mRNA_P-wetherbeei_contig1007.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI) HSP 1 Score: 287 bits (734), Expect = 4.820e-92 Identity = 173/292 (59.25%), Postives = 190/292 (65.07%), Query Frame = 1 Query: 22 VALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKP--PVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXT----------------------GPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVA--------------------GCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARALQA 765 VALTREAGKNGKLA LL + GI SVE+PCIAH DG D LLP LA+ +YV +TSPEAA VFL GW AG P PV VACVGKATG+AL GGV+PVFTPSKA GETLA E+PL XXXX GP +LYPAS+KAQ TLE GL ARGF VRRL+ YDTVPA W + EAAAA A+VAAFGSPSAVKTWAAR GV G LAACIGETSA ACR+ GW E AIFYPE+PGM+GW AV +AL A Sbjct: 75 VALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXXXXXXXXXXXXXXXXXXXXXXGP--RVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVVAAGVXXXXXXXXXXXXXXXXGALAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAA 364
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA) HSP 1 Score: 246 bits (628), Expect = 2.260e-77 Identity = 137/247 (55.47%), Postives = 164/247 (66.40%), Query Frame = 1 Query: 19 TVALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKPPVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARAL 759 TVALTREAG NGKL +LL +GI VE+PCIA DG DS LP LA ++ YV +TSPE+A VFL+ W A +P VSVACVG ATG+AL G+ P FTPS+A GE LA E+PL G +LYPAS++A T+++GL ARGF V RL+ YDT A WS AD + AA AAVAAFGSPSAVK W + GV AACIG TSA A + GW ++ IF+PE+PGM GW AV AL Sbjct: 35 TVALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPLPPSAAVGE------GGAPRVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVEAAAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEAL 275
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP) HSP 1 Score: 231 bits (589), Expect = 7.050e-71 Identity = 136/248 (54.84%), Postives = 166/248 (66.94%), Query Frame = 1 Query: 22 VALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKPPVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVAS--ILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARAL 759 VALTRE GKN KL +L+E+GIR+VE+PCIA G D+E LP L E + YV +TSPEAASVFL WR+AG+P + VACVG T +AL+ GG+ PVF PSKA G+TLA ELP GP S +LYPAS+KA+ ++ GL ARGF+V RL+ YDTV A WS + A+AAV A SPSAVKTWA R G AACIGETSA AC++ G+ E +F+PE PG+ GW AV AL Sbjct: 88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQE-EWEYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP---------------GPRRSGRVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGTKQ-YAACIGETSAAACKELGF--EHVFWPESPGILGWAQAVHDAL 316
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA) HSP 1 Score: 231 bits (588), Expect = 9.390e-71 Identity = 138/264 (52.27%), Postives = 162/264 (61.36%), Query Frame = 1 Query: 22 VALTREAGKNGKL-ASLLAERGIRSV------------EIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKPPV-SVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVAGC---LAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARALQ 762 +ALTRE GKNGKL +L + I+ + EIPCIAHADG DS++L TL+ F YVAITSPEAA VF W D G+P V SVA VGKAT EAL+ G+ F PSKA TL ELP G S+LYPAS+KAQ TL++GL RGF V RL+ YDTV A W+ +E+ A + VA F SPSAVK W C LAACIGETS AC+K GW EE IFYPE+PG+DGW +VA ALQ Sbjct: 63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTLEEATNE-------GRSTSLLYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAWVKNTAQLDCPRALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANALQ 319
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC) HSP 1 Score: 226 bits (575), Expect = 1.280e-69 Identity = 134/249 (53.82%), Postives = 164/249 (65.86%), Query Frame = 1 Query: 22 VALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKPPVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVAS--ILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARALQ 762 VALTRE GKN KL L+E+G+R+VE+PCIA G DS+ LP L E + YV +TSPEAASVFL WR A +P + VACVG T +AL+ GG+ PVF PSKA G+TLA ELP GP + +LYPAS+KA+ ++ GL ARGF V RL+ YDTV A WS + AA+AAV A SPSAVKTWA R G AACIGETSA AC++ G+ E +F+PE PG+ GW AV AL+ Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP---------------GPQGNGRVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGTKQ-YAACIGETSASACKELGF--EHVFWPESPGIPGWAQAVHDALE 253
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A6V1PSP3_HETAK (Uroporphyrinogen-III synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSP3_HETAK) HSP 1 Score: 221 bits (563), Expect = 1.670e-67 Identity = 131/252 (51.98%), Postives = 159/252 (63.10%), Query Frame = 1 Query: 7 QVDVTVALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLA-EFSFSYVAITSPEAASVFLKGWRDAGKPPVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARAL 759 Q+D VALTREAGKNGKL LL + G VE+PCI HA G+D + L P L+ + + YV ITSPEAA VFLK W+ AGKP VSVA VG AT E L GG+TP F PSKA L+ ELPL ++ +LYPAS KA+ TLE GLAARGF+V RL+ Y T+P W+ D AAA+A V A SP+A WA G AACIG T+A C+K+G+ I+ PE+PGMDG V AV A+ Sbjct: 40 QLDAKVALTREAGKNGKLKKLLIDEGFEVVELPCIRHARGEDLDKLAPALSSDEPYDYVIITSPEAADVFLKEWKKAGKPQVSVASVGAATSETLMEGGITPAFEPSKATAAVLSEELPLNG--------------LSRVLYPASEKAKETLESGLAARGFSVTRLNTYTTLPTKWNEMDYVAAASADVVALASPTAADAWAGLVGRPRKPAACIGLTTAEECKKRGFG--LIYCPEKPGMDGLVGAVKLAV 275
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS) HSP 1 Score: 212 bits (539), Expect = 2.410e-63 Identity = 132/263 (50.19%), Postives = 156/263 (59.32%), Query Frame = 1 Query: 22 VALTREAGKNGKLA-SLLAERGIRSV-----------EIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKPPVS-VACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAARRG----VAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARAL 759 VALTRE GKN KL +LL+ I+ + EIPCI HADG D++ L PTLA F YVAITSPEAA V + W +AG+P + VA VGKAT E+L+ G+ F PSKA TL ELPL G +++ YPAS+KA TL++GL RGF V RL+ YDTVPA W A +A VA F SPSAVK W A AACIGETSA ACRK W E IFYPE+PG+DGW +VA AL Sbjct: 67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLSDAATKE-------GRSSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAWLKNTDGMNKPARAKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV) HSP 1 Score: 207 bits (526), Expect = 8.680e-61 Identity = 134/271 (49.45%), Postives = 158/271 (58.30%), Query Frame = 1 Query: 22 VALTREAGKNGKLA-SLLAERGIRSV------EIPCIAHADGKDSELLPPTLAEF----SFSYVAITSPEAASVFLKGWRDAGKPPVS-VACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTW--------AARRGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARALQARVA 774 VALTRE GKN KL +LL+ I EIPCIAHADG DS++L P L+ +F YVA+TSPEAA V W AG+P + V VGKAT EAL R G+ F PSKA +TL ELP G + ++LYPAS+KA++TLE GL RGF V RLD YDT+PA W+ + A VA F SPSA+ W RRG AACIGETSA CR GW E IFYPE+PG+DGW AVA AL+A A Sbjct: 115 VALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEELP-------ESGDATMEGRLTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNLEDTEGGRRGNT-IAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADALEAVAA 377
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO) HSP 1 Score: 202 bits (515), Expect = 3.590e-60 Identity = 122/246 (49.59%), Postives = 143/246 (58.13%), Query Frame = 1 Query: 25 ALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAGKP-PVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAAR-RGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARA 756 A TRE GKN +L + + VE+PCIAHADG D L TL + YV ITSPEAA V W+ P P +V VGKAT +AL+ G+ F PSKA E L ELPL +LYPAS +AQ TL+DGL RGF V RL+ YDTV A W+ + AA +A F SPSAVK W LAACIGETSA ACR++GW EE IFYPE+PGM+GWV AVA A Sbjct: 50 AATREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPLPSQQQQQP----------KVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGWLLNTENNNAVLAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEA 285
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO) HSP 1 Score: 202 bits (513), Expect = 7.160e-60 Identity = 122/248 (49.19%), Postives = 145/248 (58.47%), Query Frame = 1 Query: 25 ALTREAGKNGKLASLLAERGIRSVEIPCIAHADGKDSELLPPTLAEFSFSYVAITSPEAASVFLKGWRDAG---KPPVSVACVGKATGEALERGGVTPVFTPSKANGETLATELPLXXXXXXXXXXXXXTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTVPADWSAADEAAAATAAVAAFGSPSAVKTWAAR-RGVAGCLAACIGETSAVACRKQGWPEEAIFYPEQPGMDGWVAAVARA 756 A TRE GKN +L + + VE+PCIAHADG D L TL + YV ITSPEAA V W+ PP +V VGKAT +AL+ G+T F PSKA E L ELPL + +LYPAS +AQ TL+DGL RGF V RL+ YDTV A W+ + AA +A F SPSAVK W LAACIGETSA ACR++GW EE IFYP++PGM+GWV AVA A Sbjct: 50 AATREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPLP------------SSQQPRVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNTENNHQVLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEA 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1007.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1007.3.1 >prot_P-wetherbeei_contig1007.3.1 ID=prot_P-wetherbeei_contig1007.3.1|Name=mRNA_P-wetherbeei_contig1007.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MAAAAAAAAAAGTGPVASILYPASSKAQRTLEDGLAARGFAVRRLDVYDTback to top mRNA from alignment at P-wetherbeei_contig1007:3078..3986- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1007.3.1 ID=mRNA_P-wetherbeei_contig1007.3.1|Name=mRNA_P-wetherbeei_contig1007.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=909bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:3078..3986- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1007:3078..3986- >mRNA_P-wetherbeei_contig1007.3.1 ID=mRNA_P-wetherbeei_contig1007.3.1|Name=mRNA_P-wetherbeei_contig1007.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:3078..3986- (Phaeothamnion wetherbeei SAG_119_79)back to top |