mRNA_P-wetherbeei_contig11556.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A7K0U1H6_9ACTN (Uncharacterized protein (Fragment) n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0U1H6_9ACTN) HSP 1 Score: 224 bits (572), Expect = 7.860e-61 Identity = 164/441 (37.19%), Postives = 224/441 (50.79%), Query Frame = 1 Query: 43 VAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGN---VTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYT-AINDGFG-RVGNPTVAGKPNLRWRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAVPRTLPPP--YPNGNGWTPYGSAVMGNAGTASNVNLTPLFDYWFRNSIAGG------LLLFKGDETAALYTVKKYSTTLSVTYNVPP 1326 VAAG V P G P AV+ FDA TS E R T++ N+DGS T+V S V+Y +G+W+ IDS LV G N ANSWSV F ++ DGV T R D + + + P + DGVSV+Y +V PGVDIVY V G VEE I ++ PDA VSS F++ ASG + G + V+ ET D G VD E + V G + VS+D W++ +DRFP+ IDP+ A T + PGQ A +D RVGNP + P +WR ++ +S + V+ A + TV G + GNR VYWA+E G+H R++P P +P G T + + + + GT V++T L +W +SIAG FKG E +YT K+ + +LSVTYN PP Sbjct: 63 VAAGVRVEPTPGAG-------APPAVSGGRFDAATSVEVVGERGERHTVFRNSDGSKTLVTSLVPVNYQ-VDGRWERIDSRLVADATG-FHNAANSWSVHFGSLASDGVRLTVGR-DSTGFTLSDAADSLPTVGADGVSVQYSNVLPGVDIVYRVSGDSVEEFISLSGPDA-VSSFRFKLLAGSGVFGDAASGFRVRKGGLSVRVSGLETTDRRGAFVDDEASSRLVPDSEGGGVLTVSVDSRWLRGLAADRFPVVIDPSFAPQAGTALEWLQYPGQATVPATSDSSHIRVGNPNITSNPTKKWRSVASFDLSSVVSRNVSKAELAITVTDGPS-GNRAVHVYWANEVGWHNGVPSRSVPAPGEWPWGLASTEFATGTLSSIGTTETVDVTSLVKFWAESSIAGAPSSADRSFFFKGYEPDGVYTYKRATLSLSVTYNSPP 491
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI001CA63A74 (LamG domain-containing protein n=1 Tax=Streptomyces sp. PLK6-54 TaxID=2873382 RepID=UPI001CA63A74) HSP 1 Score: 103 bits (257), Expect = 1.030e-19 Identity = 82/261 (31.42%), Postives = 117/261 (44.83%), Query Frame = 1 Query: 130 GFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVD---GVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIG----------DARVEQRSDASGLVISVGESKLYVAAPE--------TYDATGFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLT-GLATTVVTS 846 G+ A+TS D T+Y NADGSHT S DAV+Y D+ G WQPID+ L G DG++ RANS V F+ + D GV TT G + + + DG +V Y V PG D+V GV+E + + A ++ F + D +E R A + + + Y + + TY LVD G + V++D W+ P+ FP+T+DPT+T G TT S Sbjct: 103 GWSAKTSKRDAAHSGRTVTVYDNADGSHTRQVSLDAVNYQDAHGDWQPIDTRLSRGADGSLHERANSLGVVFAQRAADPRLGV-LTTGSGQSVGYALGGAAPVAGTLAADGAAVTYPGVLPGTDLVAAASPTGVKEAVVLHSAQAG-NTWTFPLSLKGLTPSLARDGSIELRDAAGRIAARIPRAYAYDSRVDRRSGDPTTTYAVHYALVDDHGTTA-------LKVTLDPSWL-HDPARVFPVTVDPTITDGWTTTYAES 353
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A8J3VF43_9ACTN (Uncharacterized protein n=2 Tax=Rhizocola hellebori TaxID=1392758 RepID=A0A8J3VF43_9ACTN) HSP 1 Score: 92.0 bits (227), Expect = 5.450e-16 Identity = 88/296 (29.73%), Postives = 123/296 (41.55%), Query Frame = 1 Query: 28 ETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTSTE-------------DPTG-----RSAFETLYINADGSHTVVASSDAVHYSDSEGQ-WQPIDSTLVVGD--DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIE----GHTAKPRIERDGVS-VRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQIA-----HDGT--VGVSIDRDWVKRQPSDRFPITIDPTL 816 + A PVA + RP G SP P LP P G A T DP R A +Y N DG+ TV+ ++ V++ G W+ ID+TLV DG IRN ANSW V F I G G W A E P I+ D + + Y DVWPGVD+VY+V V+E I + D S F + +E+R V + + E + G + D G ++ DG + +S+D+ W+ Q + P+ IDP+ Sbjct: 32 QAAKPVA---VARPLLGTSP---PVRLPEPSMPTGNAATEQTSQAAKPKRPVPREFDPAREIIRRRDAQTEVYANDDGTETVILHTEPVNFQPRPGAAWEKIDNTLVPDPQRDGWIRNLANSWKVEFGPIMSQGGGVELSAGTGKIWFAPELGDVHQMVLPVIDEDHPNRLVYSDVWPGVDVVYSVTSAQVKESIVVRS--GDRSDFPFAVSGLGLEERMLLPPRVTAASAGTWQLGPLEVTGSQGTVTDGSGVKARVETLDGRKDGRQRMTLSVDKAWLATQSGGKHPVVIDPSF 319
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI0017F2886C (Uncharacterized protein n=1 Tax=Saccharothrix sp. TaxID=1873460 RepID=UPI0017F2886C) HSP 1 Score: 90.9 bits (224), Expect = 1.300e-15 Identity = 84/265 (31.70%), Postives = 111/265 (41.89%), Query Frame = 1 Query: 67 PDAGESPTATPEELPRAVAPAGFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDG------------TIRNRANSWSVAFSDISVDGVSFTTDRGDV-LRWKAIEGHTAKPRIERDGVS--VRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEI-GDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQIAHDGTVGVSIDRD-WVKRQPSDRFPITIDP 810 P G P P E+ G D+R T + R+A T N DG+ T + D +G WQPI+ +LV DD R RAN WS F+ G +GD + + + +P I S VRY DVWPGVD+ Y V V+E I + RP A S+AF++ G V DA G + G S AP GF E V + DG V RD +++ P FP+ IDP Sbjct: 50 PQHGIDPVGAPREV------GGHDSREIT---SLRTASSTTRRNTDGTVTTRNFGSPQFFQDGQGVWQPINLSLVRDDDPHDAGVKAPESAVAFRTRANDWSARFAPTDFAGGMVRVGQGDTRIGFAPVGARAVEPSIVSTNGSQTVRYSDVWPGVDVEYAVTSYSVKENIVLKRPGAQ-DSVAFKVLGSTPVAD--DADGFALGGGFS----IAPPNIVLNGFGPVTEDGVVRQRLDGDRLVVAVRDGYLRSLPESAFPVVIDP 298
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A4R0HY56_9ACTN (DNRLRE domain-containing protein n=1 Tax=Kribbella sindirgiensis TaxID=1124744 RepID=A0A4R0HY56_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 1.700e-13 Identity = 92/325 (28.31%), Postives = 140/325 (43.08%), Query Frame = 1 Query: 7 AQALSRPETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTST--EDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGD-DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSS-LAFEIGDARVEQRSDASGLVISVG--------ESKLYVAAPETYDAT--------GFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQ--GYTAINDGFGRVGNPTV 915 A AL+ P+ VAA + R AG P + A A D + E R+A T Y +DG+ V S++ VHY D++G+WQ ID+ + G + + N N++ F S ++F D + A E P ++ SV + DV+ D+ Y V GV+E + +T DADV+ AFE+ + + ++ G S+G K + AP YD++ G+ VTQ + + D+ W+ + FPI IDPT+ VV PT Q + N G NPTV Sbjct: 24 ATALAHPQEVAQVAAPQVARAAAGPLAAPLPARVKNASTVATVDGTPARVRELEERRTASSTSYRMSDGTTQVELSTEPVHYKDTKGKWQDIDTKVTAGSGEDSFENAKNAFRTRFGKSSDRLLTFEADGESIGLGAAGEKRALTPVVKDS--SVAFPDVFGTADVRYYVSRTGVKETVVLTA-DADVAGEYAFELHTSGLTAKAQPDG---SIGFFKKNGDERPKYVIPAPNMYDSSATNQLGQPGYSDKITQTVTQQGGKTLLTLKPDQAWLAAKERV-FPIVIDPTI------VVVPDPTAAQDTSISEANAGVNYGTNPTV 335
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A7X5ZZV8_9ACTN (RHS repeat-associated protein n=2 Tax=Kribbella shirazensis TaxID=1105143 RepID=A0A7X5ZZV8_9ACTN) HSP 1 Score: 82.8 bits (203), Expect = 5.310e-13 Identity = 87/331 (26.28%), Postives = 143/331 (43.20%), Query Frame = 1 Query: 169 RSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGD-DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVG--------ESKLYVAAPETYDAT--------GFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVG---NPTVAGKPNLR---WRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAV 1092 R+A T Y +DG+ V S++ VHY DS+G+WQP+D+ + G + + N N++ F S ++F D GD + A A + +D SV + DV+ D+ Y V GV+E + +T P FE+ + + ++ G S+G K + AP YD++ G+ ++Q + + DR W+ + +PI IDPT+ VV P Q T+I++ G NP+V +L WRG + ++ + + ST SA N +Y + +Y SAV Sbjct: 133 RTASSTSYRMSDGTTQVELSTEPVHYKDSKGKWQPVDTKVTAGSGEDSFENAKNNFRTRFGKSSDRLLTFEAD-GDSIGLGAAGEKRALTALTKDS-SVAFPDVFGTADVRYYVSRTGVKETVVLTAPADAADEYTFELRTSGLTAKAQPDG---SIGFFKKNDDERPKYVIPAPNMYDSSTQNRLGQPGYSEKITQTISQQGGKTLLTLKPDRSWLAAKERV-YPIFIDPTI------VVVPDPAAAQD-TSISEANANTGYGTNPSVLVGDDLSHNTWRGLLKFDLSM----------IPSTTTIRSADLNVHYGAGFGGDYKLPLSAV 440
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A1H9V424_9PSEU (Intein C-terminal splicing region/RHS repeat-associated core domain-containing protein n=2 Tax=Lentzea flaviverrucosa TaxID=200379 RepID=A0A1H9V424_9PSEU) HSP 1 Score: 82.8 bits (203), Expect = 5.370e-13 Identity = 87/317 (27.44%), Postives = 136/317 (42.90%), Query Frame = 1 Query: 64 RPDAGESPTATPEELPRAVAPAGFD---ARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGH----------TAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQ------IAHDG--TVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVGN----------PTVAG 921 +P+ +P P AP+GF A S ED R A Y N DG+ T S A++Y S+G W+PID+ +V DG RN A+S F+ T +R + +GH AK R+E G + Y V D+ V GV+E + ++ DA + L F + ++ + +V+S G + P G + DA G+ + ++H+G + ++ D WV R + +FPI +DPT+TG V S T G+ A+ + G+ PT+AG Sbjct: 93 QPNFPAAPAPPPNAAHEVSAPSGFTGFKAGDSKEDAAKRDANSRTYRNPDGTQTTEYSQSALNYQRSDGSWEPIDTRIVPDGDG-YRNAADSVETRFNA--------TASESPFVRMRLPDGHEMSFGFAGTGAAKARVE--GSRITYPGVAAQTDLRLDVGPGGVKETLVLSSKDAATTWL-FPLQLKGLQAKISNGAVVLSDGSGAVKATIP-----AGDMTDAAGSASTAISYELVSHNGGQALKMTADAAWV-RDGARKFPIAVDPTVTGPRADVAIS--TNGRASEALTGSTLKSGDGYTTYLKFSLPTIAG 389
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI0018CE8517 (PA14 domain-containing protein n=1 Tax=Mesorhizobium sp. F7 TaxID=1574409 RepID=UPI0018CE8517) HSP 1 Score: 82.4 bits (202), Expect = 6.650e-13 Identity = 109/417 (26.14%), Postives = 174/417 (41.73%), Query Frame = 1 Query: 172 SAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVA-------FSDISVDG--VSFTTDRGDV--LRWKAIEGHTAKPRIE-----RDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDA-DVSSLAFEIGDARVEQRSDASGLVISV---GESKLYVAAPETYDATGF-------LVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVGNPTVAGKPNLRWRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAVPRTLPPPYPNGNGWTPYGSAVMGNAGTASNVNLTPLFDYWFRNSIAGGL----LLFKGDETAALYTVKKYSTTLSVTYNVPPS 1329 S F T Y +G V S + + D+ G+ +D + DGT WSVA F+D + DG V F+ DV A + P + RD VRY DV+P VD+ YTV G ++E +E++ P A +S + I + G ++ + GE + + +P +D+ G L + + ++ + ++ D +W+ P+ ++P+ +DPT+ T TS+ + DG VGN +G + WRG + ++S +V +AT+ T A+ TG RN V+ A GY R GS N T + + FD W + GG ++ G+E A YT K+ +T L V Y PS Sbjct: 108 SEFSTTYDQGNGVLAEVISQEQIRVEDASGEL--VDVSTSASFDGT------GWSVAPHPLSPRFADSAGDGPVVEFSAAGYDVDFTLINAADASIESPWLPWFQGPRD--VVRYPDVFPNVDLTYTVTGSTIKEYLELSAPPAAGENSWTWLIKANALSLEKTEQGDIVFLNRYGEVEFVIPSPVMWDSGGIDEQREPALTAVDTTLQEVPDGWQLTLTADPEWLS-SPARQYPVIVDPTVVDW-TINPTSYASYRDDGPTRTDGA-LVGNSRSSG--DSYWRGVASFTHSSPTTKQVIDATLRLTYANEGTTGTRNVRVFNATCSGYSCLGTFR---------------GSV---NIATGTVNFSSSSFDGWIASRFRGGSTTSSVILLGEEVAGAYTFKRLATQLVVQYKEFPS 491
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A1Q5AG32_9ACTN (TGFb_propeptide domain-containing protein n=2 Tax=Micromonospora sp. CB01531 TaxID=1718947 RepID=A0A1Q5AG32_9ACTN) HSP 1 Score: 82.4 bits (202), Expect = 7.030e-13 Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 154 EDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTL-VVGDDGTIR-NRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARV--EQRSDASGLVI--SVGESKLYVAAPETYDATGFLVDAEGNV---------TQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTL 816 E P R+A Y +DG S+ VHY D++G+WQ ID+T+ + G ++ NR N++S F D S D V F + + A + P++ G +V Y + G D+VY V ++E I + +P S F + A + +QR+D S + S GE + AP YD+ G V Q+ +V VS D W+ P+ +P+ IDPT+ Sbjct: 84 ELPGKRTANTKTYQLSDGRTQAEISAVPVHYRDTKGRWQAIDTTVRPTTEKGYVQSNRTNTFSSLFGDTSKDLVRFEAEGRSIELGMAGAAKSVTPKVS--GSTVTYAGIAGGADVVYDVTSTALKEEIVLRKPPVGPVSWTFTLDTAGLTAQQRTDGSIAFVRPSGGEPVFVMPAPFMYDSKDDKASPLGKVWSDKVTQRVQQVYGQTSVTVSADAAWLT-DPARVYPVVIDPTI 316
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A6I4MID3_9ACTN (DNRLRE domain-containing protein n=1 Tax=Actinomadura physcomitrii TaxID=2650748 RepID=A0A6I4MID3_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 9.350e-13 Identity = 73/245 (29.80%), Postives = 119/245 (48.57%), Query Frame = 1 Query: 130 GFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWK-AIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTV-RGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQ-------------IAHDGT--VGVSIDRDWVKRQPSDRFPITIDPT 813 GFD + S EDP+ R+ + Y N DG+ T ++ V+Y DS+G WQPIDS+LV +G RN+A+ V + + + G R+ ++G TA + + G ++ Y D+ P D++ V G V+E I + +A + F + + R A+G + V +SK VA + GF++D++ N DG + VS D+ W+ P+ +P+TIDPT Sbjct: 39 GFDPKRSVEDPSQRTRYGYRYKNPDGTWTARVNTRPVNYQDSDGSWQPIDSSLVREGNGRWRNKADQNRVDLAGRATGRDLAVLEMGTGKRFGFGVDGATAT-QAQAQGDTITYRDLRPDSDLLLQVLNGASVKEKIVLRTQNAP-AEWEFPLRTDGLTPRLAANGSIELV-DSKGEVAGRIPH---GFMIDSKVNARSGDPARSESVSYSLEKRDGAWALKVSADKTWLA-DPARVYPVTIDPT 276 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11556.1.1 >prot_P-wetherbeei_contig11556.1.1 ID=prot_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=449bp SEAQALSRPETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTSback to top mRNA from alignment at P-wetherbeei_contig11556:162..1508+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11556.1.1 ID=mRNA_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig11556:162..1508+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11556:162..1508+ >mRNA_P-wetherbeei_contig11556.1.1 ID=mRNA_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig11556:162..1508+ (Phaeothamnion wetherbeei SAG_119_79)back to top |