mRNA_P-wetherbeei_contig21312.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21312.1.1
Unique NamemRNA_P-wetherbeei_contig21312.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A1F4DS31_9PROT (Polyribonucleotide nucleotidyltransferase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DS31_9PROT)

HSP 1 Score: 583 bits (1502), Expect = 1.890e-202
Identity = 295/380 (77.63%), Postives = 334/380 (87.89%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            N EVD DI A++G+SAALAI+G+PFNGPIGAARVGYIDGQYVLNPT ++L +S+L+LVVAGT QAVLMVESEA +L E+VMLGAVV+GHEQMQ+ I  INE+V +AG P WDW     D+ALVARIA  +E+ L  AFQIKQKQARS+ ID IWK +F E+ VG  G P +  VK+ CF LESKIVR Q+L GEPRIDGRDTRTVRPI+IR+ VLPRAHGSALFTRGETQA+V ATLGT+RDEQ IDAL GEY +RFMLHYNMPPYATGETGRVG+PKRREIGHGRLAKRALLAVLP  E+FAY++RVVSEITESNGSSSMASVCGGCL+L+DAGVPLKAHVAGIAMGLIKEGN+FAVL+DILGDEDHLGDMDFKVAG+E
Sbjct:  112 NNEVDSDILAMIGASAALAISGIPFNGPIGAARVGYIDGQYVLNPTATELRSSQLNLVVAGTRQAVLMVESEAQELAEDVMLGAVVYGHEQMQAVINVINEMVDEAGAPMWDWAPKAKDEALVARIAELAENDLNAAFQIKQKQARSEAIDNIWKRVFTEVGVGAEGGPDANAVKESCFALESKIVRGQVLNGEPRIDGRDTRTVRPISIRSGVLPRAHGSALFTRGETQALVAATLGTSRDEQIIDALQGEYKERFMLHYNMPPYATGETGRVGSPKRREIGHGRLAKRALLAVLPTPEEFAYSLRVVSEITESNGSSSMASVCGGCLALMDAGVPLKAHVAGIAMGLIKEGNRFAVLSDILGDEDHLGDMDFKVAGTE 491          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A521XAG8_9PROT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XAG8_9PROT)

HSP 1 Score: 582 bits (1499), Expect = 7.470e-202
Identity = 292/380 (76.84%), Postives = 335/380 (88.16%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            NPEVDPDIAAL+G SAAL ++G+PFNGP  AARVGY +GQY+LNPT +QL +S+L+LVVAGTE AVLMVESEA +L+EEVMLGAV+FGH+QMQ+AI AINEL   A +P WDW+ +  D++L ARIAA +E  LR AFQ+K+KQARS+ IDA+WK +F E+ VG  G P +  VK+ICF LESKIVR+QIL+GEPRIDGRDTR+VRPI+IR  VLPRAHGSALFTRGETQA+VVATLGTARD Q IDALMGEY DRFMLHYN PPYATGETGRVG+PKRREIGHGRLAKRALLA LP  E+F Y+MRVVSEITESNGSSSMASVCGG L+L+DAGVP+KAHVAGIAMGLIKEGN+FAVLTDILGDEDHLGDMDFKVAG++
Sbjct:  120 NPEVDPDIAALIGVSAALTLSGIPFNGPTAAARVGYANGQYILNPTATQLKDSKLNLVVAGTEHAVLMVESEAQELSEEVMLGAVMFGHQQMQAAITAINELADAAARPMWDWQPSAKDESLTARIAAMAEGDLRAAFQVKEKQARSEAIDALWKRVFTEVGVGGDGGPDANAVKEICFALESKIVRNQILDGEPRIDGRDTRSVRPISIRLGVLPRAHGSALFTRGETQAIVVATLGTARDSQIIDALMGEYKDRFMLHYNFPPYATGETGRVGSPKRREIGHGRLAKRALLATLPSVEEFGYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPMKAHVAGIAMGLIKEGNRFAVLTDILGDEDHLGDMDFKVAGTQ 499          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A537C2I5_9PROT (Polyribonucleotide nucleotidyltransferase n=8 Tax=Bacteria TaxID=2 RepID=A0A537C2I5_9PROT)

HSP 1 Score: 578 bits (1490), Expect = 1.610e-200
Identity = 292/381 (76.64%), Postives = 329/381 (86.35%), Query Frame = 1
Query:   22 CNPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            CNPEVDPDI AL+G SAAL ++G+PF GPIGAARVGY+ G+YVLNPT +QL  SRL+LVVAGTE AVLMVESEA +L E+VMLG+VVFGH+QMQ+AIKAIN+L  +A K  WDWK A  D+AL  RI   SES LR AF++KQKQARS+ IDAIWK +F  + VG  G P +  VKDICF LESKIVR QIL+GE RIDGRDTRTVRPI +R  VLPR HGSALFTRGETQA+VVATLGT RDEQ IDALMGEY +RFMLHYNMPPYATGETGR+G+PKRREIGHGRLAKRAL A+LP  E+FAY+MRVVSEITESNGSSSMASVCGG L+L+DAGVP+KAHVAGIAMGLIKEG +F+VLTDILGDEDHLGDMDFKVAG+E
Sbjct:  121 CNPEVDPDIPALIGVSAALTLSGIPFKGPIGAARVGYVSGEYVLNPTATQLKESRLNLVVAGTEHAVLMVESEASELPEDVMLGSVVFGHQQMQAAIKAINDLADEAAKAAWDWKPAAKDEALAERIRELSESDLRAAFKLKQKQARSEAIDAIWKRVFEAVGVGAEGGPEANAVKDICFALESKIVRKQILDGEARIDGRDTRTVRPINVRVGVLPRTHGSALFTRGETQALVVATLGTGRDEQIIDALMGEYKERFMLHYNMPPYATGETGRMGSPKRREIGHGRLAKRALAAMLPTPEEFAYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPMKAHVAGIAMGLIKEGKRFSVLTDILGDEDHLGDMDFKVAGTE 501          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A7C2YM17_9PROT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YM17_9PROT)

HSP 1 Score: 577 bits (1487), Expect = 4.450e-200
Identity = 291/379 (76.78%), Postives = 332/379 (87.60%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGS 1161
            N EVD D+ A++G+SAALAI+G+PFNGPIGAARVGY+DGQYVLNPT ++L +S+LDLVVAGT+QAVLMVESEA +L E+VMLGAVV+GH+QMQ  I+AIN++V +AG+P WDW     D+ LVARI   +E +L  A+QIKQKQARS  ID +W  +FAEL VG    P +  VKDI F LE+KIVR QIL GEPRIDGRDTRTVRPI+IRT VLPRAHGSALFTRGETQA+V ATLGT+RDEQ IDAL GEY +RFMLHYNMPPYATGETGRVG+PKRREIGHGRLAKRALLAVLP  E+FAY++RVVSEITESNGSSSMASVCGGCLSL+DAGVPLKAHVAGIAMGLIKEGN+FAVL+DILGDEDHLGDMDFKVAG+
Sbjct:  120 NSEVDSDVPAMIGASAALAISGIPFNGPIGAARVGYVDGQYVLNPTATELASSQLDLVVAGTQQAVLMVESEAKELPEDVMLGAVVYGHQQMQLVIEAINDMVEEAGRPLWDWNPPARDETLVARITELAERELNAAYQIKQKQARSGAIDEVWARVFAELGVGTESGPQASIVKDIGFALEAKIVRGQILNGEPRIDGRDTRTVRPISIRTGVLPRAHGSALFTRGETQALVTATLGTSRDEQIIDALQGEYRERFMLHYNMPPYATGETGRVGSPKRREIGHGRLAKRALLAVLPTPEEFAYSLRVVSEITESNGSSSMASVCGGCLSLMDAGVPLKAHVAGIAMGLIKEGNRFAVLSDILGDEDHLGDMDFKVAGT 498          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A1F4BH93_9PROT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BH93_9PROT)

HSP 1 Score: 577 bits (1487), Expect = 4.750e-200
Identity = 290/380 (76.32%), Postives = 333/380 (87.63%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            N E+D DI A++G+SAALA++G+PFNGPIGAARVGY++ QYVLNPT ++L  S+LDLVVAGT QAVLMVESEA +L E+VMLG+VVFGH+QMQ  I+ INEL  +AG   WDW    T++ L+ RIAA +ES LR AFQ+KQKQARS+ ID IWK +F E+ VG  G P +  VK+ICF LESKIVR QIL G+PRIDGR+TRTVRPI+IRT +LPRAHGSALFTRGETQAMV ATLGT+RDEQRIDAL GEYTDRFM+HYNMPPYATGETGRVG+PKRREIGHGRLAKRAL+A+LP  E FAY+MRVVSEITESNGSSSMASVCGGCL+L+DAGVPLKAHVAGIAMGLIKEGN+FAVL+DILGDEDHLGDMDFKVAG+E
Sbjct:  120 NNEIDSDIPAMIGASAALALSGIPFNGPIGAARVGYLNDQYVLNPTATELKTSQLDLVVAGTGQAVLMVESEAKELPEDVMLGSVVFGHQQMQPVIQMINELADEAGAQAWDWTPPATNETLIERIAALAESDLRAAFQLKQKQARSEAIDNIWKRVFNEVGVGTEGGPEANAVKEICFALESKIVRGQILNGDPRIDGRNTRTVRPISIRTGLLPRAHGSALFTRGETQAMVAATLGTSRDEQRIDALQGEYTDRFMMHYNMPPYATGETGRVGSPKRREIGHGRLAKRALIAMLPSPEAFAYSMRVVSEITESNGSSSMASVCGGCLALMDAGVPLKAHVAGIAMGLIKEGNRFAVLSDILGDEDHLGDMDFKVAGTE 499          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A431MMP8_9RHOO (Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A431MMP8_9RHOO)

HSP 1 Score: 576 bits (1485), Expect = 9.540e-200
Identity = 297/381 (77.95%), Postives = 333/381 (87.40%), Query Frame = 1
Query:   22 CNPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            CNPEVDPDI AL+G+SAALAI+G+PFNGPIGAARVGYIDGQYVLNP+K+QL +++LDLVVAGT  AVLMVESEA QL+EEVMLGAVVFGH+QMQ AI AINELV  AGKPEWDW+A   ++AL+A+I+  +E+ LRDA++I  KQAR+Q    I   + A L  GE  AP + TVK+  F LE+KIVRSQIL GEPRIDGRDTRTVRPIAIRT VLPR HGSALFTRGETQA+ VATLGT RDEQ IDAL GEY DRFMLHYNMPPYATGE GRVG+PKRREIGHGRLAKRAL+AVLP  E+F YTMRVVSEITESNGSSSMASVCGG L+L+DAGVPLKAHVAGIAMGLIK+GN+FAVLTDILGDEDHLGDMDFKVAG++
Sbjct:  120 CNPEVDPDIPALIGASAALAISGIPFNGPIGAARVGYIDGQYVLNPSKTQLQSTQLDLVVAGTAAAVLMVESEAQQLSEEVMLGAVVFGHDQMQLAINAINELVEAAGKPEWDWQAPAKNEALIAKISELAETDLRDAYRITSKQARTQKTREISSRVVAALTEGED-APDANTVKNYLFELEAKIVRSQILNGEPRIDGRDTRTVRPIAIRTGVLPRTHGSALFTRGETQALAVATLGTGRDEQIIDALQGEYRDRFMLHYNMPPYATGECGRVGSPKRREIGHGRLAKRALIAVLPSAEEFGYTMRVVSEITESNGSSSMASVCGGSLALMDAGVPLKAHVAGIAMGLIKDGNRFAVLTDILGDEDHLGDMDFKVAGTD 499          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A126SZ91_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=uncultured bacterium UPO33 TaxID=1776960 RepID=A0A126SZ91_9BACT)

HSP 1 Score: 575 bits (1481), Expect = 6.060e-199
Identity = 293/381 (76.90%), Postives = 332/381 (87.14%), Query Frame = 1
Query:   22 CNPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            CNPE+DPDI ALLG+SAALAI+G+PFNGPIGAARVGY+DG+Y+L PTK+QL +S+LDLVVAGT  AVLMVESEA QL+EE+MLGAVVFGHEQMQ AI+AINELV  AGKPEWDW+ AP ++AL+ R+   +E+ LR+A++I  KQAR+Q    I +   A L  G   AP + T+ +I F+LE+KIVR QIL GEPRIDGRDTRTVRPIAIR  VLPR HGSALFTRGETQA+VVATLGT RDEQ IDAL GEY DRFMLHYNMPPYATGETGRVG+PKRREIGHGRLAKRAL+AVLP  E+F Y+MRVVSEITESNGSSSMASVCGG L+L+DAGVPLKAHVAGIAMGLIKEGN+FAVLTDILGDEDHLGDMDFKVAG+E
Sbjct:  133 CNPEIDPDIPALLGASAALAISGIPFNGPIGAARVGYVDGKYILCPTKTQLESSQLDLVVAGTAAAVLMVESEAKQLSEEIMLGAVVFGHEQMQLAIQAINELVGVAGKPEWDWQPAPKNEALITRVIELAENDLREAYRITSKQARTQKTREIAQRTVAALTEGVDNAPDANTIGNILFDLEAKIVRGQILNGEPRIDGRDTRTVRPIAIRNGVLPRTHGSALFTRGETQALVVATLGTGRDEQIIDALQGEYRDRFMLHYNMPPYATGETGRVGSPKRREIGHGRLAKRALVAVLPATEEFGYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPLKAHVAGIAMGLIKEGNRFAVLTDILGDEDHLGDMDFKVAGTE 513          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A1F4A160_9PROT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F4A160_9PROT)

HSP 1 Score: 574 bits (1479), Expect = 8.520e-199
Identity = 289/381 (75.85%), Postives = 326/381 (85.56%), Query Frame = 1
Query:   22 CNPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            CN EVDPDI A+LG SAAL I+G+PFNGPIGAARVGYIDGQYVLNPT +QL  S+L+LVVAGTE AVLMVESEA QL+EEVMLG+VV+GH+QMQ+AI+AINEL   A KP WDWKA   D  LV RIA  +E  LR AF+I+QKQ RS  ID IWK +F E+ VG  G P +  VK+ CF LES+IVR+++L+GEPRIDGRDTRTVRPI  R  VLPR HGSALFTRGETQAMV+ATLGT RDEQ IDA+ GEY +RFMLHYNMPPYATGETGR+G PKRREIGHGRLAKRALLAVLP  E+FAY++RVVSE+TESNGSSSMA+VCG  L+L+DAGVP KAHVAGIAMGLIKEGN+FAVLTDILGDEDHLGDMDFKVAG+E
Sbjct:  121 CNSEVDPDIPAMLGVSAALTISGIPFNGPIGAARVGYIDGQYVLNPTSTQLKESQLNLVVAGTEHAVLMVESEAQQLSEEVMLGSVVYGHQQMQAAIRAINELSDLAAKPAWDWKAPEKDQNLVNRIAELAEEPLRQAFRIRQKQERSAAIDGIWKRVFGEIGVGTEGGPDANVVKETCFALESRIVRNRVLDGEPRIDGRDTRTVRPIGARVGVLPRTHGSALFTRGETQAMVIATLGTGRDEQIIDAIQGEYKERFMLHYNMPPYATGETGRMGAPKRREIGHGRLAKRALLAVLPAQEEFAYSIRVVSEVTESNGSSSMATVCGSSLALMDAGVPTKAHVAGIAMGLIKEGNRFAVLTDILGDEDHLGDMDFKVAGTE 501          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: A0A6L5JVI8_RHOTE (Polyribonucleotide nucleotidyltransferase n=3 Tax=Rhodocyclus TaxID=1064 RepID=A0A6L5JVI8_RHOTE)

HSP 1 Score: 572 bits (1475), Expect = 3.790e-198
Identity = 289/380 (76.05%), Postives = 337/380 (88.68%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE 1164
            NPE+DPDI AL+G+SAALAI+G+PFNGPIGAARVGY++GQYVLNPT SQ+  S+LDLVVAGT+ AVLMVESEA +L+E+VMLGAVVFGHEQMQ+AI AIN+LV +AGKPEW+W+AAP D+AL+AR+ A  E+ L++A++I  KQ RSQ +  I       L  G+  AP + T+K++ F++E+KIVRS+IL GEPRIDGRDTRTVRPI +R SVLPRAHGSALFTRGETQA+VVATLGT RDEQ IDAL GEY DRFMLHYNMPPYATGE GRVG+PKRREIGHGRLAKRAL+AVLPK EDF+YTMR+VSEITESNGSSSMASVCGG L+L+DAGVPLK+HVAGIAMGLIKEGN+FAVLTDILGDEDHLGDMDFKVAG++
Sbjct:  121 NPEIDPDIPALIGASAALAISGIPFNGPIGAARVGYLNGQYVLNPTLSQVKESQLDLVVAGTQSAVLMVESEAKELSEDVMLGAVVFGHEQMQAAINAINDLVEEAGKPEWEWEAAPRDEALIARLNALVEADLQEAYRITSKQQRSQRVKEIAANAVETLTAGDD-APDANTIKNLFFDIEAKIVRSRILAGEPRIDGRDTRTVRPICVRNSVLPRAHGSALFTRGETQALVVATLGTGRDEQIIDALAGEYRDRFMLHYNMPPYATGECGRVGSPKRREIGHGRLAKRALVAVLPKAEDFSYTMRIVSEITESNGSSSMASVCGGSLALMDAGVPLKSHVAGIAMGLIKEGNRFAVLTDILGDEDHLGDMDFKVAGTD 499          
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Match: UPI0019B6B8D0 (Polyribonucleotide nucleotidyltransferase n=2 Tax=Burkholderiales TaxID=80840 RepID=UPI0019B6B8D0)

HSP 1 Score: 570 bits (1470), Expect = 2.310e-197
Identity = 288/383 (75.20%), Postives = 337/383 (87.99%), Query Frame = 1
Query:   25 NPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYVLNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQMQSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQKQARSQTIDAIWKE----LFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILEGEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARDEQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGS 1161
            NPE+DPDIAA++G+SAAL+++G+PFNGP+GAARVGYIDGQYVLNPT +QL +S LDLVVAGTE AVLMVESEA QL+EEVMLGAVVFGH+QM++ I AI+ELV D GKPE +WK AP ++ L+AR+A F+E KLR+A+Q K KQAR+  +  +  E    L A+ +     AP    V +I F++E+KIVRSQIL+GEPRIDGRDTRTVRPI+IRT VLPR HGSALFTRGETQA+VVATLGTARDEQ+IDALMGEY+DRFMLHYNMPP+ATGETGRVGTPKRREIGHGRLAKRALLA LP  E+F+Y++R+VSEITESNGSSSMASVCGGCL+L+DAGVP++AHVAGIAMGLIKEG KFAVLTDILGDEDHLGDMDFKVAG+
Sbjct:  121 NPEIDPDIAAMIGASAALSVSGVPFNGPVGAARVGYIDGQYVLNPTTTQLKDSHLDLVVAGTESAVLMVESEAKQLSEEVMLGAVVFGHDQMKAVINAIHELVRDGGKPEVEWKPAPKNETLIARVAQFAEGKLREAYQTKDKQARTAKLKDVTAEVRAALAADAEAAGTTAPDGADVNNILFDIEAKIVRSQILDGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAALPPAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQAHVAGIAMGLIKEGGKFAVLTDILGDEDHLGDMDFKVAGT 503          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21312.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4DS31_9PROT1.890e-20277.63Polyribonucleotide nucleotidyltransferase n=3 Tax=... [more]
A0A521XAG8_9PROT7.470e-20276.84Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A537C2I5_9PROT1.610e-20076.64Polyribonucleotide nucleotidyltransferase n=8 Tax=... [more]
A0A7C2YM17_9PROT4.450e-20076.78Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A1F4BH93_9PROT4.750e-20076.32Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A431MMP8_9RHOO9.540e-20077.95Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A126SZ91_9BACT6.060e-19976.90Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A1F4A160_9PROT8.520e-19975.85Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A6L5JVI8_RHOTE3.790e-19876.05Polyribonucleotide nucleotidyltransferase n=3 Tax=... [more]
UPI0019B6B8D02.310e-19775.20Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21312contigP-wetherbeei_contig21312:4..1167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159087.Daro_2448
Preferred namepnp
PFAMsKH_1,PNPase,RNase_PH,RNase_PH_C,S1
Model size1164
Max annot lvl206389|Rhodocyclales
KEGG rclassRC02795
KEGG koko:K00962
KEGG ReactionR00437,R00438,R00439,R00440
KEGG Pathwayko00230,ko00240,ko03018,map00230,map00240,map03018
KEGG ModuleM00394
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.17e-198
EggNOG OGsCOG1185@1|root,COG1185@2|Bacteria,1MVB9@1224|Proteobacteria,2VI1P@28216|Betaproteobacteria,2KUVE@206389|Rhodocyclales
EC2.7.7.8
DescriptionInvolved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
Cds size1164
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186221.6720002-CDS-P-wetherbeei_contig21312:3..11671683186221.6720002-CDS-P-wetherbeei_contig21312:3..1167Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21312 4..1167 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21312.1.1prot_P-wetherbeei_contig21312.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21312 4..1167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21312.1.1

>prot_P-wetherbeei_contig21312.1.1 ID=prot_P-wetherbeei_contig21312.1.1|Name=mRNA_P-wetherbeei_contig21312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp
LRASTSPCNPEVDPDIAALLGSSAALAIAGLPFNGPIGAARVGYIDGQYV
LNPTKSQLVNSRLDLVVAGTEQAVLMVESEADQLNEEVMLGAVVFGHEQM
QSAIKAINELVVDAGKPEWDWKAAPTDDALVARIAAFSESKLRDAFQIKQ
KQARSQTIDAIWKELFAELKVGEPGAPSSQTVKDICFNLESKIVRSQILE
GEPRIDGRDTRTVRPIAIRTSVLPRAHGSALFTRGETQAMVVATLGTARD
EQRIDALMGEYTDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRAL
LAVLPKHEDFAYTMRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHV
AGIAMGLIKEGNKFAVLTDILGDEDHLGDMDFKVAGSE
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mRNA from alignment at P-wetherbeei_contig21312:4..1167-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21312.1.1 ID=mRNA_P-wetherbeei_contig21312.1.1|Name=mRNA_P-wetherbeei_contig21312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig21312:4..1167- (Phaeothamnion wetherbeei SAG_119_79)
CTGAGGGCTTCGACATCACCGTGCAATCCGGAAGTCGATCCGGACATTGC GGCCCTGTTGGGTTCGTCTGCCGCCCTGGCGATCGCAGGGTTGCCGTTCA ATGGTCCGATCGGCGCCGCGCGCGTCGGCTATATCGATGGCCAGTATGTA CTCAACCCCACCAAATCCCAGCTCGTCAACAGCCGCCTGGACCTGGTTGT AGCCGGTACCGAGCAGGCCGTGTTGATGGTCGAGTCCGAAGCGGACCAGC TCAACGAAGAGGTCATGCTGGGTGCGGTTGTGTTCGGCCACGAGCAGATG CAATCTGCCATCAAGGCGATCAATGAACTGGTGGTCGACGCTGGCAAACC GGAATGGGACTGGAAAGCCGCCCCGACCGACGACGCGCTGGTTGCACGGA TTGCCGCATTTTCCGAATCCAAGCTGCGCGACGCATTCCAGATCAAGCAG AAACAGGCGCGCTCGCAGACCATCGACGCGATCTGGAAGGAACTGTTCGC CGAATTGAAGGTTGGCGAGCCAGGGGCCCCGAGCAGCCAGACCGTCAAGG ATATCTGCTTCAACCTCGAATCGAAGATCGTGCGCTCGCAGATCCTCGAA GGCGAGCCGCGCATCGACGGCCGCGACACCCGCACCGTTCGTCCCATCGC GATCCGCACCTCGGTACTGCCGCGCGCCCACGGCTCCGCACTTTTCACCC GCGGTGAAACGCAGGCCATGGTTGTGGCCACCCTTGGCACCGCGCGCGAC GAACAGCGCATCGACGCGCTGATGGGCGAGTACACCGACCGTTTCATGCT CCACTACAACATGCCTCCTTATGCTACCGGTGAAACCGGCCGTGTTGGCA CGCCCAAGCGCCGCGAAATCGGTCATGGCCGTCTCGCCAAGCGCGCTTTG CTGGCAGTGTTGCCCAAGCATGAGGATTTCGCCTACACCATGCGTGTGGT GTCGGAAATCACCGAGTCGAATGGCTCGTCGTCGATGGCTTCGGTGTGTG GCGGCTGCCTGTCGCTGCTGGACGCCGGCGTGCCGCTGAAGGCGCACGTG GCCGGCATCGCCATGGGGTTGATCAAGGAGGGCAACAAGTTTGCCGTGCT CACCGACATTCTGGGCGACGAAGATCACCTCGGCGACATGGACTTCAAGG TGGCCGGTAGCGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21312:4..1167-

>mRNA_P-wetherbeei_contig21312.1.1 ID=mRNA_P-wetherbeei_contig21312.1.1|Name=mRNA_P-wetherbeei_contig21312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig21312:4..1167- (Phaeothamnion wetherbeei SAG_119_79)
CTGAGGGCTTCGACATCACCGTGCAATCCGGAAGTCGATCCGGACATTGC
GGCCCTGTTGGGTTCGTCTGCCGCCCTGGCGATCGCAGGGTTGCCGTTCA
ATGGTCCGATCGGCGCCGCGCGCGTCGGCTATATCGATGGCCAGTATGTA
CTCAACCCCACCAAATCCCAGCTCGTCAACAGCCGCCTGGACCTGGTTGT
AGCCGGTACCGAGCAGGCCGTGTTGATGGTCGAGTCCGAAGCGGACCAGC
TCAACGAAGAGGTCATGCTGGGTGCGGTTGTGTTCGGCCACGAGCAGATG
CAATCTGCCATCAAGGCGATCAATGAACTGGTGGTCGACGCTGGCAAACC
GGAATGGGACTGGAAAGCCGCCCCGACCGACGACGCGCTGGTTGCACGGA
TTGCCGCATTTTCCGAATCCAAGCTGCGCGACGCATTCCAGATCAAGCAG
AAACAGGCGCGCTCGCAGACCATCGACGCGATCTGGAAGGAACTGTTCGC
CGAATTGAAGGTTGGCGAGCCAGGGGCCCCGAGCAGCCAGACCGTCAAGG
ATATCTGCTTCAACCTCGAATCGAAGATCGTGCGCTCGCAGATCCTCGAA
GGCGAGCCGCGCATCGACGGCCGCGACACCCGCACCGTTCGTCCCATCGC
GATCCGCACCTCGGTACTGCCGCGCGCCCACGGCTCCGCACTTTTCACCC
GCGGTGAAACGCAGGCCATGGTTGTGGCCACCCTTGGCACCGCGCGCGAC
GAACAGCGCATCGACGCGCTGATGGGCGAGTACACCGACCGTTTCATGCT
CCACTACAACATGCCTCCTTATGCTACCGGTGAAACCGGCCGTGTTGGCA
CGCCCAAGCGCCGCGAAATCGGTCATGGCCGTCTCGCCAAGCGCGCTTTG
CTGGCAGTGTTGCCCAAGCATGAGGATTTCGCCTACACCATGCGTGTGGT
GTCGGAAATCACCGAGTCGAATGGCTCGTCGTCGATGGCTTCGGTGTGTG
GCGGCTGCCTGTCGCTGCTGGACGCCGGCGTGCCGCTGAAGGCGCACGTG
GCCGGCATCGCCATGGGGTTGATCAAGGAGGGCAACAAGTTTGCCGTGCT
CACCGACATTCTGGGCGACGAAGATCACCTCGGCGACATGGACTTCAAGG
TGGCCGGTAGCGAA
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