mRNA_P-wetherbeei_contig11206.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11206.2.1
Unique NamemRNA_P-wetherbeei_contig11206.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A1Y2R5S5_9BURK (Acyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R5S5_9BURK)

HSP 1 Score: 714 bits (1842), Expect = 8.820e-259
Identity = 353/390 (90.51%), Postives = 373/390 (95.64%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            MDF+LTPEQE FR EVRAFIR+RLP+DIR+RLAMGHPARK+DVVRFQRIL+ERGWAAPHWPK +GGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLL+FGT +Q+DHFLP+LASGELWFCQGFSEPGSGSDLASLRTSA REG+EY+VNGQKIWTSSAHQADWVF LVRTEQA RKQDGI+FLL+DMR+PGITVRPIVSID+AHHLNEVFFDNVR PVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDF RAL  +LTQ GRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAP TALAGPSFASVLKLKGTE+QQDLVALIAR+GGPTALERRP EGEGSEHWAAPG  RY QSRAASIYGGSSEIQKDILAKAALG
Sbjct:    1 MDFRLTPEQETFRDEVRAFIRERLPQDIRERLAMGHPARKDDVVRFQRILHERGWAAPHWPKAFGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLKFGTARQQDHFLPRLASGELWFCQGFSEPGSGSDLASLRTSAVREGDEYVVNGQKIWTSSAHQADWVFALVRTEQAPRKQDGISFLLIDMRTPGITVRPIVSIDHAHHLNEVFFDNVRVPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFARALAGKLTQAGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPQTALAGPSFASVLKLKGTELQQDLVALIARLGGPTALERRPGEGEGSEHWAAPGNLRYLQSRAASIYGGSSEIQKDILAKAALG 390          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A6P2EZ80_9BURK (Glutaryl-CoA dehydrogenase n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EZ80_9BURK)

HSP 1 Score: 631 bits (1628), Expect = 3.500e-226
Identity = 305/390 (78.21%), Postives = 347/390 (88.97%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            MDF LTP Q AFR +VRAFI++RLP+DIR+R+  GHPARK+DVV FQRILNERGWAAPHWP++YGGA+LGQ ERLIL +E+ RAPAPMPSIFNVVMLGPLL++FGT +Q DHFLPKLA+ +LWFCQGFSEPG+GSDLA+LRTSARREG+ Y+VNGQKIWTS+AH ADW FCLVRT QAARKQDGI+FLL+D+R PGI +RPIVSID AH LNEVFFD V+ PVE+LVGEEGRGWDCAKFLLGNERTGIANV  CRERLDF R L R LTQ GRPL +DA L+AELA LDAE+RALE+TNWR+LLAP T+L G +FASVLKLKGTEIQQ++VAL+AR+ GP ALERR ++  GSEHWAAP APRY QSRAASIYGG+SEIQKDILAKAALG
Sbjct:    1 MDFALTPAQAAFRNDVRAFIQERLPQDIRKRMRAGHPARKQDVVLFQRILNERGWAAPHWPRKYGGAELGQVERLILVDELFRAPAPMPSIFNVVMLGPLLMKFGTPEQCDHFLPKLANLDLWFCQGFSEPGAGSDLAALRTSARREGDHYVVNGQKIWTSTAHYADWAFCLVRTGQAARKQDGISFLLVDLRLPGIRIRPIVSIDGAHSLNEVFFDEVKVPVEHLVGEEGRGWDCAKFLLGNERTGIANVGLCRERLDFARELARTLTQNGRPLIDDAGLRAELAVLDAEIRALEITNWRLLLAPETSLGGAAFASVLKLKGTEIQQEVVALVARLAGPAALERRASDSAGSEHWAAPLAPRYLQSRAASIYGGASEIQKDILAKAALG 390          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: UPI001575692B (acyl-CoA dehydrogenase family protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI001575692B)

HSP 1 Score: 617 bits (1590), Expect = 2.130e-220
Identity = 297/390 (76.15%), Postives = 336/390 (86.15%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            M+  LTP Q AFR EVRAFI  RLP++IR R+  GHPARKED+V FQR LNERGWAAPHWPK+YGGA+LGQ ER+IL +E+ RAPAP+PS+FNV+MLGPLL+RFGT  Q DHFLPKLA+ +LWFCQGFSEPG+GSDLASLRT+ARR+G+ Y+VNGQKIWTS+AH ADW FCLVRTEQAARKQDGI+FLL+DMR+PGITVRPI+SID +H LNEVFFD VR PV NLVGEEGRGW+CAKFLLGNERTGIANV  CRERL + R L R LTQ GRPL ED  LQ+ELA LDAE+RALEVTNWR+L+AP T LAG +FASVLKLKGTE+QQD+ AL+AR+ GP ALERRP EGE   HWAAP  PRY  SRAASIYGG+SEIQKDILAKA LG
Sbjct:    1 MNLALTPAQAAFRDEVRAFIDARLPDEIRSRMRAGHPARKEDIVLFQRALNERGWAAPHWPKRYGGAELGQVERMILIDELYRAPAPLPSVFNVIMLGPLLMRFGTPAQCDHFLPKLANLDLWFCQGFSEPGAGSDLASLRTAARRDGDHYVVNGQKIWTSTAHVADWAFCLVRTEQAARKQDGISFLLVDMRTPGITVRPIISIDGSHILNEVFFDEVRVPVGNLVGEEGRGWECAKFLLGNERTGIANVGLCRERLGYARELARSLTQAGRPLIEDTGLQSELALLDAEIRALEVTNWRLLMAPETGLAGQAFASVLKLKGTEVQQDVAALLARLAGPAALERRPAEGEAGMHWAAPLMPRYLHSRAASIYGGTSEIQKDILAKAILG 390          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A679J9D1_VARPD (Acyl-CoA dehydrogenase n=4 Tax=Variovorax TaxID=34072 RepID=A0A679J9D1_VARPD)

HSP 1 Score: 574 bits (1479), Expect = 1.680e-203
Identity = 274/390 (70.26%), Postives = 325/390 (83.33%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            M+ + T  Q AFR EVR F+++RLP DIR+RL +GHP RK+D V +QRIL+E+GWAAPHWP++YGGA+LGQAERLIL +E+ RAPAP+P +FNV MLGP+LL+FGT+ Q+ HFLPKLA+ +LWFCQGFSEPGSGSDLASLRTSARREGN+YIVNGQKIWT++AH ADWVF LVRT+   RKQ GI+FLL+D+R+PGIT+RPI SID  HHLNEVFFD VR P  NLVG+EGRGWDCAK+LL NERTGIANV  CRERLD+ R L  +LT+ GRPL E   L+AE+A L+AEVRALEVTNWR LL+  TA   P FASVLKLKGTE+QQD+  L+ R+ GP A+ERRP +GEG+ HWA P A RYF SRAASIYGG+SE+QKDILAK  LG
Sbjct:    1 MNLEPTASQAAFRAEVRRFVKERLPTDIRERLRLGHPPRKQDTVAWQRILHEKGWAAPHWPREYGGAELGQAERLILLDEMFRAPAPLPQVFNVGMLGPVLLKFGTEAQKRHFLPKLANLDLWFCQGFSEPGSGSDLASLRTSARREGNDYIVNGQKIWTTTAHLADWVFALVRTDGEGRKQHGISFLLIDLRTPGITIRPITSIDGQHHLNEVFFDEVRVPAGNLVGDEGRGWDCAKYLLMNERTGIANVGLCRERLDYARELAGRLTEAGRPLLESPKLRAEIATLEAEVRALEVTNWRFLLSTDTAQKNPGFASVLKLKGTELQQDIAQLLQRIAGPAAMERRPHDGEGAGHWAGPLAMRYFYSRAASIYGGTSEVQKDILAKTILG 390          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: UPI0019B1E882 (Acyl-CoA dehydrogenase family protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019B1E882)

HSP 1 Score: 562 bits (1448), Expect = 9.730e-199
Identity = 269/389 (69.15%), Postives = 322/389 (82.78%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAAL 1167
            MD  LTPEQ AFR EVR F+R RLP+DIRQRL +GHP RKED VR+QRIL+ERGWAAPHWP+ +GG+D+G  ERLIL +E+ RAPAP+P +FNV MLGP+L++FGT +Q+D FLP+LA  ++WFCQGFSEPGSGSDLASLRT+ARR+G+EYIVNGQKIWT++AH ADWVF LVRT+  A+KQ+GI+F+L+D+R+PGIT+RPI SID  HHLNEVFFD+VR PV  LVGEEG GWDCAKFLL NERTGIANV  CRERLD+   L  ++T+GG+P+ ++A L+AE+A L AEVRALE+TNWR LL P TA   P FASVLKLKG E+QQ L  L+ R+ GP AL RRP  GEGSEHWA P   RYF SRAASIYGG+SE+QK+ILAK  L
Sbjct:    1 MDISLTPEQLAFRDEVRRFVRDRLPDDIRQRLRLGHPPRKEDTVRWQRILHERGWAAPHWPRAHGGSDMGPLERLILLDELYRAPAPLPQVFNVGMLGPVLMKFGTPEQQDWFLPRLARLDIWFCQGFSEPGSGSDLASLRTTARRDGDEYIVNGQKIWTTTAHWADWVFALVRTDSTAKKQNGISFVLIDLRTPGITIRPIHSIDGQHHLNEVFFDDVRIPVSQLVGEEGHGWDCAKFLLTNERTGIANVGLCRERLDYACELAGRITEGGKPMLDNARLRAEMAQLGAEVRALEITNWRYLLEPRTAQRVPGFASVLKLKGVELQQALAQLLQRIAGPQALRRRPHLGEGSEHWAGPLGMRYFYSRAASIYGGTSEVQKNILAKTLL 389          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A2E9BPC5_9BURK (Acyl-CoA dehydrogenase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2E9BPC5_9BURK)

HSP 1 Score: 556 bits (1434), Expect = 1.360e-196
Identity = 269/394 (68.27%), Postives = 320/394 (81.22%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGN----EYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            MD    P+Q AFR EVR FI +RLP +IR RL +GHP RK+D V +QRILNE+GWAAPHWP++YGGA+LGQAERLIL +E+ RAPAP+P +FNV MLGP+LL+FGT+ Q+  F+P+LA+ +LWFCQGFSEPGSGSDLASLRTSARREG      Y+V+GQKIWT++AH ADWVF LVRT+    KQ GI+FLL+D+RSPGIT+RPI SID  HHLNEVFFD VR PV NLVGEEGRGWDCAK+LL NERTGIANV  CRERLD+ R L  +LTQ GRPL +   L+AE+A LDAE+RALEVTNWR LL+  TA   P FASVLKLKGTE+QQ++  L+ R+ GP A+ERR  +G G+EHWA P A RYF SRAASIYGG+SE+QKDIL+K+ LG
Sbjct:    1 MDLATPPDQAAFRREVRQFIEERLPAEIRNRLRLGHPPRKQDTVTWQRILNEKGWAAPHWPREYGGAELGQAERLILLDELFRAPAPLPQVFNVGMLGPVLLKFGTEAQKRFFMPRLANLDLWFCQGFSEPGSGSDLASLRTSARREGEGEDEHYVVDGQKIWTTTAHLADWVFALVRTDGTGSKQHGISFLLIDLRSPGITIRPITSIDGQHHLNEVFFDAVRVPVGNLVGEEGRGWDCAKYLLMNERTGIANVGLCRERLDYARELAGRLTQAGRPLLDSPRLRAEMAVLDAEIRALEVTNWRFLLSNDTARKNPGFASVLKLKGTELQQEIAQLLQRIAGPAAMERRAHDGPGAEHWAGPLAMRYFYSRAASIYGGTSEVQKDILSKSILG 394          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A0S9MV56_9BURK (Acyl-CoA dehydrogenase n=2 Tax=unclassified Pseudorhodoferax TaxID=2638544 RepID=A0A0S9MV56_9BURK)

HSP 1 Score: 554 bits (1428), Expect = 8.330e-196
Identity = 265/390 (67.95%), Postives = 316/390 (81.03%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            MD  L+P QEAFR EVR F+++RLP DIRQRL +GHP RK+D V +QRILNERGWAAPHWP++YGGA+LGQ ERLIL +E+ RAPAP+P +FNV MLGP+L++FGT +Q D FLPKLA+ +LWFCQGFSEPGSGSDLASLRT+ARREG++YIVNGQKIWT++AH ADWVF LVRT+  ARKQ+GI+FLL+D+++PG+T+RPIVS+D  HHLNEVFFD VR PV +LVGEE +GW+CAKFLLGNERTGIANV  CRERLDF R +      G   L +   L++E A LDAE+RALE+TNWR LL      A PSFASVLKLKG E+QQD+ AL+AR+ GP  LERRP +  G    A P  PRYF SRAASIYGG+SE+QKDILAK  LG
Sbjct:    1 MDLNLSPAQEAFRDEVRTFVQQRLPHDIRQRLRLGHPPRKQDTVAWQRILNERGWAAPHWPRRYGGAELGQMERLILMDELYRAPAPLPQVFNVTMLGPVLMKFGTPEQCDFFLPKLANLDLWFCQGFSEPGSGSDLASLRTAARREGDDYIVNGQKIWTTTAHMADWVFALVRTDSQARKQEGISFLLIDLKTPGVTIRPIVSLDGDHHLNEVFFDEVRVPVGHLVGEENKGWNCAKFLLGNERTGIANVGLCRERLDFAREIAETTRDGHHRLIDSPQLRSEFATLDAEIRALEITNWRFLLTDSAREALPSFASVLKLKGVELQQDIAALLARLAGPAGLERRPLDDPG----AGPLVPRYFYSRAASIYGGTSEVQKDILAKTLLG 386          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A0K8P5Q9_IDESA (FadE30 protein n=1 Tax=Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6) TaxID=1547922 RepID=A0A0K8P5Q9_IDESA)

HSP 1 Score: 548 bits (1413), Expect = 1.840e-193
Identity = 261/390 (66.92%), Postives = 313/390 (80.26%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            M   LT  Q AFR EVR F+++RLP +IR RL +GHPARK+D V +QRILNERGWA PHWP++YGGA+LG  ERLIL +EI R PAP+P +FN  MLGP+LLRFGT++Q+  +LPKLA+ +LWFCQGFSEPG+GSDLASLRT+ARREG+ Y+VNGQKIWTS+AH AD+ FCLVRTEQ  RKQDGI+FL++D+R  G+TVRPI+SID  HHLNEVFFD+V AP+ENLVGEEGRGW+CAKFLLGNERT IANV  CRERLD+ R L  ++TQ G PL +D  L+AELA +DAE+RALE+TNWRMLL      A P+FASVLKLKG EIQQ++ AL+ R+ GP  LE+ P +      W     PRYF SRAASIYGG+SE+QKDILAK  LG
Sbjct:    1 MKLTLTDNQAAFRDEVRRFVKERLPAEIRDRLRLGHPARKQDTVTWQRILNERGWAVPHWPREYGGAELGPMERLILLDEIYRGPAPVPQVFNTTMLGPVLLRFGTERQKREWLPKLANVDLWFCQGFSEPGAGSDLASLRTTARREGDRYLVNGQKIWTSTAHLADYAFCLVRTEQTPRKQDGISFLMVDLRQKGVTVRPIISIDGGHHLNEVFFDDVEAPLENLVGEEGRGWECAKFLLGNERTMIANVGLCRERLDYARELATRVTQAGTPLIDDPKLRAELAWIDAEIRALEITNWRMLLTEREQAANPAFASVLKLKGVEIQQEVAALLMRIAGPLGLEKLPLDAAAPTPWQGLPGPRYFYSRAASIYGGTSEVQKDILAKTILG 390          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A4V1UPH8_9BURK (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A4V1UPH8_9BURK)

HSP 1 Score: 543 bits (1398), Expect = 1.140e-192
Identity = 262/296 (88.51%), Postives = 282/296 (95.27%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALE 888
            MDF+ TPEQ+AFR EVR FIR+RLP+DIR+RLAMGHPARK+DVVRFQRIL+ERGWAAPHWPK +GGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLL+FGT +Q+DHFLP+LASG LWFCQGFSEPGSGSDLASLRT+ARREGNEY+VNGQKIWTSSAHQADWVF LVRTEQA RKQDGI+FLL+DMR+PGITVRPIVSID+AHHLNEVFFDNVR PVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDF R L  +LTQ GRPLAE+AVLQAELAALDAEVRALE
Sbjct:    1 MDFRTTPEQDAFRAEVRTFIRERLPQDIRERLAMGHPARKDDVVRFQRILHERGWAAPHWPKAFGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLKFGTAKQQDHFLPRLASGGLWFCQGFSEPGSGSDLASLRTAARREGNEYVVNGQKIWTSSAHQADWVFALVRTEQAPRKQDGISFLLIDMRTPGITVRPIVSIDHAHHLNEVFFDNVRVPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFARTLAGKLTQAGRPLAENAVLQAELAALDAEVRALE 296          
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Match: A0A7Y6NMZ0_9BURK (Acyl-CoA dehydrogenase family protein n=1 Tax=Schlegelella koreensis TaxID=2742824 RepID=A0A7Y6NMZ0_9BURK)

HSP 1 Score: 545 bits (1405), Expect = 2.630e-192
Identity = 267/390 (68.46%), Postives = 316/390 (81.03%), Query Frame = 1
Query:    1 MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRILNERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPLLLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNEYIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVRPIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIANVAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNWRMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEGEGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG 1170
            MD  LT  Q+AFR EVRAFIR+RLP DIRQRL +GHP RK+D V +QRILNERGWAAPHWP++YGG++LGQ ERLIL +E+ RAPAP+P +FN+ MLGP+L++FGT  Q D FLP+LA+ +LWFCQGFSEPGSGSDLASLRT ARR+G+ Y+VNGQKIWT++AH ADWVF LVRT+ AA KQ GI+FLL+D+R+PGIT+RPI S+D  HHLNEVFFD+VR PV NLVGEE RGW CAKFLL NERTGIANV  CRERL+F R L     +G R L +DA L +E A LDAE+RALE+TNWR LL+     A P+FASVLKLKG E+QQD+ AL+AR+ GP  LERRP +    EH   P APRYF SRAASIYGG+SE+QKDILAKA +G
Sbjct:    1 MDLALTTAQQAFRDEVRAFIRERLPADIRQRLRLGHPPRKQDTVTWQRILNERGWAAPHWPRRYGGSELGQMERLILLDEMYRAPAPLPQVFNLTMLGPVLMKFGTPAQCDWFLPRLANLDLWFCQGFSEPGSGSDLASLRTHARRDGDHYVVNGQKIWTTTAHFADWVFALVRTDAAAHKQHGISFLLIDLRTPGITIRPITSLDGDHHLNEVFFDDVRVPVANLVGEENRGWSCAKFLLANERTGIANVGLCRERLEFARELAGSTREGERTLLDDAQLASEFATLDAEIRALEITNWRFLLSERARDALPAFASVLKLKGVELQQDIAALLARLHGPAGLERRPLDDR--EH--PPLAPRYFYSRAASIYGGTSEVQKDILAKAIVG 386          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11206.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2R5S5_9BURK8.820e-25990.51Acyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. ... [more]
A0A6P2EZ80_9BURK3.500e-22678.21Glutaryl-CoA dehydrogenase n=1 Tax=Variovorax sp. ... [more]
UPI001575692B2.130e-22076.15acyl-CoA dehydrogenase family protein n=1 Tax=Xeno... [more]
A0A679J9D1_VARPD1.680e-20370.26Acyl-CoA dehydrogenase n=4 Tax=Variovorax TaxID=34... [more]
UPI0019B1E8829.730e-19969.15Acyl-CoA dehydrogenase family protein n=1 Tax=Rhod... [more]
A0A2E9BPC5_9BURK1.360e-19668.27Acyl-CoA dehydrogenase n=4 Tax=unclassified Variov... [more]
A0A0S9MV56_9BURK8.330e-19667.95Acyl-CoA dehydrogenase n=2 Tax=unclassified Pseudo... [more]
A0A0K8P5Q9_IDESA1.840e-19366.92FadE30 protein n=1 Tax=Ideonella sakaiensis (strai... [more]
A0A4V1UPH8_9BURK1.140e-19288.51Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Burkhold... [more]
A0A7Y6NMZ0_9BURK2.630e-19268.46Acyl-CoA dehydrogenase family protein n=1 Tax=Schl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11206contigP-wetherbeei_contig11206:546..1718 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog266264.Rmet_5530
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1173
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00052
KEGG koko:K04118
KEGG ReactionR05311
KEGG Pathwayko00362,ko01120,map00362,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.11e-193
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1R9QW@1224|Proteobacteria,2VN6J@28216|Betaproteobacteria
EC1.3.1.62
DescriptionAcyl-CoA dehydrogenase, middle domain
Cds size1173
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185902.0984166-CDS-P-wetherbeei_contig11206:545..17181683185902.0984166-CDS-P-wetherbeei_contig11206:545..1718Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11206 546..1718 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11206.2.1prot_P-wetherbeei_contig11206.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11206 546..1718 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11206.2.1

>prot_P-wetherbeei_contig11206.2.1 ID=prot_P-wetherbeei_contig11206.2.1|Name=mRNA_P-wetherbeei_contig11206.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=391bp
MDFKLTPEQEAFRTEVRAFIRKRLPEDIRQRLAMGHPARKEDVVRFQRIL
NERGWAAPHWPKQYGGADLGQAERLILQEEIQRAPAPMPSIFNVVMLGPL
LLRFGTQQQRDHFLPKLASGELWFCQGFSEPGSGSDLASLRTSARREGNE
YIVNGQKIWTSSAHQADWVFCLVRTEQAARKQDGITFLLMDMRSPGITVR
PIVSIDNAHHLNEVFFDNVRAPVENLVGEEGRGWDCAKFLLGNERTGIAN
VAYCRERLDFVRALTRQLTQGGRPLAEDAVLQAELAALDAEVRALEVTNW
RMLLAPGTALAGPSFASVLKLKGTEIQQDLVALIARMGGPTALERRPTEG
EGSEHWAAPGAPRYFQSRAASIYGGSSEIQKDILAKAALG*
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mRNA from alignment at P-wetherbeei_contig11206:546..1718-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11206.2.1 ID=mRNA_P-wetherbeei_contig11206.2.1|Name=mRNA_P-wetherbeei_contig11206.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:546..1718- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTTCAAACTGACGCCGGAGCAGGAGGCCTTTCGCACCGAGGTGCG CGCGTTCATCCGGAAGCGGCTGCCCGAGGACATTCGCCAGCGCCTGGCGA TGGGGCATCCCGCGCGCAAGGAAGACGTGGTGCGCTTCCAGCGCATCCTC AACGAACGCGGATGGGCTGCACCCCATTGGCCAAAACAGTATGGCGGCGC CGACCTCGGTCAGGCTGAGCGGCTGATCCTCCAGGAAGAGATCCAGCGCG CACCCGCGCCCATGCCGTCGATCTTCAACGTGGTGATGTTGGGCCCGCTG CTGCTGCGCTTCGGCACGCAGCAGCAGCGCGACCATTTCCTGCCCAAACT GGCCAGCGGTGAGCTGTGGTTCTGCCAAGGCTTTTCCGAACCGGGCTCGG GCTCGGACCTCGCGTCCCTGCGCACCTCGGCCCGCCGTGAGGGCAACGAG TACATCGTCAATGGCCAGAAGATCTGGACCAGCTCGGCGCACCAGGCCGA CTGGGTGTTCTGTCTGGTGCGCACCGAGCAGGCCGCCAGAAAGCAGGACG GCATCACCTTCCTGTTGATGGATATGCGCTCGCCGGGCATCACCGTGCGT CCGATCGTCTCGATCGACAACGCTCACCACCTCAACGAGGTGTTCTTCGA CAACGTGCGCGCGCCGGTGGAAAACCTCGTGGGCGAGGAGGGCCGTGGCT GGGACTGCGCGAAGTTCCTGCTGGGCAACGAACGGACCGGCATCGCCAAC GTGGCCTATTGCCGTGAACGCCTGGACTTCGTCCGCGCGCTGACCCGCCA GCTCACTCAGGGCGGACGGCCGTTGGCCGAAGACGCCGTGCTGCAGGCCG AGTTGGCCGCGCTTGATGCCGAGGTGCGTGCGCTGGAGGTGACCAACTGG CGCATGTTGCTCGCGCCCGGCACGGCGTTGGCGGGTCCCTCATTCGCCTC GGTGCTCAAGCTCAAGGGCACCGAGATTCAGCAGGACCTGGTGGCACTGA TCGCGCGCATGGGAGGGCCCACCGCGCTGGAGCGGCGGCCGACCGAAGGC GAGGGCAGCGAACACTGGGCCGCGCCTGGCGCCCCCCGCTACTTCCAGTC GCGCGCGGCCAGCATCTACGGCGGCTCCAGCGAGATTCAGAAAGACATTT TGGCCAAGGCGGCTCTGGGATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11206:546..1718-

>mRNA_P-wetherbeei_contig11206.2.1 ID=mRNA_P-wetherbeei_contig11206.2.1|Name=mRNA_P-wetherbeei_contig11206.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:546..1718- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTTCAAACTGACGCCGGAGCAGGAGGCCTTTCGCACCGAGGTGCG
CGCGTTCATCCGGAAGCGGCTGCCCGAGGACATTCGCCAGCGCCTGGCGA
TGGGGCATCCCGCGCGCAAGGAAGACGTGGTGCGCTTCCAGCGCATCCTC
AACGAACGCGGATGGGCTGCACCCCATTGGCCAAAACAGTATGGCGGCGC
CGACCTCGGTCAGGCTGAGCGGCTGATCCTCCAGGAAGAGATCCAGCGCG
CACCCGCGCCCATGCCGTCGATCTTCAACGTGGTGATGTTGGGCCCGCTG
CTGCTGCGCTTCGGCACGCAGCAGCAGCGCGACCATTTCCTGCCCAAACT
GGCCAGCGGTGAGCTGTGGTTCTGCCAAGGCTTTTCCGAACCGGGCTCGG
GCTCGGACCTCGCGTCCCTGCGCACCTCGGCCCGCCGTGAGGGCAACGAG
TACATCGTCAATGGCCAGAAGATCTGGACCAGCTCGGCGCACCAGGCCGA
CTGGGTGTTCTGTCTGGTGCGCACCGAGCAGGCCGCCAGAAAGCAGGACG
GCATCACCTTCCTGTTGATGGATATGCGCTCGCCGGGCATCACCGTGCGT
CCGATCGTCTCGATCGACAACGCTCACCACCTCAACGAGGTGTTCTTCGA
CAACGTGCGCGCGCCGGTGGAAAACCTCGTGGGCGAGGAGGGCCGTGGCT
GGGACTGCGCGAAGTTCCTGCTGGGCAACGAACGGACCGGCATCGCCAAC
GTGGCCTATTGCCGTGAACGCCTGGACTTCGTCCGCGCGCTGACCCGCCA
GCTCACTCAGGGCGGACGGCCGTTGGCCGAAGACGCCGTGCTGCAGGCCG
AGTTGGCCGCGCTTGATGCCGAGGTGCGTGCGCTGGAGGTGACCAACTGG
CGCATGTTGCTCGCGCCCGGCACGGCGTTGGCGGGTCCCTCATTCGCCTC
GGTGCTCAAGCTCAAGGGCACCGAGATTCAGCAGGACCTGGTGGCACTGA
TCGCGCGCATGGGAGGGCCCACCGCGCTGGAGCGGCGGCCGACCGAAGGC
GAGGGCAGCGAACACTGGGCCGCGCCTGGCGCCCCCCGCTACTTCCAGTC
GCGCGCGGCCAGCATCTACGGCGGCTCCAGCGAGATTCAGAAAGACATTT
TGGCCAAGGCGGCTCTGGGATAA
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