mRNA_P-wetherbeei_contig11451.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY) HSP 1 Score: 198 bits (503), Expect = 6.810e-53 Identity = 129/401 (32.17%), Postives = 197/401 (49.13%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQDLMAGR----------------------------------------------------PLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPL 1047 R++ARLV +G+SQR G+DY F+PV+ S+R +L L A + E+ Q+DV TA G + + +F+ P +G+++ + ++ DD+L + N K+ + + F MKDLG +LG+ +R+D A + P VG ++Y V TRPD+ V + +PRR W+ RYLKGT E G+L+S R P + +G DAD+A ++D RRS YVF SG + W+S +Q A ST EAEY+A A A + ALWL+ L LGL+ +H ++Q +A N + R HID++FH +RE + +G+I+L T + AD+LTKP+ Sbjct: 755 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLTLVANQDLELEQLDVKTAFLHGNLEEE--IFME---QPEGFKQPDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFS-----RQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAIAEAAKEALWLKGLVKELGLNQGG-VQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPV 1144
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A6S7IYL0_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IYL0_PARCT) HSP 1 Score: 189 bits (480), Expect = 5.210e-52 Identity = 135/395 (34.18%), Postives = 193/395 (48.86%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCVFVRGDASPVAA---AAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQD---LMAGRPL------------------------------------------RDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTK 1041 R++ARLV Q FSQR G+DY TF+PV+ S+R ++AL+ + ++HQ+DV TA L D + + V + +G V IH DD++ G K SI+ RF +KD+G + +LG+ V Q+ + G+P + V ++LYL+ TRPDI V + +P + RYLKGT GLLYS + + +G +DADWA DL+ R+S Y F +GAAVSWRSK + C A ST EAEYVA + A Q ALW+ L L +++ P I+E NQ ++ NL R HIDI++H VR++VE + ++ T LADL TK Sbjct: 105 RHKARLVAQCFSQRYGVDYDETFSPVVRFESIRTVIALSVQKGLKLHQVDV-TAAFLNGELEDEVYVKQSEGLEVKGKQTSEEDGDIFIVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELQYILGLQVIQEDGKVWIGQPTYTASIIKKYDMENCKPVETHVNLSSKLVSAMEDSELFNKEEYQSAVVSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENASPDC------VGFSDADWAGDLNDRKSTSGYRFQINGAAVSWRSKKKTCVALSTAEAEYVAFSAAAQEALWMGQLLTDLNVNIDEPVTIYEGNQSAIAMSKNLQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTK 492
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A060SR77_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SR77_PYCCI) HSP 1 Score: 193 bits (490), Expect = 6.430e-52 Identity = 142/452 (31.42%), Postives = 199/452 (44.03%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTA-------------------DGLGAV---------------------------------YADCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQDLMAGR--------------------------PL---------------------RDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPLPAPR 1059 +++ARLV QGFSQ PG+DY TFAPV S+R LLAL LN ++ +D+V A DG V +D CV+VR AS + VG+H DD+++ +S F + LG ++G+ V +D AG PL + +VG+++Y A+ TRPDI V+ L +P + A +LRYLKGTR G++Y + P IG +DADWA DLD R+S+ VFL GA ++W S+ Q A S+ EAEY+AA+ A WL+ L LG + PTP++ +NQ A S R HIDI +H +RER+ S E+++ ++D LAD LTK LP PR Sbjct: 297 KHKARLVAQGFSQIPGVDYIETFAPVARLESLRTLLALGTILNLDIQVVDIVGAYLNGRLREEIYMRQPPMYEDGTSNVCRLHLTLYGLKQSGREWNHELDDKFAKLGFTRLVSDLCVYVRRAASKI---------WMVGVHVDDMITLANTPDDNKALHDELSNYFEITRLGDARQIVGLEVTRDRNAGTLALRQSQYIDRILARFGMTDANPVDTPLDANAGRRCHNGPEDPDARMLYQAMVGSLMYAALGTRPDIAHAVQQLSQYASNPGPAHIMAAKRVLRYLKGTRMLGIIYCANATTDSDHPLEPIGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAASAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANAQTSHARTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADALTKALPRPR 739
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 191 bits (485), Expect = 1.900e-50 Identity = 139/447 (31.10%), Postives = 205/447 (45.86%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTA--------------------------------------------------DGLGAV--YADCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQDL---------------------MAG------------------------RPLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPLP 1050 +Y+ARLV +GF+Q G+D+ TFAPV AS+R LLALAA+L+ E+HQMDV +A + LG ++D VF + D +G L + I+ DD+L L+A K + RF M DLG LLG+ + +D MA +P + ++G+++Y + TRPD+ V AL P + + + RYL+GT +K L+Y +T + P +G DADWA +++ RRSV +VFL S AVSW SK Q TA S+ EAEY+A A+ + A+WL+ +G PTP+ +NQ ++ N R HI +++H +RE+ +SGEI T +Q+AD+LTK LP Sbjct: 988 KYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKND---------DGILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEAEIDPKPYQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVYCGTTKEKEPL----LGYVDADWAANVNDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLP 1421
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A5D3DF53_CUCME (Putative copia-type polyprotein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DF53_CUCME) HSP 1 Score: 184 bits (468), Expect = 2.390e-50 Identity = 140/439 (31.89%), Postives = 201/439 (45.79%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCV------FVRGDASPVAAAA----------------------------------------GNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQ--------------------DLMAGRPL------------------------RDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPL 1047 RY+ARLV +G+SQR G+DY FAPV ++R L+ALAA+ N+++ QMDV +A G + + + V+G V G+G L V ++ DDL+ TG S D K ++++ F M D+G + LGI V+Q ++M +P+ + LVG++ YL T RPDI V + P A +LRYL+GT + GL YS S ++ G D+DWA D + R+S YVF A +W SK Q STCEAEYVAAA V HA+WL+ L +G+ PT IH +N+ +A N + R HID +FH +R+ + E+ + KT+DQ+AD+LTKPL Sbjct: 44 RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGISISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEKGDDVDPSYFKSLVGSLRYLTCT-RPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLE------GYCDSDWAGDTNYRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHVDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADILTKPL 475
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A2N9I807_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I807_FAGSY) HSP 1 Score: 190 bits (483), Expect = 3.390e-50 Identity = 129/382 (33.77%), Postives = 190/382 (49.74%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQD-----------LMAGR-------------------PLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPLPAP 1056 R++ARLV +G+SQR G+DY F+PV+ S+R +LAL A+ + E+ Q+DV TA G + + +F+ P L + +P K+ + + F MKDLG +LG+ + +D +GR P VG ++Y V TRPD+ V + +P R W+ RYLKGT E G+L+S R P + +G DAD+A ++D RRS YVF SG + W+S +Q A ST EAEY+A A A + ALWL+ L LGL+ +H ++Q +A N + R HID++FH +RE + +G+I+L T + AD+LTKPLP P Sbjct: 800 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEE--IFME---QPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIHRDRGQESYGCLRKTTSGRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFS-----RQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLNQGG-VQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPLPQP 1170
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 189 bits (479), Expect = 1.050e-49 Identity = 138/447 (30.87%), Postives = 205/447 (45.86%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTA--------------------------------------------------DGLGAV--YADCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQDL---------------------MAG------------------------RPLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPLP 1050 +Y+ARLV +GF+Q G+D+ TFAPV AS+R LLALAA+L+ E+HQMDV +A + LG ++D VF + D +G L + I+ DD+L L+A K + RF M DLG LLG+ + +D MA +P + +G+++Y + TRPD+ V AL P + + + + RYL+GT +K L+Y +T + P + DADWA ++++RRSV +VFL S AVSW SK Q TA S+ EAEY+A A+ + A+WL+ +G PTP+ +NQ ++ N R HI +++H +RE+ +SGEI T +Q+AD+LTK LP Sbjct: 665 KYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKND---------DGILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPKPYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPL----LRYVDADWAANVNNRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLP 1098
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A2N9FV67_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FV67_FAGSY) HSP 1 Score: 188 bits (478), Expect = 1.510e-49 Identity = 134/455 (29.45%), Postives = 203/455 (44.62%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLG----------------------------AVYA--------------------------DCCVFVRGDASPVAAAAGNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQDLMAGR----------------------------------------------------PLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPL 1047 R++ARLV +G+SQR G+DY F+PV+ S+R +LAL A+ + E+ Q+DV TA G ++Y DCCV+VR +G+++ + ++ DD+L + N K+ + + F MKDLG +LG+ +R+D A + P +VG ++Y V TRPD+ V + +P R W+ RYLKGT E G+L+S R P + +G DAD+A ++D RRS YVF SG + W+S +Q A ST EAEY+A A A + ALWL+ L LGL+ +H ++Q +A N + R HID++FH +RE + +G+I+L T + AD+LTKP+ Sbjct: 764 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVR--------ILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASVVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFS-----RQPRTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLNQGG-VQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPV 1204
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.520e-49 Identity = 134/402 (33.33%), Postives = 198/402 (49.25%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAV----YADCCVFVRGDASPVAAAAG--NGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQD----------------------------------------------LMAGRPLRDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQL-ADLLTKPL 1047 +++ARLV +GF+QRPG+DY TFAPV S+ + A+AAE + E +DV TA G V Y D + + +A N T+ V ++ DDL+ + K ++ F++K+LG + LGI + + +A P R+LVGA++YLA +TRPDI V + C + + A +L+YLK T++ GL+++ + +G ADA+WA DLD+RRS YVF +G+A+SW+SK Q A S+ EAEY+A A+Q A+WL+ L LG T I++ENQ C +A N R HIDI+FH + E+VES + L T + + AD TK L Sbjct: 560 KFKARLVAKGFTQRPGIDYTETFAPVARKESINAVAAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFADQPTRIRSACWDKNSTYSIVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREKMIVMNQRAYIKRLAEKSGVDKCKDIYTPADSSAKLMKSSEDEYFVAKYPYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGEL------VGYADANWAGDLDTRRSTTGYVFFFNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGTTTIYQENQGCIALAKNPAYHTRTKHIDIKFHFLHEKVESKTVELEYKPTDEMMIADGFTKAL 955
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Match: A0A5A7V277_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7V277_CUCME) HSP 1 Score: 188 bits (477), Expect = 2.120e-49 Identity = 140/439 (31.89%), Postives = 202/439 (46.01%), Query Frame = 1 Query: 1 RYRARLVTQGFSQRPGMDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCV------FVRGDASPVAAAA----------------------------------------GNGTFLAVGIHADDLLSTGAPLSATNDFKTSISRRFAMKDLGRIHTLLGILVRQ--------------------DLMAGRPL------------------------RDLVGAVLYLAVTTRPDIFDQVRALM*CCHDPRRPDGLTALWLLRYLKGTREKGLLYSWSTAARVPTPGAAIGDADADWAQDLDSRRSVGAYVFLRSGAAVSWRSKMQDCTAASTCEAEYVAAAYAVQHALWLQWLAWGLGLSMTAPTPIHEENQPCSDIATNLISERRVNHIDIQFHIVRERVESGEIILVPTKTKDQLADLLTKPL 1047 RY+ARLV +G+SQR G+DY FAPV ++R L+ALAA+ N+++ QMDV +A G + + + V+G V G+G L V ++ DDL+ TG +S D K ++++ F M D+G + LGI V+Q ++M +P+ + LVG++ YL T RPDI V + P A +LRYL+GT + GL YS S ++ G D+DWA D + R+S YVF A +W SK Q STCEAEYVAAA V HA+WL+ L +G+ PT IH +N+ +A NL+ R HID +FH +R+ + E+ + KT+DQ+AD+ TKPL Sbjct: 910 RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCVSMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYIREVLEKFNMMNSKPIATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCT-RPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLE------GYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHVDNKSAIALAKNLVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPL 1341 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11451.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11451.2.1 >prot_P-wetherbeei_contig11451.2.1 ID=prot_P-wetherbeei_contig11451.2.1|Name=mRNA_P-wetherbeei_contig11451.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp MDYGATFAPVMSAASMRYLLALAAELNFEVHQMDVVTADGLGAVYADCCVback to top mRNA from alignment at P-wetherbeei_contig11451:374..1749+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11451.2.1 ID=mRNA_P-wetherbeei_contig11451.2.1|Name=mRNA_P-wetherbeei_contig11451.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1376bp|location=Sequence derived from alignment at P-wetherbeei_contig11451:374..1749+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11451:374..1749+ >mRNA_P-wetherbeei_contig11451.2.1 ID=mRNA_P-wetherbeei_contig11451.2.1|Name=mRNA_P-wetherbeei_contig11451.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig11451:374..1749+ (Phaeothamnion wetherbeei SAG_119_79)back to top |