mRNA_P-wetherbeei_contig11602.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11602.3.1
Unique NamemRNA_P-wetherbeei_contig11602.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A1H1HCE4_9HYPH (Protein O-GlcNAc transferase n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1HCE4_9HYPH)

HSP 1 Score: 59.7 bits (143), Expect = 2.250e-6
Identity = 32/62 (51.61%), Postives = 36/62 (58.06%), Query Frame = 1 
Query:  625 LFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVA 810
            L+TL Y E +S E L AEH   G           A+F NSPDP R L  GY+SGDFR HSVA
Sbjct: 1769 LYTLNYDETVSQEALHAEHEAWGKSEGGRFPTSGARFANSPDPARRLRVGYVSGDFRNHSVA 1830
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A7C4EK26_9BACT (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C4EK26_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 8.170e-6
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 1 
Query:  607 VAQSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVAI 813
            V  S  L T+ Y ER S E + AEH+    + E  VR   A F N PDP+R L  GY+S DF+ HSV+ 
Sbjct:  368 VVFSNCLLTMHYDERRSPESIIAEHIAYAEQLEKPVRADHASFPNEPDPDRKLRIGYVSPDFKRHSVSF 436
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: UPI0010C10C4C (glycosyltransferase family 41 protein n=1 Tax=Massilia sp. HP4 TaxID=2562316 RepID=UPI0010C10C4C)

HSP 1 Score: 57.4 bits (137), Expect = 1.070e-5
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:  610 AQSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVA 810
            A S  LF L     I+ E LFAEHL  G +    V P  A F N+PDPER L  G++SGD R H+VA
Sbjct:  304 AHSNLLFCLSEVSGITPEELFAEHLHYGRQVARNVAP-PAPFDNTPDPERRLRVGFVSGDLRNHAVA 369
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A6J5EES3_9BURK (Beta-barrel assembly-enhancing protease n=1 Tax=Paraburkholderia humisilvae TaxID=627669 RepID=A0A6J5EES3_9BURK)

HSP 1 Score: 56.2 bits (134), Expect = 2.760e-5
Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 1 
Query:  601 SGVAQSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSV 807
            +  A    +F L +SE I  + LFAEH+  G   E  +R       NS DPER LH G++SGDFR H+V
Sbjct:  536 NSTAFENLVFCLSHSEEIDPDTLFAEHVRYGEHFEKPLRKRWKPHRNSKDPERPLHIGFISGDFRAHAV 604
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A533QGY2_9PROT (Beta-barrel assembly-enhancing protease n=2 Tax=Candidatus Accumulibacter sp. TaxID=2053492 RepID=A0A533QGY2_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 2.760e-5
Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 1 
Query:  625 LFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVA 810
            L+TL + + I A  LFAEH   G   EA +R  R    N  DPER LH G +S DFR H+VA
Sbjct:  559 LYTLSHHQAIDAATLFAEHRRFGAMIEAPLRDTRRPHDNRRDPERRLHIGLVSADFRNHAVA 620
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A1F4AZH1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AZH1_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 2.900e-5
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 
Query:  613 QSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVAI 813
            QS  LF L +SERI+ + LF  H   G   EA        F NSPDP+R L  GY+SGDF  H VA+
Sbjct:  352 QSAELFALNFSERITDQVLFERHRHFGECIEAAYPARSLSFANSPDPDRRLRIGYVSGDFCFHVVAL 418
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BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Match: A0A5C7G754_9BURK (Tetratricopeptide repeat protein n=1 Tax=Massilia arenae TaxID=2603288 RepID=A0A5C7G754_9BURK)

HSP 1 Score: 55.5 bits (132), Expect = 4.620e-5
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 
Query:  610 AQSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPDPERVLHGGYLSGDFRGHSVA 810
            A S  LF L    RI+ E LFAEHL  G   E    P  A   N+P+PER L  G++SGD R H+VA
Sbjct:  304 AHSNMLFCLSEMPRITPEALFAEHLAYGSLIEQRTAP-PAPRDNTPEPERPLRIGFVSGDLRNHAVA 369
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11602.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A1H1HCE4_9HYPH2.250e-651.61Protein O-GlcNAc transferase n=3 Tax=unclassified ... [more]
A0A7C4EK26_9BACT8.170e-644.93Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
UPI0010C10C4C1.070e-549.25glycosyltransferase family 41 protein n=1 Tax=Mass... [more]
A0A6J5EES3_9BURK2.760e-543.48Beta-barrel assembly-enhancing protease n=1 Tax=Pa... [more]
A0A533QGY2_9PROT2.760e-548.39Beta-barrel assembly-enhancing protease n=2 Tax=Ca... [more]
A0A1F4AZH1_9PROT2.900e-547.76Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A5C7G754_9BURK4.620e-547.76Tetratricopeptide repeat protein n=1 Tax=Massilia ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11602contigP-wetherbeei_contig11602:1312..2124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog926566.Terro_4283
PFAMsGlyco_transf_41,TPR_8
Model size813
Max annot lvl204432|Acidobacteriia
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.96e-06
EggNOG OGsCOG0457@1|root,COG3914@1|root,COG0457@2|Bacteria,COG3914@2|Bacteria,3Y7I4@57723|Acidobacteria,2JMW8@204432|Acidobacteriia
DescriptionGlycosyl transferase family 41
Cds size813
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185918.3277073-CDS-P-wetherbeei_contig11602:1311..21241683185918.3277073-CDS-P-wetherbeei_contig11602:1311..2124Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11602 1312..2124 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11602.3.1prot_P-wetherbeei_contig11602.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11602 1312..2124 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11602.3.1

>prot_P-wetherbeei_contig11602.3.1 ID=prot_P-wetherbeei_contig11602.3.1|Name=mRNA_P-wetherbeei_contig11602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MIEAGIAAEGRGDLERAEGCFRAAVGADPRSARARMNLGIVLLGKGDPAS
ALAEQVEAVRLDPALSHAHYNLALACLGIGEPARAEGGFREALRLHPDFP
EAWVGLAEVLDSAGQPGRALEALDAASALRPGYAGALFNAGLLLRRLGRL
DEAESRLRSVPDDHPDRANALTALAAIVRDQGRIDEAVAIARSVVDRLPD
SGVAQSEYLFTLGYSERISAEGLFAEHLWAGCRAEAEVRPWRAQFGNSPD
PERVLHGGYLSGDFRGHSVAI
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mRNA from alignment at P-wetherbeei_contig11602:1312..2124+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11602.3.1 ID=mRNA_P-wetherbeei_contig11602.3.1|Name=mRNA_P-wetherbeei_contig11602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig11602:1312..2124+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGAGGCCGGGATCGCCGCCGAGGGTCGGGGCGACCTAGAGCGTGC
CGAGGGCTGCTTCCGGGCCGCGGTCGGGGCGGATCCACGATCGGCCCGCG
CCAGGATGAACCTCGGCATAGTGCTGCTCGGCAAGGGTGATCCCGCTTCT
GCGCTCGCCGAGCAAGTTGAGGCCGTCAGGCTTGATCCGGCGCTCTCGCA
CGCACATTACAACCTCGCCCTTGCCTGCCTGGGCATCGGTGAGCCTGCAC
GCGCAGAAGGCGGGTTTCGCGAGGCGTTGAGGCTGCATCCCGATTTCCCG
GAAGCGTGGGTGGGCCTGGCCGAAGTGCTCGATTCTGCGGGGCAACCGGG
AAGGGCGCTTGAAGCACTGGATGCGGCCAGCGCCCTTCGCCCAGGCTATG
CGGGTGCATTGTTCAATGCGGGCCTGCTGCTTCGCAGGCTGGGTAGGCTC
GACGAAGCCGAGTCTCGCTTGCGCAGCGTCCCCGACGATCATCCTGATCG
CGCCAATGCCCTGACCGCCCTCGCCGCAATCGTGCGCGACCAGGGGCGGA
TCGACGAAGCCGTCGCAATTGCGCGATCGGTGGTGGACCGGCTCCCCGAC
TCCGGCGTCGCGCAAAGCGAGTACCTCTTCACCCTCGGCTACTCTGAGCG
CATAAGCGCGGAGGGGCTGTTCGCCGAGCACCTGTGGGCCGGGTGCCGCG
CCGAGGCCGAGGTCAGGCCATGGCGCGCCCAATTTGGGAATTCCCCGGAT
CCGGAGCGTGTCCTCCATGGGGGGTACCTGTCGGGCGATTTCCGCGGGCA
TTCGGTGGCGATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11602:1312..2124+

>mRNA_P-wetherbeei_contig11602.3.1 ID=mRNA_P-wetherbeei_contig11602.3.1|Name=mRNA_P-wetherbeei_contig11602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig11602:1312..2124+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGAGGCCGGGATCGCCGCCGAGGGTCGGGGCGACCTAGAGCGTGC
CGAGGGCTGCTTCCGGGCCGCGGTCGGGGCGGATCCACGATCGGCCCGCG
CCAGGATGAACCTCGGCATAGTGCTGCTCGGCAAGGGTGATCCCGCTTCT
GCGCTCGCCGAGCAAGTTGAGGCCGTCAGGCTTGATCCGGCGCTCTCGCA
CGCACATTACAACCTCGCCCTTGCCTGCCTGGGCATCGGTGAGCCTGCAC
GCGCAGAAGGCGGGTTTCGCGAGGCGTTGAGGCTGCATCCCGATTTCCCG
GAAGCGTGGGTGGGCCTGGCCGAAGTGCTCGATTCTGCGGGGCAACCGGG
AAGGGCGCTTGAAGCACTGGATGCGGCCAGCGCCCTTCGCCCAGGCTATG
CGGGTGCATTGTTCAATGCGGGCCTGCTGCTTCGCAGGCTGGGTAGGCTC
GACGAAGCCGAGTCTCGCTTGCGCAGCGTCCCCGACGATCATCCTGATCG
CGCCAATGCCCTGACCGCCCTCGCCGCAATCGTGCGCGACCAGGGGCGGA
TCGACGAAGCCGTCGCAATTGCGCGATCGGTGGTGGACCGGCTCCCCGAC
TCCGGCGTCGCGCAAAGCGAGTACCTCTTCACCCTCGGCTACTCTGAGCG
CATAAGCGCGGAGGGGCTGTTCGCCGAGCACCTGTGGGCCGGGTGCCGCG
CCGAGGCCGAGGTCAGGCCATGGCGCGCCCAATTTGGGAATTCCCCGGAT
CCGGAGCGTGTCCTCCATGGGGGGTACCTGTCGGGCGATTTCCGCGGGCA
TTCGGTGGCGATC
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