prot_P-wetherbeei_contig116.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig116.2.2
Unique Nameprot_P-wetherbeei_contig116.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length502
Homology
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A699YXE3_HAELA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YXE3_HAELA)

HSP 1 Score: 80.5 bits (197), Expect = 7.360e-14
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLVGH 85
            DP LER+FRGH+D VT+V F+++ KQL+S S DGC+M+W+F+PQLRA R  GH
Sbjct:    5 DPTLERSFRGHKDAVTSVCFNNNMKQLISGSLDGCVMIWNFKPQLRAYRFAGH 57          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A482SC39_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SC39_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 2.810e-13
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLVGHTAAV 89
            DP LERTF+GH+  VT+VSFS   KQL S S D  +MLW+F+PQLRA R VGH  ++
Sbjct:   13 DPSLERTFKGHKSYVTSVSFSPTLKQLASGSGDNNVMLWNFKPQLRAFRFVGHKVSI 69          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: D8UD37_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UD37_VOLCA)

HSP 1 Score: 82.4 bits (202), Expect = 4.390e-13
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLVGHTAA 88
            DP LER+FRGH+D VT+V F+H+ KQLVS S D C+M+W+F+PQLRA R  GH A+
Sbjct:    2 DPTLERSFRGHKDAVTSVCFNHNMKQLVSGSLDNCVMVWNFKPQLRAFRFAGHKAS 57          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A3F2RKG0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKG0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.790e-12
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLVGHTAAV 89
            +P LERTFRGH+  VT V+F  +A+Q+ SSS DG +M+W+F+PQLRA R  GH   V
Sbjct:    3 NPSLERTFRGHKSAVTGVNFHPNAQQVASSSLDGVVMVWNFKPQLRAFRFKGHAGPV 59          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A5J4XNY1_9CHLO (POC1 centriolar protein A (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNY1_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 8.110e-12
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0
Query:   30 EQRDPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATR 81
            +  DP LER+FRGH+D VT+V+F+H+ KQL+S S DGC+M+W+F+PQLRA R
Sbjct:   10 QPEDPTLERSFRGHKDAVTSVAFNHNMKQLISGSLDGCVMVWNFKPQLRAFR 61          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A7S1AMN1_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AMN1_NOCSC)

HSP 1 Score: 74.3 bits (181), Expect = 1.430e-11
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLV 83
            DP LER FRGHR  VT V F H+ +Q+VSSS DGC+ +WHFRPQ+R  R V
Sbjct:   11 DPSLERAFRGHRGAVTGVVFLHEEQQVVSSSLDGCVFVWHFRPQMRPYRFV 61          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A6A0A6V2_HAELA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A6V2_HAELA)

HSP 1 Score: 75.1 bits (183), Expect = 2.720e-11
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query:   33 DPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATR 81
            DP LER+FRGH+D VT+V F+++ KQL+S S DGC+M+W+F+PQLRA R
Sbjct:    5 DPTLERSFRGHKDAVTSVCFNNNMKQLISGSLDGCVMIWNFKPQLRAYR 53          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A2J8A9K8_9CHLO (POC1 centriolar A n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A9K8_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 2.760e-11
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   19 SKAAQIALPPPEQ-RDPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATR 81
            +K+    LP   Q  DP LER+FRGH+D VT+V F+H+ KQ+VS S D C+M+W+F+PQLRA R
Sbjct:    3 AKSGMAPLPTESQVEDPTLERSFRGHKDAVTSVCFNHNMKQMVSGSLDNCVMVWNFKPQLRAFR 66          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A8J4FDZ9_9CHLO (Uncharacterized protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4FDZ9_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 2.760e-11
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   18 GSKAAQIALPPPEQ-RDPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATR 81
            G++     LP   Q  DP LER+FRGH+D VT+V F+H+ KQLVS S D C+M+W+F+PQLRA R
Sbjct:    5 GARHGLAPLPAESQVEDPTLERSFRGHKDAVTSVCFNHNMKQLVSGSLDNCVMVWNFKPQLRAFR 69          
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Match: A0A5F8H718_MONDO (Uncharacterized protein n=9 Tax=Metatheria TaxID=9263 RepID=A0A5F8H718_MONDO)

HSP 1 Score: 76.3 bits (186), Expect = 3.120e-11
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   28 PPEQRDPELERTFRGHRDVVTAVSFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLV 83
            P  + DP LER FRGH+D VT+V FS + KQLVS S D CLM+WH +P +RA R V
Sbjct:   12 PGRKEDPSLERNFRGHKDAVTSVDFSANRKQLVSGSMDACLMIWHMKPHMRAYRFV 67          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig116.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A699YXE3_HAELA7.360e-1462.26WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A482SC39_9ARCH2.810e-1359.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D8UD37_VOLCA4.390e-1362.50Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A3F2RKG0_9STRA2.790e-1256.14Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A5J4XNY1_9CHLO8.110e-1261.54POC1 centriolar protein A (Fragment) n=1 Tax=Trebo... [more]
A0A7S1AMN1_NOCSC1.430e-1162.75Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A6A0A6V2_HAELA2.720e-1163.27WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A2J8A9K8_9CHLO2.760e-1154.69POC1 centriolar A n=1 Tax=Tetrabaena socialis TaxI... [more]
A0A8J4FDZ9_9CHLO2.760e-1155.38Uncharacterized protein n=5 Tax=Volvox TaxID=3066 ... [more]
A0A5F8H718_MONDO3.120e-1158.93Uncharacterized protein n=9 Tax=Metatheria TaxID=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 269..283
score: 38.98
coord: 143..157
score: 33.03
coord: 227..241
score: 43.71
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 117..156
e-value: 3.9E-8
score: 43.0
coord: 243..282
e-value: 4.5E-11
score: 52.8
coord: 33..72
e-value: 3.3E-9
score: 46.6
coord: 75..114
e-value: 5.5E-6
score: 35.9
coord: 201..240
e-value: 3.2E-11
score: 53.3
coord: 159..198
e-value: 1.1E-10
score: 51.5
coord: 285..324
e-value: 1.1E-9
score: 48.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 245..282
e-value: 3.4E-9
score: 37.2
coord: 36..71
e-value: 1.9E-6
score: 28.5
coord: 203..240
e-value: 1.5E-7
score: 31.9
coord: 82..113
e-value: 2.3E-5
score: 25.0
coord: 163..198
e-value: 2.0E-8
score: 34.8
coord: 122..155
e-value: 1.8E-7
score: 31.7
coord: 286..323
e-value: 7.4E-6
score: 26.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 166..207
score: 16.423473
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 40..74
score: 13.616343
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 82..113
score: 13.750016
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 292..323
score: 12.814306
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 250..291
score: 17.994127
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 124..165
score: 15.35409
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 208..249
score: 15.554599
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 16..205
e-value: 3.9E-56
score: 192.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 206..344
e-value: 5.8E-45
score: 155.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..502
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 429..477
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 32..332
NoneNo IPR availablePANTHERPTHR44019WD REPEAT-CONTAINING PROTEIN 55coord: 32..332
NoneNo IPR availablePANTHERPTHR44019WD REPEAT-CONTAINING PROTEIN 55coord: 429..477
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 82..113
score: 11.391954
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 208..245
score: 11.998316
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 166..199
score: 12.921038
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 292..323
score: 10.653776
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 40..74
score: 11.286501
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 250..287
score: 13.632853
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 124..155
score: 12.209223
NoneNo IPR availableCDDcd00200WD40coord: 36..324
e-value: 5.12267E-96
score: 290.391
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 269..283
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 227..241
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 185..199
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 32..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig116contigP-wetherbeei_contig116:4287..7041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig116.2.2mRNA_P-wetherbeei_contig116.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig116 4236..7041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig116.2.2 ID=prot_P-wetherbeei_contig116.2.2|Name=mRNA_P-wetherbeei_contig116.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp
MLSADARGARARIGRPTGSKAAQIALPPPEQRDPELERTFRGHRDVVTAV
SFSHDAKQLVSSSQDGCLMLWHFRPQLRATRLVGHTAAVWHAEFAPSGAI
IASASKDRTVRLWAPSVKGESTVLKGHSGGVRHVAFSRNGRNIITASDDK
TVKVWAMPSAKFVCTLTGHNNWVRSAVFSPDSRLAVSGGDDRVVKVWDIG
RHECVHSFFDHDGVVNAVGFHPDGTCVASGSTDCTIKLWDARSSQLVQHY
PAHAAAVTDIAFHPRGNYLLSASDDRTMKIWDLREGRLLYTLQGHTGPVT
ACRFSTDGRQLASGGADSMVMAWRSNLDSLDAAAAAAATGTMPAVATVTL
RAAGRRAGGFGGATGFDAPAQCRQEQELMAATAMAAEPAAAVPPPVAVAA
PPRPSALPSRRMPEELVIEELVEREAGVGPAPVSREALPEALAGTLDHII
GQLDMVTRTLALLEQRLTITEDRVADLIGREAGAPAPPPPPPATTSAPPP
LS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf