mRNA_P-wetherbeei_contig10079.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10079.2.1
Unique NamemRNA_P-wetherbeei_contig10079.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A7X8XLS7_9BURK (Response regulator transcription factor n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XLS7_9BURK)

HSP 1 Score: 429 bits (1104), Expect = 1.280e-151
Identity = 212/229 (92.58%), Postives = 223/229 (97.38%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYED 687
            MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDG+EAVNVA+QDRPDLIILD+MLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTS ++EEKDEI + NLS+NLVKHEVRKN + VELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSP+ LKTVHGIGYKFQ+E+
Sbjct:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGIEAVNVARQDRPDLIILDIMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSARSEEKDEITFDNLSINLVKHEVRKNGQVVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPRQLKTVHGIGYKFQFEE 229          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A355TQS1_9BACT (DNA-binding response regulator n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TQS1_9BACT)

HSP 1 Score: 370 bits (951), Expect = 2.640e-128
Identity = 178/231 (77.06%), Postives = 208/231 (90.04%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYEDPE 693
            MAKE ILVVDDE NIV L++YNLE++G+EVICA DG EA+ +A+++ PDLI+LDVMLP + G++VTR +R+E KTPIIM TAK EEIDK+LGLE+GADDYV KPFSPREL+AR+KAVLRRTS  +EEKDEI +  LS+NLVKHEVRKN + VELKPKEFDLL+LMATNPGKV+TRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIED+PS+PK LKTVHGIGYKFQ++D E
Sbjct:    1 MAKELILVVDDEANIVSLLRYNLEQQGFEVICASDGNEAIALARREHPDLILLDVMLPDRSGIDVTRTIRKESKTPIIMVTAKVEEIDKVLGLEMGADDYVSKPFSPRELIARIKAVLRRTSDHSEEKDEITFDKLSINLVKHEVRKNGQIVELKPKEFDLLRLMATNPGKVYTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDDPSNPKQLKTVHGIGYKFQHDDNE 231          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A1V5PKG8_9BACT (Transcriptional regulatory protein YycF n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PKG8_9BACT)

HSP 1 Score: 363 bits (931), Expect = 3.380e-125
Identity = 173/229 (75.55%), Postives = 209/229 (91.27%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYED 687
            MA+E+ILVVDDERNIVEL+K+NL+KEGYEV+ A+DG+EA+ VA++++PDL++LD+M+P  GGL+V R LR+E K PIIM TA+GEEID+ILGLELGADDYV KPFSPREL+AR+KAVLRRTS K +E++E+ + NL LNL+KHEVR N K+++LKPKEFDLLKL+ATN GKVFTRDFLLEQLWGYDYLGDTRTVDVH+RRLRQKIED+PS+PK LKTVHGIGYKFQ ED
Sbjct:    1 MAREKILVVDDERNIVELMKFNLKKEGYEVVTAFDGVEALRVAREEKPDLMVLDLMMPELGGLDVCRTLRKESKIPIIMVTARGEEIDRILGLELGADDYVLKPFSPRELIARIKAVLRRTSQKIDEQEELHFDNLYLNLIKHEVRINEKKIDLKPKEFDLLKLLATNAGKVFTRDFLLEQLWGYDYLGDTRTVDVHVRRLRQKIEDKPSNPKYLKTVHGIGYKFQGED 229          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A7C5ZPK6_9BACT (Response regulator transcription factor n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5ZPK6_9BACT)

HSP 1 Score: 302 bits (773), Expect = 2.960e-101
Identity = 140/229 (61.14%), Postives = 184/229 (80.35%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYED 687
            M++ +IL+VDDE+NIVELIK++L+KE Y ++ AY G +A+ + ++++PDLIILD+MLP  GG EV + +R+E K PIIM TAKGEE+DKILG ELGADDY+ KPFSPREL+AR+KA+L+R+     E +E+  G   +N+   E+ K  K +ELKPKEFDLLKL  TNPG+VF+R +LLEQ+WGYDYLGDTRTVDVH+RRLRQKIED P +P  ++TVHG+GYKF  E+
Sbjct:    1 MSEAKILIVDDEKNIVELIKFHLKKESYRIVEAYKGKDAIELFRKEKPDLIILDLMLPDMGGFEVCKAIRKESKVPIIMLTAKGEEVDKILGFELGADDYLTKPFSPRELLARIKAILKRSRINPNEINEVSIGPFKINVSTREIYKEDKLLELKPKEFDLLKLFLTNPGRVFSRQYLLEQIWGYDYLGDTRTVDVHIRRLRQKIEDNPDNPIYIRTVHGVGYKFIIEE 229          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A7C2QEU1_9BACT (Response regulator transcription factor n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2QEU1_9BACT)

HSP 1 Score: 298 bits (763), Expect = 1.120e-99
Identity = 143/227 (63.00%), Postives = 180/227 (79.30%), Query Frame = 1
Query:   13 RILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYEDPE 693
            +IL+VDDE+NIVELIK++L+KE Y VI AY G +A+++ K+++PDLIILDVMLP  GG EV + +R+E K PIIM TAKGEEIDKILG ELGADDY+ KPFSPREL+AR+KA+L+RT     + ++I  G   +N+ + E+ KN   +ELKPKEFDLLKL   NPG+VFTR +LLEQ+WGYDYLGDTRTVDVH+RRLRQKIED   +   +KT+HG+GYKF  E  E
Sbjct:    4 KILIVDDEKNIVELIKFHLKKENYRVIEAYKGKDAIDLFKKEKPDLIILDVMLPDMGGFEVCKNIRKESKVPIIMLTAKGEEIDKILGFELGADDYITKPFSPRELLARIKAILKRTRTTNVDTNQIQLGPFKVNVNRREIYKNDVLLELKPKEFDLLKLFIMNPGRVFTRQYLLEQIWGYDYLGDTRTVDVHIRRLRQKIEDNAKNATYIKTIHGVGYKFVIEGEE 230          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A3G2R5I5_9FIRM (Stage 0 sporulation protein A homolog n=3 Tax=Clostridia TaxID=186801 RepID=A0A3G2R5I5_9FIRM)

HSP 1 Score: 290 bits (743), Expect = 1.190e-96
Identity = 140/228 (61.40%), Postives = 184/228 (80.70%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKT---PIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKF 675
            M+KE+IL+VDDE +I+EL+++NLE  G++VI A DG +A+ +A+ + PDLI+LD+MLPG  GLEV RILR++  T   PIIM TAK EEIDK+LGLE+GADDY+ KPFSPREL ARVKAVLRR++G  + ++ I  GNL +++ KHEV  + ++ E  PKEFDLLKL+A+NPGKVF+R++LLE +WGYDYLGDTRTVDVH+R LRQK+E +   P  ++TV GIGYKF
Sbjct:    1 MSKEKILIVDDEPHILELVRFNLEAGGFKVIEAPDGQKAIELAQTENPDLILLDLMLPGTDGLEVCRILRQQKATREIPIIMLTAKSEEIDKVLGLEIGADDYITKPFSPRELTARVKAVLRRSAGSEKTENNIKIGNLVIDIEKHEVLVDGEKQEFTPKEFDLLKLLASNPGKVFSREYLLENIWGYDYLGDTRTVDVHIRHLRQKVEKDSDRPVYIETVRGIGYKF 228          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A7C6PU02_9FIRM (Stage 0 sporulation protein A homolog n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C6PU02_9FIRM)

HSP 1 Score: 285 bits (730), Expect = 1.130e-94
Identity = 141/228 (61.84%), Postives = 179/228 (78.51%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDE---IVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKF 675
            M  E+IL+VDDE +IVE +K NLE+ GYEVI AYDG EA+ +AK++RP LIILD+MLPG  G EV R +R+    P+IM TAKGE+IDKILGLELGADDY+ KPF+PREL ARVKA+LRR   + E ++E   IV  +L L+L + EV    K VEL PKEFDLL+ +++NPGKV++R+ LL +LWGYDY GD++TVDVH+RRLR+KIE+EPS PK + TV G+GYKF
Sbjct:    1 MRLEKILLVDDEVSIVEFVKINLERAGYEVIAAYDGNEAIQLAKRERPALIILDIMLPGLDGFEVLREIRKFSNVPVIMLTAKGEDIDKILGLELGADDYLTKPFNPRELTARVKAILRRIDKQNEGREEAGRIVIADLDLDLNRREVFVRGKPVELTPKEFDLLEFLSSNPGKVYSRETLLRELWGYDYYGDSKTVDVHIRRLREKIEEEPSKPKYILTVWGVGYKF 228          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: D9S2V2_THEOJ (Stage 0 sporulation protein A homolog n=2 Tax=Thermosediminibacter TaxID=291988 RepID=D9S2V2_THEOJ)

HSP 1 Score: 285 bits (729), Expect = 1.600e-94
Identity = 141/235 (60.00%), Postives = 187/235 (79.57%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKT---PIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVY-GNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKFQYEDPE 693
            MAKE+ILVVDDE NIVEL+++NLE  G++VI A DG +A+++ ++++PDL+ILD+MLPG  GLEV RI RR+  T   P+I+ TAK EEIDK+LGLE+GADDY+ KPFSPRELVARVKAVLRR   K E  D+I+  G +++++ +HEV    +  +  PKEF+LL+L+A+NPGKVF+R++LLE +WGYDYLGDTRTVDVH+R LRQKIE    +P+ ++TV GIGYKF   +PE
Sbjct:    1 MAKEKILVVDDEPNIVELVRFNLENSGFKVITASDGQQALDLVQKEQPDLVILDIMLPGIDGLEVCRIFRRQRATRDIPVILLTAKTEEIDKVLGLEMGADDYITKPFSPRELVARVKAVLRRAD-KVERSDKIIKAGPITIDVERHEVFVEGERKDFTPKEFELLRLLASNPGKVFSREYLLENIWGYDYLGDTRTVDVHIRHLRQKIERNSDTPQFIETVRGIGYKFN--EPE 232          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A7X2MW75_9CLOT (Stage 0 sporulation protein A homolog n=1 Tax=Inconstantimicrobium porci TaxID=2652291 RepID=A0A7X2MW75_9CLOT)

HSP 1 Score: 281 bits (719), Expect = 5.140e-93
Identity = 135/228 (59.21%), Postives = 181/228 (79.39%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREM---KTPIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKF 675
            M+ E+IL+VDDE+NIVELIK+NLE  GY V+CAY+G +AV++AK+++P LI+LD+MLP + GLEV + +RR++    TPIIM TAK EE+DKILGLELGADDY+ KPFS REL+ARVKA+LRRT       +     NLS++  KHEV+K+   V+L  KEF+LL+ +  N GKV TRD LL+++WGY+Y+G+TRTVDVH+R LR+KIED+ S PKL++T+ GIGY+F
Sbjct:    1 MSDEKILIVDDEQNIVELIKFNLESSGYNVLCAYNGQDAVDIAKKEQPSLILLDLMLPVKDGLEVCKEIRRDILISNTPIIMLTAKCEELDKILGLELGADDYITKPFSVRELIARVKAILRRTQYSNNNHNSFTIQNLSIDFSKHEVKKDGAIVDLTLKEFELLEHLVKNRGKVLTRDVLLDKIWGYEYIGETRTVDVHIRHLRKKIEDDDSKPKLIETIRGIGYRF 228          
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Match: A0A140LD40_9FIRM (Stage 0 sporulation protein A homolog n=2 Tax=Thermosediminibacteraceae TaxID=2770093 RepID=A0A140LD40_9FIRM)

HSP 1 Score: 280 bits (717), Expect = 1.070e-92
Identity = 139/228 (60.96%), Postives = 178/228 (78.07%), Query Frame = 1
Query:    1 MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDLIILDVMLPGQGGLEVTRILRREMKT---PIIMATAKGEEIDKILGLELGADDYVPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAKEVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRRLRQKIEDEPSSPKLLKTVHGIGYKF 675
            MA  +ILVVDDE  IVEL+K+NLE  GYEVI A DG EA+ + +++ PDLIILD+MLPG  G+E+ R LR + +T   P+I+ TAK  EIDK+LGLE+GADDY+ KPFSPRELVARV+AVLRRT  KA  ++ I  G + +++ +HEV  + K+ +  PKEF+LLKL+A+NPGKVF+R++LLE +WGYDYLGDTRTVDVH+R LRQKIE     PK +KTV G+GYKF
Sbjct:    1 MAGAKILVVDDEPFIVELVKFNLESAGYEVITASDGHEALKLIEKEHPDLIILDIMLPGIDGMEICRALRFKRETRDIPVILLTAKTGEIDKVLGLEMGADDYITKPFSPRELVARVRAVLRRTDKKARSEELIKAGPVVIDVDRHEVFVDGKKKDFTPKEFELLKLLASNPGKVFSREYLLENVWGYDYLGDTRTVDVHIRHLRQKIEKNSEDPKYIKTVRGVGYKF 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10079.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XLS7_9BURK1.280e-15192.58Response regulator transcription factor n=1 Tax=Bu... [more]
A0A355TQS1_9BACT2.640e-12877.06DNA-binding response regulator n=1 Tax=bacterium U... [more]
A0A1V5PKG8_9BACT3.380e-12575.55Transcriptional regulatory protein YycF n=1 Tax=ba... [more]
A0A7C5ZPK6_9BACT2.960e-10161.14Response regulator transcription factor n=1 Tax=ba... [more]
A0A7C2QEU1_9BACT1.120e-9963.00Response regulator transcription factor n=1 Tax=ba... [more]
A0A3G2R5I5_9FIRM1.190e-9661.40Stage 0 sporulation protein A homolog n=3 Tax=Clos... [more]
A0A7C6PU02_9FIRM1.130e-9461.84Stage 0 sporulation protein A homolog n=1 Tax=Clos... [more]
D9S2V2_THEOJ1.600e-9460.00Stage 0 sporulation protein A homolog n=2 Tax=Ther... [more]
A0A7X2MW75_9CLOT5.140e-9359.21Stage 0 sporulation protein A homolog n=1 Tax=Inco... [more]
A0A140LD40_9FIRM1.070e-9260.96Stage 0 sporulation protein A homolog n=2 Tax=Ther... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10079contigP-wetherbeei_contig10079:974..1669 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog555079.Toce_0967
Preferred namephoP
PFAMsResponse_reg,Trans_reg_C
Model size696
Max annot lvl186801|Clostridia
KEGG koko:K02483,ko:K07658,ko:K07668
KEGG Pathwayko02020,map02020
KEGG ModuleM00434,M00459
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.63e-95
EggNOG OGsCOG0745@1|root,COG0745@2|Bacteria,1TPWS@1239|Firmicutes,25AZ2@186801|Clostridia,42JDU@68295|Thermoanaerobacterales
DescriptionResponse regulator receiver
Cds size696
COG categoryK
BRITEko00000,ko00001,ko00002,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185853.6329644-CDS-P-wetherbeei_contig10079:973..16691683185853.6329644-CDS-P-wetherbeei_contig10079:973..1669Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10079 974..1669 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10079.2.1prot_P-wetherbeei_contig10079.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10079 974..1669 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10079.2.1

>prot_P-wetherbeei_contig10079.2.1 ID=prot_P-wetherbeei_contig10079.2.1|Name=mRNA_P-wetherbeei_contig10079.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp
MAKERILVVDDERNIVELIKYNLEKEGYEVICAYDGMEAVNVAKQDRPDL
IILDVMLPGQGGLEVTRILRREMKTPIIMATAKGEEIDKILGLELGADDY
VPKPFSPRELVARVKAVLRRTSGKAEEKDEIVYGNLSLNLVKHEVRKNAK
EVELKPKEFDLLKLMATNPGKVFTRDFLLEQLWGYDYLGDTRTVDVHMRR
LRQKIEDEPSSPKLLKTVHGIGYKFQYEDPE*
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mRNA from alignment at P-wetherbeei_contig10079:974..1669+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10079.2.1 ID=mRNA_P-wetherbeei_contig10079.2.1|Name=mRNA_P-wetherbeei_contig10079.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig10079:974..1669+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAAAGAGCGCATCCTCGTTGTAGATGACGAGCGCAACATCGTTGA GCTAATTAAGTATAACCTTGAAAAAGAAGGCTACGAAGTCATCTGCGCAT ACGACGGGATGGAAGCCGTCAATGTGGCCAAGCAGGACCGTCCTGATCTT ATCATTCTCGACGTCATGCTGCCCGGTCAGGGCGGTCTTGAGGTCACCCG CATTTTGCGGCGCGAGATGAAGACGCCTATCATCATGGCGACGGCCAAGG GCGAGGAGATCGATAAGATTCTCGGCCTCGAGCTCGGTGCCGACGATTAC GTGCCCAAGCCGTTCTCGCCGCGCGAGCTGGTCGCCCGCGTGAAGGCTGT GTTGCGCCGCACCAGCGGCAAGGCAGAAGAAAAAGATGAAATCGTCTACG GCAACCTTTCGCTGAACCTGGTCAAGCATGAAGTTCGCAAGAATGCCAAG GAAGTGGAGCTCAAGCCCAAGGAGTTCGACCTCCTCAAGCTTATGGCCAC CAATCCTGGCAAGGTCTTCACCCGCGACTTCCTGCTCGAGCAGCTGTGGG GCTACGACTACCTTGGCGATACTCGCACAGTGGACGTGCATATGCGCCGT CTGCGCCAGAAAATCGAAGACGAGCCCAGTTCTCCCAAGCTCCTCAAGAC GGTGCACGGCATCGGCTACAAGTTCCAGTACGAAGACCCCGAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10079:974..1669+

>mRNA_P-wetherbeei_contig10079.2.1 ID=mRNA_P-wetherbeei_contig10079.2.1|Name=mRNA_P-wetherbeei_contig10079.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig10079:974..1669+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAAAGAGCGCATCCTCGTTGTAGATGACGAGCGCAACATCGTTGA
GCTAATTAAGTATAACCTTGAAAAAGAAGGCTACGAAGTCATCTGCGCAT
ACGACGGGATGGAAGCCGTCAATGTGGCCAAGCAGGACCGTCCTGATCTT
ATCATTCTCGACGTCATGCTGCCCGGTCAGGGCGGTCTTGAGGTCACCCG
CATTTTGCGGCGCGAGATGAAGACGCCTATCATCATGGCGACGGCCAAGG
GCGAGGAGATCGATAAGATTCTCGGCCTCGAGCTCGGTGCCGACGATTAC
GTGCCCAAGCCGTTCTCGCCGCGCGAGCTGGTCGCCCGCGTGAAGGCTGT
GTTGCGCCGCACCAGCGGCAAGGCAGAAGAAAAAGATGAAATCGTCTACG
GCAACCTTTCGCTGAACCTGGTCAAGCATGAAGTTCGCAAGAATGCCAAG
GAAGTGGAGCTCAAGCCCAAGGAGTTCGACCTCCTCAAGCTTATGGCCAC
CAATCCTGGCAAGGTCTTCACCCGCGACTTCCTGCTCGAGCAGCTGTGGG
GCTACGACTACCTTGGCGATACTCGCACAGTGGACGTGCATATGCGCCGT
CTGCGCCAGAAAATCGAAGACGAGCCCAGTTCTCCCAAGCTCCTCAAGAC
GGTGCACGGCATCGGCTACAAGTTCCAGTACGAAGACCCCGAATAA
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