prot_P-wetherbeei_contig11208.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11208.1.1
Unique Nameprot_P-wetherbeei_contig11208.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length81
Homology
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: D8LBA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA5_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.170e-23
Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    1 AVAAPPVPAQASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            AV A P PA A+      L HLVID+ AIIKGAGMTLA  AE FWT+PEV+ E+RDKKAR HL++LPFEL+LREPSDEA++
Sbjct:   60 AVGAGPSPAPAAGD--QKLTHLVIDSGAIIKGAGMTLASAAENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMK 138          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A6H5KFQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ3_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 6.630e-23
Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 0
Query:   19 LKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            L HLVID+ AIIKGAGMTLA  AE FWT+PEV+ E+RDKKAR HL++LPFEL+LREPSDEA++
Sbjct:   76 LTHLVIDSGAIIKGAGMTLASAAENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMK 138          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A835YK00_9STRA (Putative RNA binding protein NOB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK00_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.380e-19
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    9 AQASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEAL 80
            AQASP   + LKHLVID+ A+I G+   L   AE+FWTVP VL E+RDKKARH LDTLP+EL+LREPS+EAL
Sbjct:   21 AQASPP--SQLKHLVIDSGAVITGSAAGLVYSAEQFWTVPAVLAEIRDKKARHLLDTLPYELKLREPSEEAL 90          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A4D9CQR9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQR9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.630e-19
Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    6 PVPAQASPQPLNP------LKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            PV   ASP P  P       +HLV+DT AIIKG G +LA  AE FWT+PEV+ EVRD +AR HLD+LPFEL+ REPS EA +
Sbjct:   38 PVEMSASPTPQTPPGVRSKSRHLVLDTGAIIKGQGYSLARLAEHFWTIPEVIAEVRDPRARLHLDSLPFELRTREPSSEACK 119          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A484E6S8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6S8_BRELC)

HSP 1 Score: 78.6 bits (192), Expect = 3.290e-15
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    6 PVPAQASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            P+P   +P+    + HLVID+ AIIKG    LAG AE FWTVP+VL E+RDKK+R  L+ LPF L  REPS EA++
Sbjct:   40 PMPQLLTPEKAKKVLHLVIDSGAIIKGTN--LAGLAENFWTVPDVLNEIRDKKSRGILERLPFSLHTREPSAEAMK 113          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: F0YA89_AURAN (HTH La-type RNA-binding domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA89_AURAN)

HSP 1 Score: 76.6 bits (187), Expect = 1.640e-14
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   20 KHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEA 79
            KHLV+D  A+I+G   +LAG+AERFWT+ EVL EVRD K+R  L  LPFEL++R PS EA
Sbjct:   98 KHLVLDANALIRGRAASLAGYAERFWTIEEVLAEVRDDKSREQLLRLPFELEVRRPSAEA 157          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A8K1FH82_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH82_PYTOL)

HSP 1 Score: 74.7 bits (182), Expect = 7.410e-14
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    6 PVPAQASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            P PA AS +    + HLV+D+ AIIKG    LA  AE FWTVP+V+ E+RDK+AR  LD LPF LQ REPS EA++
Sbjct:   20 PTPAAASAK--KKVLHLVVDSGAIIKGTN--LAPLAENFWTVPDVVAEIRDKRARAILDALPFTLQTREPSAEAMK 91          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A080ZFK0_PHYPR (C3H1-type domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZFK0_PHYPR)

HSP 1 Score: 73.2 bits (178), Expect = 9.400e-14
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   21 HLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            HLVID+ AIIKG  + +   AE FWTVP+VL E+RDKK+R  L+ LPF LQ REPS EA++
Sbjct:   54 HLVIDSGAIIKGTNLAVL--AENFWTVPDVLDEIRDKKSRAILERLPFTLQTREPSAEAMK 112          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A0N7L7S3_PLAHL (Rna-binding protein nob1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7S3_PLAHL)

HSP 1 Score: 73.9 bits (180), Expect = 1.390e-13
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   10 QASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            ++SP     + HLVID+ AIIKG  + +   AE FWTVP+VL E+RDKK+R  L+ LPF LQ REPS  A++
Sbjct:   43 KSSPATTKKVLHLVIDSGAIIKGTNLVIL--AENFWTVPDVLDEIRDKKSRAFLERLPFTLQTREPSAAAMK 112          
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Match: A0A421H299_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H299_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.400e-13
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   10 QASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEVLQEVRDKKARHHLDTLPFELQLREPSDEALR 81
            Q +P+    + HLVID+ AIIKG  + +   AE FWTVP+VL E+RDKK+R  L+ LPF LQ REPS EA++
Sbjct:   49 QEAPKSNKKVLHLVIDSGAIIKGTNLGVL--AENFWTVPDVLNEIRDKKSRAVLERLPFTLQTREPSAEAMK 118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11208.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA5_ECTSI3.170e-2366.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFQ3_9PHAE6.630e-2374.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YK00_9STRA1.380e-1966.67Putative RNA binding protein NOB1 n=1 Tax=Tribonem... [more]
A0A4D9CQR9_9STRA5.630e-1958.54Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A484E6S8_BRELC3.290e-1555.26Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
F0YA89_AURAN1.640e-1461.67HTH La-type RNA-binding domain-containing protein ... [more]
A0A8K1FH82_PYTOL7.410e-1456.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A080ZFK0_PHYPR9.400e-1460.66C3H1-type domain-containing protein n=1 Tax=Phytop... [more]
A0A0N7L7S3_PLAHL1.390e-1352.78Rna-binding protein nob1 n=1 Tax=Plasmopara halste... [more]
A0A421H299_9STRA1.400e-1354.17Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 16..81
e-value: 3.7E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR12814:SF2RNA-BINDING PROTEIN NOB1coord: 17..81
IPR033411Ribonuclease, PIN domainPFAMPF17146PIN_6coord: 22..80
e-value: 6.5E-16
score: 58.6
IPR039907RNA-binding protein NOB1PANTHERPTHR12814RNA-BINDING PROTEIN NOB1coord: 17..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11208contigP-wetherbeei_contig11208:230..472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11208.1.1mRNA_P-wetherbeei_contig11208.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11208 230..472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11208.1.1 ID=prot_P-wetherbeei_contig11208.1.1|Name=mRNA_P-wetherbeei_contig11208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
AVAAPPVPAQASPQPLNPLKHLVIDTAAIIKGAGMTLAGHAERFWTVPEV
LQEVRDKKARHHLDTLPFELQLREPSDEALR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033411Ribonuclease_PIN
IPR039907NOB1