVNNAATTNFIDHSDLDSMTEEIWDRILEVNLKGAFFVTRAAAPLLEVSANGAVVNVSSVAGITGSGSSIAYCASKGALNTMTKSLARALAPEIRVNAVCPGPIDSRWIREGNPGTSIESMVADYPLPKASTPDDIADAVVFFSLGTSMATGQLLSVDGGQTL 250          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A5B9MGL9_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL n=4 Tax=Planctomycetes TaxID=203682 RepID=A0A5B9MGL9_9BACT)

HSP 1 Score: 144 bits (363), Expect = 7.580e-39
Identity = 89/245 (36.33%), Postives = 137/245 (55.92%), Query Frame = 1
Query:   13 PVAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQD----VDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWN---DAPLSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTGN--HLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGG--DLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            PVA++T      G A  +Q AR G+ + +N    E   LQ+      +  K+L    D +D+  V+++ L   E FGRLDVLVNN    +      L  +T AMWD +  VN++  F   R+AA +++    G ++NV++ +  TG+   + + AS A +++MT++LAR L+P VRVN V  G +D  WI EG    DL  M+    P+ +  +  DIADAV + ATG    TGQ++ +DGG+T+
Sbjct:    6 PVALVTGSATGVGRACVLQFARRGYDVVVNYSRSESEALQTASDAKALGAKVLVEGCDVSDDARVRKMVLKVGETFGRLDVLVNNAATTSFIEHGDLEGLTEAMWDRMLAVNLKGVFFVTRAAADLLRHGGSGSVVNVSSVAGITGSGSSIAYCASKAGLNTMTKSLARVLSPEVRVNAVCPGPIDSRWIKEGNPKWDLDAMVA-GYPIPKASQPDDIADAVLFFATGTSMATGQILSVDGGQTL 249          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: UPI001BC788F0 (SDR family oxidoreductase n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=UPI001BC788F0)

HSP 1 Score: 141 bits (355), Expect = 1.090e-37
Identity = 91/239 (38.08%), Postives = 133/239 (55.65%), Query Frame = 1
Query:   16 VAVITDWRGLAGPAICMQLARAGFSLFIN----GPEEEIFELQSQDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDITSAM---WDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGG 705
            VA+IT      G A+   LA+ G ++ IN    GPE E    +     G+ +    D  D+  ++ +F A  E +GRLD+LVN+    N  PL D+       WD    VNV+  F  CR+AAP ++A + G I+NV++ +  TG  + + +AAS  AV+++T++LAR LAP VRVN VA G++   W+  G  D     +K +PL R C   D+A+ V  L T A  +TGQ IV+DGG
Sbjct:    7 VAIITGGATGIGKAVAFNLAKEGATVVINYSRSGPEAEETLNEVIAAGGQGMTWQADVADDAKIRAMFTAVAEKYGRLDILVNSAGTTNFVPLGDLEGLKEEYWDRAMAVNVKGLFFCCRAAAPYLKASK-GAIVNVSSRAGLTGVGSSMAYAASKGAVNTLTKSLARVLAPEVRVNAVAPGIVMTRWV-AGREDHILRGSKDVPLGRACEAEDVAEVVMSLITNAGMITGQTIVVDGG 243          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A517Z7N6_9PLAN (Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z7N6_9PLAN)

HSP 1 Score: 140 bits (354), Expect = 1.670e-37
Identity = 84/248 (33.87%), Postives = 138/248 (55.65%), Query Frame = 1
Query:    1 MSDFPVAVITDWRGLAGPAICMQLARAGFSLFIN--GPEEEIFELQS--QDVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNY---YAWNDAPLSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEG-GGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            +S+ PVA++T      G A  ++ A AG+ + IN    E+E  +  +  ++     L +  D +D+D+V+ +     E FGRLD LVNN    Y    + L ++T   WD +  VNV+  F   R+A P+++  +   ++N+++ +  +G  + + + AS  A+++MT++LAR LAP +RVN V  G +D  W+ E   GD  E +T   P+ R     D+AD V YLA G +  TGQ +V+DGG T+
Sbjct:    3 VSERPVALVTGSATGVGRACALRFAAAGYDVVINYTRSEQEAADTAAAAEEAGASALVVRCDVSDDDAVRSMIGQIGERFGRLDRLVNNAACTYFIEHSDLEELTGDKWDRILSVNVKGAFFVTRAAVPLLRDAKGASVVNISSVAGVSGLGSSIAYCASKGALNTMTKSLARTLAPEIRVNAVCPGPIDTRWLREWKSGDEIEEMTSDYPIPRAAVPDDVADVVMYLADGTELTTGQCLVVDGGRTI 250          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A7C3YR87_9BACT (Glucose 1-dehydrogenase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7C3YR87_9BACT)

HSP 1 Score: 138 bits (348), Expect = 1.180e-36
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 1
Query:   16 VAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQ----DVDGKILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDI---TSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETV 714
            VA+IT      G AI +  A+ G S+ IN    E   + +     ++    + +  D +D   V+ +     E FGRLD+LVN+         SD+   T  +WD    VN++ TF  CR+  PIM++ + G IIN+++ +  TG  + + ++AS A V  +T++LAR LAP +RVNT+A G +D  W  EG  + R+M   + P+KR+ +  D+A +  YL   +DF+TGQ+IV+DGG+++
Sbjct:    7 VALITGGGTGIGRAIGLAFAKEGASIAINYSRSENDAMATAKEITELGVSAMTVKADVSDNSQVRDMIKKVAEKFGRLDILVNSAGTTTFVEPSDLEGLTEEIWDRAIAVNLKGTFFCCRAVVPIMKSNDGGSIINISSIAGITGVGSSMAYSASKAGVICLTKSLARTLAPQIRVNTIAPGFVDSRWT-EGWDEYRKMHISATPMKRVAKPEDVAISALYLVH-SDFVTGQVIVVDGGKSI 246          
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Match: A0A7C4BN83_9BACT (Glucose 1-dehydrogenase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C4BN83_9BACT)

HSP 1 Score: 137 bits (346), Expect = 2.340e-36
Identity = 85/240 (35.42%), Postives = 139/240 (57.92%), Query Frame = 1
Query:   16 VAVITDWRGLAGPAICMQLARAGFSLFIN-GPEEEIFELQSQDVDG---KILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNY---YAWNDAPLSDITSAMWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTG--NHLQFAASSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSIPLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGE 708
            VA+IT      G AI +  AR G S+ IN    E+   L  QD++G     +++  D +++  V+++    +  FGRLD+LVN+    +  N   L  +T  MWD++  VN++ TF  CR+  P M+    G IIN+++ +  +G  + + ++AS A V  +T++LAR LAP +RVNT+A G +D  W  +   + +EM  K+ P+KR+    D+A +  YL   +DF+TGQ+I++DGG 
Sbjct:    7 VALITGGGTGIGRAIALSFAREGASVAINYSRSEKDATLTVQDINGLGVPSMSIKADVSNDSQVREMVDKVVSNFGRLDILVNSAGTTFFVNADDLEGLTDEMWDKILDVNLKGTFFCCRAVVPEMKKNGCGSIINISSIAGISGVGSSIAYSASKAGVICLTKSLARTLAPEIRVNTIAPGFVDTRWTSDWQ-EYKEMHEKATPMKRVANAEDVAVSAIYLVH-SDFVTGQVIIVDGGR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XLG1_9BURK9.320e-11266.38SDR family oxidoreductase n=1 Tax=Burkholderiales ... [more]
A0A7Z9PQR9_9BACT7.510e-8754.85SDR family oxidoreductase n=1 Tax=Phycisphaerales ... [more]
A0A5C6EE32_9BACT2.430e-4035.253-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A5C5WG97_9BACT6.830e-4037.96Enoyl-[acyl-carrier-protein] reductase [NADPH] Fab... [more]
A0A2D7EGU4_9BACT5.520e-3934.433-ketoacyl-ACP reductase n=1 Tax=Rhodopirellula sp... [more]
A0A5B9MGL9_9BACT7.580e-3936.33Enoyl-[acyl-carrier-protein] reductase [NADPH] Fab... [more]
UPI001BC788F01.090e-3738.08SDR family oxidoreductase n=1 Tax=Syntrophomonadac... [more]
A0A517Z7N6_9PLAN1.670e-3733.87Enoyl-[acyl-carrier-protein] reductase [NADPH] Fab... [more]
A0A7C3YR87_9BACT1.180e-3635.12Glucose 1-dehydrogenase n=1 Tax=Candidatus Poribac... [more]
A0A7C4BN83_9BACT2.340e-3635.42Glucose 1-dehydrogenase n=1 Tax=bacterium TaxID=18... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11603contigP-wetherbeei_contig11603:825..1544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog886293.Sinac_1359
PFAMsadh_short_C2
Model size720
Max annot lvl203682|Planctomycetes
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.48e-36
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,2IYKS@203682|Planctomycetes
EC1.1.1.100
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size720
COG categoryIQ
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185918.433842-CDS-P-wetherbeei_contig11603:824..15441683185918.433842-CDS-P-wetherbeei_contig11603:824..1544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11603 825..1544 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11603.1.1prot_P-wetherbeei_contig11603.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11603 825..1544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11603.1.1

>prot_P-wetherbeei_contig11603.1.1 ID=prot_P-wetherbeei_contig11603.1.1|Name=mRNA_P-wetherbeei_contig11603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp
MSDFPVAVITDWRGLAGPAICMQLARAGFSLFINGPEEEIFELQSQDVDG
KILALPFDANDEDSVQQVFLAGLEVFGRLDVLVNNYYAWNDAPLSDITSA
MWDEVWQVNVRNTFSSCRSAAPIMQAQEFGKIINVTTTSCFTGNHLQFAA
SSAAVHSMTRTLARELAPYVRVNTVAAGMLDEPWIDEGGGDLREMLTKSI
PLKRLCRTTDIADAVTYLATGADFMTGQLIVLDGGETVR*
back to top

mRNA from alignment at P-wetherbeei_contig11603:825..1544-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11603.1.1 ID=mRNA_P-wetherbeei_contig11603.1.1|Name=mRNA_P-wetherbeei_contig11603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig11603:825..1544- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGATTTCCCCGTTGCGGTCATAACCGACTGGCGCGGTTTGGCCGG TCCGGCCATCTGTATGCAGCTCGCGAGAGCTGGCTTCTCTCTCTTCATCA ATGGACCCGAAGAAGAAATTTTCGAGCTCCAATCCCAGGATGTCGACGGC AAGATTCTTGCCCTGCCTTTTGACGCAAATGACGAAGACTCCGTCCAACA GGTCTTCCTGGCTGGCCTGGAGGTCTTTGGTCGTCTCGACGTCCTCGTAA ACAACTACTACGCCTGGAACGATGCCCCTCTAAGCGACATCACCTCGGCG ATGTGGGACGAGGTCTGGCAAGTCAACGTCCGCAATACCTTCAGTTCCTG TCGCTCTGCGGCCCCCATTATGCAGGCGCAGGAATTTGGGAAAATCATCA ACGTGACGACCACATCCTGCTTTACGGGCAACCACCTCCAGTTCGCCGCT TCCTCGGCTGCGGTCCACTCCATGACTCGCACCCTGGCTCGCGAGCTCGC CCCCTACGTGCGAGTCAATACGGTCGCGGCAGGAATGCTCGACGAGCCCT GGATCGACGAAGGCGGAGGGGATTTGCGCGAAATGTTGACCAAGTCCATT CCTCTGAAAAGGCTTTGCCGCACGACGGACATCGCGGATGCCGTCACCTA TCTGGCCACTGGAGCTGACTTTATGACCGGCCAACTCATCGTTCTGGACG GCGGAGAAACCGTCCGCTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11603:825..1544-

>mRNA_P-wetherbeei_contig11603.1.1 ID=mRNA_P-wetherbeei_contig11603.1.1|Name=mRNA_P-wetherbeei_contig11603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig11603:825..1544- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGATTTCCCCGTTGCGGTCATAACCGACTGGCGCGGTTTGGCCGG
TCCGGCCATCTGTATGCAGCTCGCGAGAGCTGGCTTCTCTCTCTTCATCA
ATGGACCCGAAGAAGAAATTTTCGAGCTCCAATCCCAGGATGTCGACGGC
AAGATTCTTGCCCTGCCTTTTGACGCAAATGACGAAGACTCCGTCCAACA
GGTCTTCCTGGCTGGCCTGGAGGTCTTTGGTCGTCTCGACGTCCTCGTAA
ACAACTACTACGCCTGGAACGATGCCCCTCTAAGCGACATCACCTCGGCG
ATGTGGGACGAGGTCTGGCAAGTCAACGTCCGCAATACCTTCAGTTCCTG
TCGCTCTGCGGCCCCCATTATGCAGGCGCAGGAATTTGGGAAAATCATCA
ACGTGACGACCACATCCTGCTTTACGGGCAACCACCTCCAGTTCGCCGCT
TCCTCGGCTGCGGTCCACTCCATGACTCGCACCCTGGCTCGCGAGCTCGC
CCCCTACGTGCGAGTCAATACGGTCGCGGCAGGAATGCTCGACGAGCCCT
GGATCGACGAAGGCGGAGGGGATTTGCGCGAAATGTTGACCAAGTCCATT
CCTCTGAAAAGGCTTTGCCGCACGACGGACATCGCGGATGCCGTCACCTA
TCTGGCCACTGGAGCTGACTTTATGACCGGCCAACTCATCGTTCTGGACG
GCGGAGAAACCGTCCGCTAA
back to top