mRNA_P-wetherbeei_contig10083.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10083.2.1
Unique NamemRNA_P-wetherbeei_contig10083.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: A0A251SAT2_HELAN (Putative alpha/Beta hydrolase fold protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SAT2_HELAN)

HSP 1 Score: 50.4 bits (119), Expect = 1.090e-5
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGT--WQHGDLVVTTPWIRSEGADIVRHAIDNAL 156
            E  L  L+ L WE+VD+ F GS      H  + V TPW+ S+GAD+++H +DN L
Sbjct:  361 ETMLRGLSQLCWERVDVSFKGSKQRYLAHNTIQVNTPWMNSDGADVIQHMVDNFL 415
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: A0A251VH02_HELAN (Putative alpha/beta-Hydrolases superfamily protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VH02_HELAN)

HSP 1 Score: 50.1 bits (118), Expect = 1.490e-5
Identity = 21/53 (39.62%), Postives = 34/53 (64.15%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGT--WQHGDLVVTTPWIRSEGADIVRHAIDN 150
            EA +  L  + WE++D+ F GS    + H  + V +PWI S+GAD+++H +DN
Sbjct:  348 EAMIRGLTKISWERIDVSFKGSKQRYFAHNTIQVNSPWINSDGADVIQHLVDN 400
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: UPI001CB9B8B3 (uncharacterized protein LOC122607624 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B8B3)

HSP 1 Score: 49.7 bits (117), Expect = 2.040e-5
Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGT--WQHGDLVVTTPWIRSEGADIVRHAIDN 150
            E  +  L  + WE+VD+ F GS    + H  + V TPW+ S+GADI++H +DN
Sbjct:  349 EEMIRGLTKINWERVDVSFKGSKQRYFAHNTIQVNTPWLNSDGADIIQHIVDN 401
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: UPI001CB8EF56 (putative lipase C4A8.10 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8EF56)

HSP 1 Score: 49.7 bits (117), Expect = 2.040e-5
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGT--WQHGDLVVTTPWIRSEGADIVRHAIDNAL 156
            E  +  L+ + WE+VD+ F GS    + H  + V TPW+ S+GAD+++H +DN L
Sbjct:  351 ETMIKGLSKVKWERVDVSFKGSKQRYFAHNTIQVNTPWMNSDGADVIQHMVDNFL 405
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: A0A2U1MBE9_ARTAN (Alpha/beta-Hydrolases superfamily protein n=3 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MBE9_ARTAN)

HSP 1 Score: 49.7 bits (117), Expect = 2.040e-5
Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGT--WQHGDLVVTTPWIRSEGADIVRHAIDN 150
            E  +  L  + WE+VD+ F GS    + H  + V TPW+ S+GADI++H +DN
Sbjct:  353 ETMIRGLTKISWERVDVSFKGSKQRYFAHNTIQVNTPWMNSDGADIIQHIVDN 405
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BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Match: A0A7N0VHC7_KALFE (DUF676 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VHC7_KALFE)

HSP 1 Score: 48.1 bits (113), Expect = 7.110e-5
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1 
Query:    1 EASLTALADLGWEQVDI-FNGSGTWQ--HGDLVVTTPWIRSEGADIVRHAIDNAL 156
            E  +  L  + WE++D+ F+G   W   H  + V TP+I SEGAD++ H +DN L
Sbjct:  295 EEMIRGLTKVSWERIDVGFSGFKQWVLGHSTIQVKTPFIHSEGADVIAHMVDNFL 349
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10083.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A251SAT2_HELAN1.090e-543.64Putative alpha/Beta hydrolase fold protein n=1 Tax... [more]
A0A251VH02_HELAN1.490e-539.62Putative alpha/beta-Hydrolases superfamily protein... [more]
UPI001CB9B8B32.040e-541.51uncharacterized protein LOC122607624 n=1 Tax=Erige... [more]
UPI001CB8EF562.040e-540.00putative lipase C4A8.10 n=1 Tax=Erigeron canadensi... [more]
A0A2U1MBE9_ARTAN2.040e-541.51Alpha/beta-Hydrolases superfamily protein n=3 Tax=... [more]
A0A7N0VHC7_KALFE7.110e-540.00DUF676 domain-containing protein n=1 Tax=Kalanchoe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10083contigP-wetherbeei_contig10083:2144..2320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G8V8
PFAMsDUF676
Model size177
Max annot lvl2759|Eukaryota
KEGG koko:K02737
KEGG Pathwayko03050,map03050
KEGG ModuleM00340
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.24e-11
EggNOG OGsKOG4372@1|root,KOG4372@2759|Eukaryota
EC3.4.25.1
Descriptionacylglycerol lipase activity
Cds size177
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185853.8844244-CDS-P-wetherbeei_contig10083:2143..23201683185853.8844244-CDS-P-wetherbeei_contig10083:2143..2320Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10083 2144..2320 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10083.2.1prot_P-wetherbeei_contig10083.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10083 2144..2320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10083.2.1

>prot_P-wetherbeei_contig10083.2.1 ID=prot_P-wetherbeei_contig10083.2.1|Name=mRNA_P-wetherbeei_contig10083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
EASLTALADLGWEQVDIFNGSGTWQHGDLVVTTPWIRSEGADIVRHAIDN
ALNRPIVT*
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mRNA from alignment at P-wetherbeei_contig10083:2144..2320+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10083.2.1 ID=mRNA_P-wetherbeei_contig10083.2.1|Name=mRNA_P-wetherbeei_contig10083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig10083:2144..2320+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGTCCCTGACAGCGCTGGCGGATCTGGGATGGGAGCAGGTGGACAT
CTTCAACGGATCCGGCACGTGGCAGCACGGGGACCTCGTGGTGACAACGC
CGTGGATCCGTTCCGAGGGTGCTGACATAGTGCGCCACGCCATCGACAAC
GCGCTGAACCGCCCCATCGTGACATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10083:2144..2320+

>mRNA_P-wetherbeei_contig10083.2.1 ID=mRNA_P-wetherbeei_contig10083.2.1|Name=mRNA_P-wetherbeei_contig10083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig10083:2144..2320+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGTCCCTGACAGCGCTGGCGGATCTGGGATGGGAGCAGGTGGACAT
CTTCAACGGATCCGGCACGTGGCAGCACGGGGACCTCGTGGTGACAACGC
CGTGGATCCGTTCCGAGGGTGCTGACATAGTGCGCCACGCCATCGACAAC
GCGCTGAACCGCCCCATCGTGACATGA
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