mRNA_P-wetherbeei_contig1148.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1148.2.1
Unique NamemRNA_P-wetherbeei_contig1148.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Match: A0A6H5JPM1_9PHAE (PfkB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM1_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 7.560e-56
Identity = 138/333 (41.44%), Postives = 182/333 (54.65%), Query Frame = 1
Query:   10 KGLQFSRVNRATATHTGIGGKGQNAAVAYQTAATDGGSK---------VRVLQFGMG----DVADTLLNIGIDVIAVPITANVRTCTTLIDERFMECTELIEPWSSDVSTAEAEALVTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSDSRA--SADSRVLVDSVSGVPDLLAGGAIGLLKVNAEELELLAAETDGEGDHDGDVN--ASVWLEERLAAAAARLFRCYE-TLPWIGVTNGALPAYLFRRGGSGAETRARIGAGTKTAAAVDAWRYLVPPLGDDFINAIGAGDAAAGVTLAKWVTGTPLPDAFRFGLAAAGAAC 954
            KGL+   VNRA++  +GIGGKGQN  VA +T A  GG           V +  F  G     V + L  +G+ +I     A +R CT+L+DERF E TE+IEPWS++++  E + L+  C + F E      + G+AVMGS P GV       ++  ++ S     A++RVLVDSV G   L+  G I LLKVNAEE+  LA E+  EGD         SVW+E++LA AAA LF  +E  LPWI VTNG LP+YLF R   G +            +    WR    P+  D +N IGAGDA A  TL +W  G  LP+AFR  L+  GA C
Sbjct:   67 KGLRVGDVNRASSVGSGIGGKGQNVCVALRTLAEGGGVADDGAQGDVDVTLAHFAGGKSGESVCENLSAMGVKLITSATEAEMRLCTSLVDERFGETTEIIEPWSAEITDEEQQVLLADCKSTFGE---VPCIHGVAVMGSNPVGVGKDALVDIMGAITKSAGFKGAETRVLVDSVVGFQALVDTGHISLLKVNAEEVVSLA-ESGREGDXXXXXXXXVSVWMEDKLAMAAAELFVRHEGRLPWIAVTNGGLPSYLFSREFLGED-----------GSLSSFWRVTPAPV--DAVNPIGAGDAVAAATLYEWTRGEELPEAFRRALSVGGATC 382          
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Match: A0A6U0RXL0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0RXL0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.960e-10
Identity = 93/332 (28.01%), Postives = 144/332 (43.37%), Query Frame = 1
Query:   16 LQFSRVNRATATHTGIGGKGQNAAVAYQTAATDGGSKVRVLQF-GMGDVADTLLNI--------GIDVIAVPITANVRTCTTLIDERFMECTELIEPWSSDVSTAEAEALVTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSDSRASADSR--VLVDSVSGVPDLL------------AGGAI--GLLKVNAEELELLAAETDGEGDHDGDVNASVWLEERLAAAAARLFRCYET---LPWIGVTNGALPAYLFRRGGSGAETRARIGAGTKTAAAVDAWRYLVPPLGD------------DFINAIGAGDAAAGVTLAKW 891
            L+   V+RA +   GIGGKGQ+ A+A    ++   S V + QF G G   D +L++        G D + V   A +RTCTT++       TEL+EP S  +S+ E + L+   ++          + G+ VMGS+P G    + A + + L       + +   LVDSV G+  LL             GG    G+ KVN  EL  LA      G   G+ N +   +E + +A     + Y+    L +I +T+G  PA+L +   + A   ++         +   W+  +  L D              +  IGAGD  A  TLA W
Sbjct:   79 LEPGSVHRAASLEEGIGGKGQDVAIALSCLSSAENSGVLLAQFLGKGAEGDQVLSMMSQRCKGSGND-LTVRTQAKLRTCTTIVASDV--ATELVEP-SGTISSDEIQDLLDRISSV--SKTQGLEIGGLCVMGSMPPGCQDDMYASIHSFLFPLDVDTEQQPLCLVDSVVGLKPLLHQMSSYRRSPSNQGGKRRGGMFKVNIAELCKLANIVKTSG---GEANCAT--KEEIVSAVEGFVQTYDAADALEYIAITDGKFPAHLVKLVDNNANDESK---------SFRLWQLKIASLADFISQRDGTDQSPTLLYPIGAGDTVAAGTLAAW 390          
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Match: A0A1S8W4K0_9FUNG (PfkB domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W4K0_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 8.180e-9
Identity = 99/387 (25.58%), Postives = 153/387 (39.53%), Query Frame = 1
Query:   19 QFSRVNRATATHTGIGGKGQNAAVAYQTAATDGGSKVRVLQFGMGDVADTLLNIGIDV-----IAVPITANVRTCTTLIDERFMECTELIEPWSSDVSTAEAEALVTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSDSRASADSRVLVDSVSGVPDLLAGGAIGLLKVNAEELELLAAETDGEGDHDGDVNASVWLEERLAAAAARLFRCYETLPWIGVTNGALPAYLFRRGGSGAETRARIGAGTKTAAAVDAWRYLVPPL------------------------------------------------------------GDDF----------INAIGAGDAAAGVTLAKWVTGTPLPDAFRFGLAAAGAAC 954
            QF +VNRA      +GGKGQN A+A        G K+ V+Q  +G +    +   +D      I++      RTCTT++DER  E T+LIEP ++ V + E++ L  +       S     ++ IA+ G++P    PGL   +   ++  +   +  +L+D+     + L  G + +LK+NAEE  LLA           DV+A       L     +L   Y+ +  I VTNG   AYLF          +R   G      V +  Y++PP+                                                            G D           IN +GAGD  + + + +++      DAFR GLAAA A+C
Sbjct:   87 QFGKVNRAFRKCNSVGGKGQNFAIACGLYGD--GDKLTVMQI-VGGMTGRYIQAFLDERKIQHISINTRKATRTCTTILDERTGEMTQLIEP-AARVDSTESKQLEQSIRYVIENS---PKIEAIALCGTLP----PGLTGYIYTLIAQLKPP-NVLLLLDAYQNT-ECLRTGHVDILKINAEEARLLALV---------DVDAD------LFETGKKLHEMYK-VTMIAVTNGPDQAYLFH-------VTSRSSDGAPLTLTVTS--YIIPPVLTVFSEMGDLESVCSSPRSRTLPEATGEPTGLHTALKTCHISGSSFTSYIENGDSMRSGNGSDMGTRDGYKDVVINPLGAGDTCSSIFVVEYLDTLDAADAFRHGLAAASASC 435          
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Match: A0A177WIN8_BATDL (PfkB domain-containing protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WIN8_BATDL)

HSP 1 Score: 67.0 bits (162), Expect = 9.370e-9
Identity = 78/242 (32.23%), Postives = 112/242 (46.28%), Query Frame = 1
Query:   19 QFSRVNRATATHTGIGGKGQNAAVAY-QTAATDGGSKVRVLQFGMGDVADTLLNI-----GIDVIAVPITANVRTCTTLIDERFMECTELIEPWSSDVSTAEAEALVTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSDSRASADSRVLVDSVSGVPDLLAGGAIGLLKVNAEELELLAAETDGEGDHDGDVNASVWLEERLAAAAARLFRCYETLPWIGVTNGALPAYLF 726
            QF +VNRA      +GGKGQN A+A  Q   +D   KV V+QF +G +    +        I  I++      RTCTT++DER  E T+LIEP ++ V  A++  L        + S     ++ IA+ G++P G+  G    L+A L          VL+      PD L  G + +LK+NAEE  LLA               S+  +  L     +L   Y  + +I VTNG   A LF
Sbjct:   20 QFGKVNRAFRKCNSVGGKGQNFAIACAQYGESD---KVSVIQF-VGGMTGRYIQAFQEENNISHISINTQKATRTCTTILDERTGEMTQLIEP-AARVEAAQSVQLEKLVRDVISNS---PKIEAIALCGTLPPGLT-GSTYTLIAQLKPPGV-----VLLLDAYQFPDCLLTGNVDILKINAEESRLLA---------------SMGEDADLIEVGKKLHSMYR-VRFIAVTNGPDQACLF 231          
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Match: A0A1E7FRX8_9STRA (PfkB domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRX8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 7.050e-8
Identity = 91/320 (28.44%), Postives = 144/320 (45.00%), Query Frame = 1
Query:   16 LQFSRVNRATATHTGIGGKGQNAAVAYQTAATDGGSKVRVLQF-GMGDVADTLLNIGIDVI---AVPIT----ANVRTCTTLIDERFMECTELIEPWSSDVSTAEAEAL----VTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSDSRASADSRVLVDSVSGV-PDLLAGGAIG------LLKVNAEELELLAAETDGEGDHDGDVNASVWLEERLAAAAARLFRCY------ETLPWIGVTNGALPAYLFRRGGSGAETRARIGAGTKTAAAVDAWRYLVPPLG-DDFINAIGAGDAAAGVTLAKWVT 897
            L    V+RA+  + G+GGKGQ+AA+A      +    +++LQF G G   D +  + +D +   A+ +T    + +RTCT+++     E TEL+EP S  +++ E E L    +++C    A S        + +MGS+P GV     AR+ + +        S  ++DS++G+ P LL    +G      LLK+NA EL  L   T   G   G +      +E + A    L + Y       TL  + +T+G   AY         E R               ++Y VP L     +  IGAGDA A   +A W +
Sbjct:   21 LMPGNVHRASTVNIGVGGKGQDAAIALHCLGLN--DAIKLLQFVGTGSTGDVVYKLLLDQLGESAMELTVRPSSEMRTCTSIVASD--ETTELVEP-SGIITSDEIEELFSNKLSSCVNNDARS--------LCIMGSMPPGVGNDTYARIYSKV----VGPSSICVIDSLAGIEPLLLKVSELGNNACPLLLKINASELCKLVG-TSKSGCETGGIKK----KELIDAIDMFLSKYYLTPTTINTLLGLAITDGKHAAYFVSFEKDQQEFRI--------------FKYSVPNLETSQTLYPIGAGDAVAAGVIAAWTS 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1148.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JPM1_9PHAE7.560e-5641.44PfkB domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6U0RXL0_9STRA5.960e-1028.01Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1S8W4K0_9FUNG8.180e-925.58PfkB domain-containing protein n=1 Tax=Batrachochy... [more]
A0A177WIN8_BATDL9.370e-932.23PfkB domain-containing protein n=1 Tax=Batrachochy... [more]
A0A1E7FRX8_9STRA7.050e-828.44PfkB domain-containing protein (Fragment) n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1148contigP-wetherbeei_contig1148:3..971 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2903.EOD11298
PFAMsPfkB
Model size969
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.22e-21
EggNOG OGsCOG1105@1|root,2S83D@2759|Eukaryota
Ec32 ortholog descriptiontagatose-6-phosphate kinase-like protein
Ec32 orthologEc-26_005350.1
DescriptionpfkB family carbohydrate kinase
Cds size969
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185913.160738-CDS-P-wetherbeei_contig1148:2..9711683185913.160738-CDS-P-wetherbeei_contig1148:2..971Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1148 3..971 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1148.2.1prot_P-wetherbeei_contig1148.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1148 3..971 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1148.2.1

>prot_P-wetherbeei_contig1148.2.1 ID=prot_P-wetherbeei_contig1148.2.1|Name=mRNA_P-wetherbeei_contig1148.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
SFAKGLQFSRVNRATATHTGIGGKGQNAAVAYQTAATDGGSKVRVLQFGM
GDVADTLLNIGIDVIAVPITANVRTCTTLIDERFMECTELIEPWSSDVST
AEAEALVTACTAAFAESAAAAAVDGIAVMGSVPAGVDPGLPARLLATLSD
SRASADSRVLVDSVSGVPDLLAGGAIGLLKVNAEELELLAAETDGEGDHD
GDVNASVWLEERLAAAAARLFRCYETLPWIGVTNGALPAYLFRRGGSGAE
TRARIGAGTKTAAAVDAWRYLVPPLGDDFINAIGAGDAAAGVTLAKWVTG
TPLPDAFRFGLAAAGAACCHSGG
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mRNA from alignment at P-wetherbeei_contig1148:3..971+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1148.2.1 ID=mRNA_P-wetherbeei_contig1148.2.1|Name=mRNA_P-wetherbeei_contig1148.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig1148:3..971+ (Phaeothamnion wetherbeei SAG_119_79)
TCGTTTGCAAAGGGCCTGCAGTTCTCGCGCGTGAATCGTGCGACTGCGAC CCACACGGGAATTGGAGGCAAAGGCCAGAACGCCGCTGTTGCCTACCAGA CCGCGGCTACCGACGGCGGTTCCAAAGTGCGCGTGCTGCAGTTTGGGATG GGCGATGTCGCTGACACTCTTCTAAACATCGGCATCGACGTCATTGCAGT TCCAATTACCGCCAATGTGCGGACCTGTACGACGCTAATCGACGAGCGTT TCATGGAATGTACAGAATTAATTGAACCTTGGAGCAGCGACGTATCAACG GCGGAGGCGGAGGCGCTCGTCACGGCCTGCACAGCCGCTTTTGCCGAGTC CGCCGCTGCAGCGGCAGTCGACGGCATTGCTGTCATGGGCAGCGTGCCCG CCGGCGTCGATCCCGGCCTGCCCGCCCGCCTCCTAGCCACGCTCTCCGAC TCACGAGCTTCTGCCGATAGTCGCGTCTTGGTGGACTCTGTATCCGGAGT GCCGGACCTCTTGGCGGGCGGCGCCATCGGCCTGCTCAAGGTGAACGCTG AGGAGCTGGAGCTGCTGGCTGCCGAGACAGACGGCGAGGGCGACCACGAC GGCGACGTCAACGCCTCGGTATGGCTCGAGGAGCGCCTGGCGGCGGCCGC TGCGCGCCTGTTTAGGTGCTACGAGACGCTACCGTGGATCGGTGTCACCA ATGGGGCGCTGCCGGCGTATCTGTTTCGCCGCGGCGGCAGCGGGGCCGAG ACAAGAGCGCGAATCGGAGCCGGAACCAAGACGGCCGCCGCCGTCGACGC GTGGCGGTACCTGGTGCCGCCGCTGGGGGATGATTTCATCAACGCAATTG GGGCCGGCGACGCCGCCGCTGGGGTGACGCTGGCGAAGTGGGTTACCGGG ACGCCGCTGCCGGACGCGTTTCGGTTTGGGCTGGCGGCGGCCGGCGCAGC ATGCTGCCACTCCGGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1148:3..971+

>mRNA_P-wetherbeei_contig1148.2.1 ID=mRNA_P-wetherbeei_contig1148.2.1|Name=mRNA_P-wetherbeei_contig1148.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig1148:3..971+ (Phaeothamnion wetherbeei SAG_119_79)
TCGTTTGCAAAGGGCCTGCAGTTCTCGCGCGTGAATCGTGCGACTGCGAC
CCACACGGGAATTGGAGGCAAAGGCCAGAACGCCGCTGTTGCCTACCAGA
CCGCGGCTACCGACGGCGGTTCCAAAGTGCGCGTGCTGCAGTTTGGGATG
GGCGATGTCGCTGACACTCTTCTAAACATCGGCATCGACGTCATTGCAGT
TCCAATTACCGCCAATGTGCGGACCTGTACGACGCTAATCGACGAGCGTT
TCATGGAATGTACAGAATTAATTGAACCTTGGAGCAGCGACGTATCAACG
GCGGAGGCGGAGGCGCTCGTCACGGCCTGCACAGCCGCTTTTGCCGAGTC
CGCCGCTGCAGCGGCAGTCGACGGCATTGCTGTCATGGGCAGCGTGCCCG
CCGGCGTCGATCCCGGCCTGCCCGCCCGCCTCCTAGCCACGCTCTCCGAC
TCACGAGCTTCTGCCGATAGTCGCGTCTTGGTGGACTCTGTATCCGGAGT
GCCGGACCTCTTGGCGGGCGGCGCCATCGGCCTGCTCAAGGTGAACGCTG
AGGAGCTGGAGCTGCTGGCTGCCGAGACAGACGGCGAGGGCGACCACGAC
GGCGACGTCAACGCCTCGGTATGGCTCGAGGAGCGCCTGGCGGCGGCCGC
TGCGCGCCTGTTTAGGTGCTACGAGACGCTACCGTGGATCGGTGTCACCA
ATGGGGCGCTGCCGGCGTATCTGTTTCGCCGCGGCGGCAGCGGGGCCGAG
ACAAGAGCGCGAATCGGAGCCGGAACCAAGACGGCCGCCGCCGTCGACGC
GTGGCGGTACCTGGTGCCGCCGCTGGGGGATGATTTCATCAACGCAATTG
GGGCCGGCGACGCCGCCGCTGGGGTGACGCTGGCGAAGTGGGTTACCGGG
ACGCCGCTGCCGGACGCGTTTCGGTTTGGGCTGGCGGCGGCCGGCGCAGC
ATGCTGCCACTCCGGCGGC
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