mRNA_P-wetherbeei_contig11589.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A1F4ETF5_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4ETF5_9PROT) HSP 1 Score: 562 bits (1449), Expect = 1.170e-191 Identity = 272/491 (55.40%), Postives = 366/491 (74.54%), Query Frame = 1 Query: 103 ALAQAPAQ-PPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTG----TYAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQMIN 1560 A A APAQ PPP EKGPTTIDAE IEGV D+E+TA G AE+++DD TI+GE ++ N+EF R+E +GG R+++ DRFSG+RLR+ + ++ GT+++ + ++ ++PARG+A+RLEFLGKD ++++ ++TTC+PG++DW +E +EL+LDY T+ G RS LRF D T+ LP+ FPL+K RKSG L P + QST G EV +P+YWNIAPE+DAT+ P +SKRG QL+ E+RY+D RY+G LEY+PDD+ GR+RYG + LH Q F P L GR+D NKVSD RYFVDL S VRQ S G + R+ YL Y G +Y QARIQRFQTLQDPL+ IVSPY R PQLNF ++ +GG+AD L E+VRF+H TLV+G R S NPT++ P LAPG+F TP+AGLRYA Y L VA G RQ +++PW+S+DSGLVF+R + G++ +QTLEPR +Y+ Y NQD +P+FDTG+ADFN++Q+ + Sbjct: 13 AAAPAPAQTPPPPEKGPTTIDAEVIEGVGDVEVTARGSAEIKRDDLTIFGEVLRYNREFGRVEGEGGIRMDRLGDRFSGTRLRYSTVDDTGTLEEPNYLLQRREQPARGSAQRLEFLGKDRYRLQVANYTTCKPGQDDWRIEAEELELDYETEEGRARSARLRFFDATLW-LPFASFPLEKRRKSGILFPYFSQSTSRGTEVGVPFYWNIAPERDATLVPITMSKRGGQLKSEFRYMDARYSGELKLEYMPDDRVFGRSRYGFAALHTQQFTPALAGRLDYNKVSDHRYFVDLASHVRQASVGNLPRDAYLTYGGGFESISYNWQARIQRFQTLQDPLALIVSPYHRVPQLNFGASRSDIGGLADARLAAEWVRFSHPTLVDGVRTSLNPTVSMPLLAPGWFATPRAGLRYAGYGLHNVAPGQDRRQDVSIPWLSVDSGLVFDRQVRWFGQERTQTLEPRLFYVYVPYRNQDQIPLFDTGLADFNYAQLFS 502
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A521VL90_9PROT (LPS-assembly protein LptD n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VL90_9PROT) HSP 1 Score: 542 bits (1397), Expect = 2.620e-183 Identity = 279/519 (53.76%), Postives = 356/519 (68.59%), Query Frame = 1 Query: 22 PMQLFTARAPALLAACFASWCAALSGAALAQAPAQPPP-KEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTGT-----YAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQMIN 1560 PMQ AR P + + A + A + A A P P K GPTTI+A IEGV + E++A G+ ELR+D+ IY E ++ N+EF R+EADGG R+E+ DRF GSRLRFD ++ G ++ F MR ARG+AERLEFLG+D ++ GSFTTCEPGR DW E +EL+LDY G +R G LRF DTT+ +P FPL+ RKSGFLTP Y Q+TR GLE++ PYYWNIAPE+D T+TP Y+SKRG QL+ +YRY+D RY G EYLP+DK G +R G+++ H F P G VD N+VSD RY VD+ S+VRQ + G + REG+++Y+ GT Y Q R+QRFQTLQDPL+PIVSPY RAPQ N + +GG D+++P EYVRFTH TLVEG R+S PT++ P LAPG+FVTP+ GL YA Y L VA G RQ++ VPW SLD+GLVFER A + G +F+QTLEPR +Y A Y QD VPVFDTG+ADFN +Q+ + Sbjct: 23 PMQHRRARGPVVGTSGLAMLLILVLVAPRSWAQAVPSPAKAVGPTTIEALSIEGVSEFEVSARGQVELRRDNLGIYSELLRYNREFGRVEADGGVRIERDGDRFFGSRLRFDLNSDTGVFEEPRFVMRR-TLTARGSAERLEFLGQDRIRLVGGSFTTCEPGREDWRFEARELELDYEAGEGRLREGRLRFFDTTLLAIPRGTFPLENRRKSGFLTPHYSQNTRRGLEISAPYYWNIAPERDLTLTPVYMSKRGPQLKTQYRYLDARYDGDLRWEYLPEDKVLGTSRSGLTYRHDHRFAPDWVGHVDFNRVSDDRYLVDMSSQVRQITLGNLNREGFMRYS-GTAGATHYFLQGRVQRFQTLQDPLAPIVSPYNRAPQFNAGLTRQDIGGRLDLSMPAEYVRFTHHTLVEGARLSFGPTLSMPLLAPGHFVTPRLGLHYADYRLSRVAPGQAERQSVTVPWASLDAGLVFERPANLFGGEFTQTLEPRLFYAYAPYRAQDAVPVFDTGLADFNSAQLFS 539
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A1F4B4X5_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B4X5_9PROT) HSP 1 Score: 538 bits (1386), Expect = 5.660e-182 Identity = 264/486 (54.32%), Postives = 346/486 (71.19%), Query Frame = 1 Query: 109 AQAPAQPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYN----TGTYAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 AQ A PP K GPTTI+A IEGV + E+TA G ELR+DD +IY E+++ N+EF RIEADGG R+E+ DRF G RL FD N+ G + F MR ++ ARG+AERLEFLG++ ++ GSFT+CEPGR+DWS E + L+LD++ QVG VR G LRF DTT+ +P FPL++ RKSG LTP Y Q+TR GLE+ +P+YWNIAPEQD +TP Y+SKRG QL+ +YRY+D Y+G + LP DK G R S H+ F PG GR+D N+VSD RYFVDL +++RQ + G + RE + QYN T +YA QAR+Q FQTLQDPL+PIVSPY R PQLN S + G D+++P EYVRFTH++LVEG R+S +P++ P +PG FV PK G+ + Y L+ VAAG RQ I+VPW S+D+GL+FERD + +GR +QTLEPR YY+ A Y +QD+VP+FDTG+ADFN++Q+ Sbjct: 29 AQGGATPPEKRAGPTTIEALSIEGVSEFEVTARGSVELRRDDISIYSEQLRYNREFGRIEADGGVRIERDGDRFFGPRLSFDLNNDTGFFEQPNFIMRR-NQTARGSAERLEFLGRNRLRLTGGSFTSCEPGRDDWSFEARTLELDFDAQVGKVRDGRLRFFDTTLLAIPAGSFPLERTRKSGLLTPYYSQNTRRGLEIGVPFYWNIAPEQDLLLTPVYMSKRGEQLKTQYRYLDRSYSGELRWDILPSDKELGVRRSAQSLQHEHRFFPGWTGRIDYNRVSDDRYFVDLATQLRQITAGNLLREVFTQYNGSIGTTSYALQARVQSFQTLQDPLAPIVSPYRRVPQLNASLLQQSFDGRLDISVPAEYVRFTHASLVEGARLSLDPSVALPLQSPGRFVIPKIGVHHVDYRLERVAAGQAERQGISVPWASVDAGLIFERDVRWSGRSLTQTLEPRLYYVYAPYRSQDSVPLFDTGLADFNYAQL 513
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A1F3YU71_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YU71_9PROT) HSP 1 Score: 536 bits (1381), Expect = 3.420e-181 Identity = 267/501 (53.29%), Postives = 347/501 (69.26%), Query Frame = 1 Query: 91 LSGA--ALAQAPAQPPP-------KEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTGT----YAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 LSGA A AQAPA P K KGPTTIDA+ IEGV ++E+TA G+ E +++D T+Y E ++ NQEF RIEADGG R +G+DRF GSRLR+++ ++ G + + + + G RG AERLEFLGKD ++ G FTTCEPG+ DW E EL++D QVGTVR G +F DTT+ LP+ F LD RKSGFL+P Y Q+TR GLE+ +PYYWNIAPE+D T+TP +++KRG QL+ ++RY+D YTG +++P D +R S LHQQ P L G +DLN+VSD+RYFVDL S+VRQ S GI+Q+ G L Y+ G Y +QR+QTLQDPL+PI PY R PQ NF T KN + G DV LP E+VRF+H TLVEGTR+S NPTI AP LAPGYF+TPK G+RYA Y L A G P RQ++++PW+SLDSG++FER G SQTLEPR +Y+ A + +Q +P+FDTG+ DFN++Q+ Sbjct: 15 LSGAPCAWAQAPAPASPAASAAAVKPKGPTTIDAQSIEGVSELEVTARGRVEFQREDLTVYSEFLRFNQEFGRIEADGGVRFLRGSDRFFGSRLRYNTRDDTGVFEGSNYILPGETTTMRGKAERLEFLGKDRIRLVQGMFTTCEPGKEDWRFEAGELEIDNEKQVGTVRDGRFKFFDTTLLPLPYGSFSLDNQRKSGFLSPMYSQNTRRGLELAVPYYWNIAPERDLTLTPSFMTKRGEQLKSDFRYLDRTYTGNLRYDFMPHDHVLRTSRSAFSLLHQQQITPQLSGSLDLNQVSDARYFVDLASQVRQVSTGILQQMGALNYSGGVAGIGYYFNTMVQRWQTLQDPLAPITPPYARLPQFNFGTAKNDIAGRFDVVLPGEFVRFSHPTLVEGTRLSLNPTIAAPILAPGYFLTPKVGVRYADYRLTHTAPGQPGRQSVSLPWMSLDSGMIFERGVNWFGESLSQTLEPRLFYVYAPFRDQSRIPLFDTGVTDFNYAQI 515
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: UPI0019ADAC40 (LPS-assembly protein LptD n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019ADAC40) HSP 1 Score: 534 bits (1376), Expect = 1.610e-180 Identity = 269/493 (54.56%), Postives = 341/493 (69.17%), Query Frame = 1 Query: 91 LSGAALAQAPA-QPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTGTYAA----QARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 LSGA LA A P + + P TI+A+ IEGV + E+TA G E +++D ++Y E ++ NQEF RIEADGG RL++G DRF G RLR+++ ++ G ++ TF M G + ARG+AERLEFLGKDH ++ SFTTCEPG W +E ELDLDY +VGT R LR +DTTI P+ FPL+K RKSGFL P Y Q+TR GLE+ +PYYWNIAPEQD T+TP +LSKRG QL+ YRY+ Y G LEY+P+D R R G + H+Q F P + GR+DLNKVSD RYFVDL S VRQ S G +QREG L YN Y Q R+QRFQTLQDPLSP +SPY R PQ+NF T K +V G+ D T P EYVRF H++LVEG R S NP ++ P+LAPGYFVTPK G+R+A Y L V P QT+ VP+ S+D GL+FER + G + +QTLEPR +Y+ A Y QD +P+FDT +ADFN++Q+ Sbjct: 15 LSGAQLAWAQGLAPAARPRAPATIEAQSIEGVSEFEVTARGSVEFQREDLSVYAEFLRFNQEFGRIEADGGVRLQRGVDRFFGPRLRYNTRDDTGVFEEPTFLM-GRVQVARGSAERLEFLGKDHLRLNRASFTTCEPGDKGWVIEAGELDLDYEEEVGTARDMRLRLLDTTIFSFPYATFPLEKRRKSGFLAPQYSQNTRRGLEIGIPYYWNIAPEQDLTVTPLFLSKRGEQLKSNYRYLSKDYAGQFRLEYMPNDDILKRPRSGYTLQHEQQFLPTVTGRLDLNKVSDDRYFVDLASHVRQISLGNVQREGLLTYNDSFYGMPTYLQGRVQRFQTLQDPLSPTLSPYHRVPQINFGTSKTEVAGLFDFTFPGEYVRFAHASLVEGARTSFNPQMSMPFLAPGYFVTPKIGMRHARYDLSRVGPAQPEHQTLNVPYGSVDGGLIFERGTNLFGENLTQTLEPRFFYVYAPYRAQDQIPLFDTTLADFNYAQL 506
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A521YZK0_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YZK0_9PROT) HSP 1 Score: 527 bits (1358), Expect = 5.720e-178 Identity = 257/492 (52.24%), Postives = 340/492 (69.11%), Query Frame = 1 Query: 100 AALAQAPA---QPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTGT----YAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 A +A APA QP +E PTTIDAERIEGV D+E+TA G AE+R+DD TI+G+ ++ N EF ++ +GG RL+ G DRF G RL +++ +E G + F ++ D PARG AE LEF GKD ++++ SFTTC PG++DW +E ++DLDY T+ G RS LRF I P+ FPL+ R+SG L P Y Q++ G E +PYYWNIAPE+DATITP ++KRG+QL+ ++RY++ Y G LEYLPDDK+ GR R G+S H Q F PGL G++D N+VSD RYFVDL S+VRQ S G +Q++GY+ Y+ Y+AQAR+Q+FQTLQDPL+PI PY R PQL FST N V G+ D LP EYV FTH TLV G+R S NPT+ P+L+PG+F+TPK GLR +YSL+ A G + +PW S D+GLVF+R+A+ G +QTLEPR +Y+ Y NQD +P+FDT +ADFNF Q+ Sbjct: 9 ALIAAAPALAQQPSVEEASPTTIDAERIEGVGDLEVTARGNAEIRRDDVTIFGDVLRRNSEFGTVQGEGGVRLQLGVDRFFGPRLEYNTLDETGVFESPGFQLQR-DLPARGKAEVLEFRGKDRYRLKGASFTTCRPGQDDWMLEASQIDLDYGTEEGEARSPRLRFFGVPILGFPFASFPLENRRRSGILAPYYSQTSNRGFEFGVPYYWNIAPERDATITPVLMTKRGLQLKNQFRYLEAPYAGELRLEYLPDDKQFGRRRTGVSLQHAQTFRPGLTGQIDFNRVSDDRYFVDLASQVRQVSIGNLQQDGYVNYSGSLGSLPYSAQARVQKFQTLQDPLAPITPPYHRVPQLTFSTGMNDVAGLLDAALPAEYVHFTHRTLVYGSRTSLNPTLAMPFLSPGWFLTPKLGLRQVSYSLERAALGQEASPHVQIPWFSADTGLVFDREARFFGDPLTQTLEPRLFYVYVPYRNQDQLPLFDTSLADFNFPQL 499
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A1F4ENS7_9PROT (LPS-assembly protein LptD n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4ENS7_9PROT) HSP 1 Score: 526 bits (1354), Expect = 3.880e-177 Identity = 259/491 (52.75%), Postives = 343/491 (69.86%), Query Frame = 1 Query: 100 AALAQAPAQPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTG----TYAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQMIN 1560 A LA +PA P GPTTI+A IEGV + E+TA G+ ELR+ + +Y + ++ N+EF R+EADGG R+E+ DRF G RL+FD ++ G D F MR ++ ARG+AERLEFLGKD ++ GSFTTCEPG+ DW E +EL+LDY + G +R G LRF DTT+ +P+ FPL++ RKSG LTP Y Q+TR GLE+ +P+YWNIAPEQD +TP +SKRG+QL+ +YRY++ Y G EYLP+DK G R G++ H+Q P GR+D NKVSD RYFVDL +++RQ + G + RE + QY+ +YA QAR+Q FQTLQDPL+PIVSPY R PQLN + + VGG DVT+P EYVRFTH +LVEGTR+S +P++ P APG+FV P+ G+ +A Y L A G P RQ ++VPW S D+GL+FER A+ G +QTLEPR YY+ A Y QD VP+FDTG+ADFN++Q+ + Sbjct: 31 AQLAASPAMP----AGPTTIEALSIEGVSEFEVTARGQVELRRGELNLYSDTLRYNREFGRVEADGGVRIERAGDRFFGPRLQFDLNSDTGVFDQPGFIMRR-EQTARGSAERLEFLGKDKLRLVGGSFTTCEPGKEDWRFEARELELDYEIEEGRMRDGRLRFFDTTLFAVPFATFPLERRRKSGLLTPHYSQNTRRGLEIGVPFYWNIAPEQDLLLTPVTMSKRGLQLKTQYRYLERSYAGDLRWEYLPEDKVLGERRSGLTLKHEQQLAPDWTGRLDFNKVSDDRYFVDLGTQMRQITTGNLLREAFSQYHGSIGDTSYALQARVQGFQTLQDPLAPIVSPYHRVPQLNAALLRQSVGGRLDVTVPAEYVRFTHHSLVEGTRVSLHPSLALPLAAPGHFVIPRFGVHHAEYRLARTAPGQPERQGVSVPWASADAGLIFERSARWFGEALTQTLEPRLYYVYAPYRAQDTVPLFDTGLADFNYAQLFS 516
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A536ZWH6_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZWH6_9PROT) HSP 1 Score: 518 bits (1334), Expect = 5.260e-174 Identity = 255/506 (50.40%), Postives = 348/506 (68.77%), Query Frame = 1 Query: 49 PALLAACFASWCAALSGAALAQAPAQPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYL-QYNT---GTYAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 P+ LA + AA++ AA A A + PTT+DA++IEGV D+E++A G AE+R+ + ++GE ++ N+EF +E +GG RL+ G DRF G L +++ ++ G + F ++G +PARG+A+R+EFLGK +++ FTTC+PG++DW +E +LDLDY T G R LRF D T+ P+ FPL+ R+SG LTP Y Q++ GLE+ +PYYWNIAPE+DAT TP Y+++RG QL+ RY+ P++ G EYLPDD GR R G+S+LH QNF PGL G+VD NKVSD RYFVDL S+V+Q S G + ++ ++ +Y T G Y QAR+QRFQTLQDPL+PIV PY R PQLN S N V G D LP EYVRF H TL+EG+R S PT+ AP ++PG++VTPKAGLRY+ Y L+ A G P +AVPW+SLDSGLVFER A++ G +QTLEPR +Y+ Y NQD++P+FDT +ADFN+ Q+ Sbjct: 25 PSRLATLAIALAAAITAAANALA-------QSDPTTVDAQKIEGVSDLEVSARGAAEIRRGELGVFGEYLRYNREFGELEGEGGVRLQSGVDRFFGPSLYYNTLDDTGFFESPGFLLQGERQPARGSADRVEFLGKSKYRLIRARFTTCKPGQDDWFLEASQLDLDYETDEGKARRPRLRFFDHTVLAFPYAAFPLENRRRSGLLTPYYSQTSTRGLELGIPYYWNIAPERDATFTPVYMARRGFQLKNHLRYMQPQHAGELRYEYLPDDPVFGRTRTGLSWLHTQNFAPGLTGQVDYNKVSDDRYFVDLASQVKQVSVGNLPQDAFITKYGTLGSGNYTGQARVQRFQTLQDPLAPIVPPYHRLPQLNASASYNDVAGKFDTALPGEYVRFVHPTLIEGSRASFAPTLAAPRISPGWYVTPKAGLRYSAYQLERSALGEPANPAVAVPWLSLDSGLVFERGARLFGEALTQTLEPRLFYVYVPYRNQDHIPLFDTTLADFNYPQL 523
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A1F4F5L4_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F5L4_9PROT) HSP 1 Score: 515 bits (1327), Expect = 2.770e-173 Identity = 255/497 (51.31%), Postives = 338/497 (68.01%), Query Frame = 1 Query: 88 ALSGAALAQAPA---QPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQYNTGT-----YAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 AL LA APA Q P +E PTTIDAERIEGV D+E+TA G AE+R+DD I+GE ++ N EF + +GG RL+ G DRF G RL + + ++ G + +F ++ D PARG AE LEF GKD +++++ SFTTC PG++DW +E E+DLDY + G +S LRF I P+ FPL+ R+SG LTP Y Q+T G EV +PYYWNIAPE+D T+TP ++KRG+QL+ ++RY+D Y G LEY+P+DK GR R G+S H Q F PGL G++D N+VSD RYFVDL S+VRQ S G +Q++GY+ Y GT Y+AQAR+Q+FQTLQDPL+PI PY R PQL F+T N + G+ D LP EYVRFTH +L+ G R S NPT+ P ++PG+FVTPK G+R +YSL+ T + +PW S D+GLVFER+A+ G +QTLEPR +Y+ Y NQD +P+FDT +ADFNF Q+ Sbjct: 6 ALLALLLAAAPAVAQQTPVEETSPTTIDAERIEGVSDLEVTARGNAEIRRDDVVIFGEVLRYNSEFGSAQGEGGVRLQLGVDRFFGPRLEYHTLDDTGVFESPSFVLQR-DVPARGEAEALEFRGKDRYRLKDASFTTCRPGQDDWILEASEIDLDYEAEEGEAKSPRLRFFGVPILGFPFASFPLENRRRSGLLTPYYSQTTNRGFEVGVPYYWNIAPERDLTMTPVLMTKRGLQLKNQFRYLDVPYAGELRLEYMPEDKEFGRRRTGVSLQHAQTFRPGLTGQIDFNRVSDDRYFVDLASQVRQVSIGNLQQDGYVTYQ-GTLGPLPYSAQARVQKFQTLQDPLAPITPPYHRQPQLTFATSMNDLAGLFDAALPAEYVRFTHRSLLYGARTSLNPTLAMPLISPGWFVTPKLGMRQLSYSLERTPPEQQTAPHVQIPWFSADTGLVFEREARFFGDTLTQTLEPRLFYVYVPYRNQDQIPLFDTALADFNFPQL 500
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Match: A0A536SU85_9PROT (LPS-assembly protein LptD n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SU85_9PROT) HSP 1 Score: 513 bits (1320), Expect = 1.320e-172 Identity = 252/499 (50.50%), Postives = 340/499 (68.14%), Query Frame = 1 Query: 70 FASWCAALSGAALAQAPAQPPPKEKGPTTIDAERIEGVMDIEITATGKAELRQDDTTIYGERIKMNQEFNRIEADGGARLEQGNDRFSGSRLRFDSANEAGTVDDATFNMRGGDRPARGTAERLEFLGKDHFKIRNGSFTTCEPGRNDWSVEGKELDLDYNTQVGTVRSGSLRFMDTTIAVLPWMDFPLDKGRKSGFLTPGYVQSTRSGLEVNMPYYWNIAPEQDATITPRYLSKRGMQLQGEYRYIDPRYTGIASLEYLPDDKRAGRNRYGMSFLHQQNFGPGLFGRVDLNKVSDSRYFVDLFSKVRQTSQGIMQREGYLQ----YNTGTYAAQARIQRFQTLQDPLSPIVSPYGRAPQLNFSTWKNQVGGVADVTLPIEYVRFTHSTLVEGTRISANPTITAPYLAPGYFVTPKAGLRYATYSLDGVAAGAPTRQTIAVPWVSLDSGLVFERDAKIAGRDFSQTLEPRAYYLRAGYHNQDNVPVFDTGIADFNFSQM 1554 FA+ AL+ A A A + PTT+DA++IEGV D+E++A G AE+++ D T++GE ++ N+EF +E GG RL+ G DRF G L +++ + G ++ F ++ DRPARG AER+EFLGK+ +++ FTTC+PG++DW +E ++DLDY+ G LRF D TI P+ FPL+ RKSG LTP Y Q++ GLE +PYYWNIAPE+DAT TP Y+++RG QL+ +RY++ Y G EYLP D GR R G+S+ H Q F PGL G+VD NKVSD RYFVDL S+V+Q S G + ++ Y+ +G+Y+AQ R+QRFQTLQDPL+PIV PY R PQLN S N + G D LP E+VRF H TLVEG+R S +PT+ AP +APG++VTPK GLRY+ Y LD A G P R A+PW+SLDSGLVFER+A+ G +QTLEPR +Y+ YHNQD++P+FDT +ADFN+ Q+ Sbjct: 5 FATLAVALAAAGSAAA-------QSDPTTVDAQKIEGVSDLEVSARGSAEIQRGDVTVFGEFLRYNREFGELEGQGGVRLQSGVDRFFGPSLEYNTLEDTGVIESPGFLLQR-DRPARGGAERMEFLGKNKYRLIAARFTTCQPGQDDWFLEASQIDLDYDADEGKASHPRLRFFDHTILAFPYASFPLENRRKSGLLTPYYSQTSTRGLEFGIPYYWNIAPERDATFTPVYMARRGFQLKNHFRYLERPYAGELRYEYLPHDPVFGRTRTGLSWQHTQTFRPGLTGQVDYNKVSDDRYFVDLASQVKQVSVGNLPQDEYITRTGTLGSGSYSAQVRVQRFQTLQDPLAPIVPPYHRVPQLNLSANHNDLAGRFDTALPGEFVRFVHPTLVEGSRASFSPTVAAPRIAPGWYVTPKTGLRYSGYQLDRQAEGEPQRPAFAIPWLSLDSGLVFERNARWFGNALTQTLEPRLFYVFVPYHNQDHIPLFDTTLADFNYPQL 495 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11589.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11589.1.1 >prot_P-wetherbeei_contig11589.1.1 ID=prot_P-wetherbeei_contig11589.1.1|Name=mRNA_P-wetherbeei_contig11589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=512bp MQLFTARAPALLAACFASWCAALSGAALAQAPAQPPPKEKGPTTIDAERIback to top mRNA from alignment at P-wetherbeei_contig11589:1..1560- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11589.1.1 ID=mRNA_P-wetherbeei_contig11589.1.1|Name=mRNA_P-wetherbeei_contig11589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1560bp|location=Sequence derived from alignment at P-wetherbeei_contig11589:1..1560- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11589:1..1560- >mRNA_P-wetherbeei_contig11589.1.1 ID=mRNA_P-wetherbeei_contig11589.1.1|Name=mRNA_P-wetherbeei_contig11589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1536bp|location=Sequence derived from alignment at P-wetherbeei_contig11589:1..1560- (Phaeothamnion wetherbeei SAG_119_79)back to top |