mRNA_P-wetherbeei_contig1006.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1006.3.1
Unique NamemRNA_P-wetherbeei_contig1006.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A835Z480_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z480_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.920e-97
Identity = 168/321 (52.34%), Postives = 203/321 (63.24%), Query Frame = 2 
Query: 1913 LPYRPRGGAERFFCPSSSVPWLGAGLCPMDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRRERGELCPFVLILNFSLPWGSFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAPDFDIWEARP 2875
            +P +   G +RF CP++++  L  G     E  NCWEEP   TF VRG  Y+ DGKKV S EAAY+LLG+DLL+S + HH V +R  GFVQRFRR+ G  CPFVL+LNFSLPWGSF+AY  PR+GG +P++GD  FD L++R++E  S                                            G A         FRN+RLKI+PRCH GPWLVR TVGGKPAIIG KI Q Y  G   G+FE+ TD+ SS AALYIL VVKNYT  V+VDLGFVIQG+  EELPERL+GA+RFHHLDVAGA  F+ WE+RP
Sbjct:   13 IPDKAPVGQDRFNCPATAIDKLEPG----GELSNCWEEPTSETFMVRGKQYLKDGKKVVSQEAAYMLLGVDLLLSADQHHHVAARPGGFVQRFRRKAGPSCPFVLVLNFSLPWGSFIAYFAPRNGGTTPYIGDPCFDALMKRVIEDDSE-------------------------------------------GSA---------FRNSRLKIIPRCHDGPWLVRSTVGGKPAIIGTKITQEYFSG--SGYFEVVTDVCSSTAALYILGVVKNYTKVVSVDLGFVIQGETEEELPERLIGAVRFHHLDVAGALSFESWESRP 275
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A7S3XYF9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYF9_HETAK)

HSP 1 Score: 164 bits (414), Expect = 9.210e-42
Identity = 89/278 (32.01%), Postives = 135/278 (48.56%), Query Frame = 2 
Query: 2078 KKVPSAEAAYVLLGIDLLVSEETHHQ----------VGSRENGFVQRFRRERGELCPFVLILNFSLPWGSFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAPDFDIWEARPPD 2881
            +K P+  +AY+LLG +L                   +     GFV R R   G   PFV ++NF LP+G+++ YL PR+G  SP++GD  FD  ++R + G                                                        D FRN+R K++ RC  GPW+V++T  G+PA+IG K+KQ Y  G  DG+FE+  D +SS  A   L + + Y +++ +D+ ++IQG+G +ELPERL+G +R+H +D+  A     W ARP D
Sbjct:   11 RKAPNGPSAYLLLGCELXXXXXXXXXXXXXXAPQTCISDDPQGFVARARARAGAQTPFVFVINFVLPFGNYVTYLSPRNGSTSPYIGDLTFDTTMKRFMTG-------------------------------------------------------DDSFRNSRFKMIARCLEGPWVVKKTANGRPALIGQKVKQQYFEG--DGFFEVSIDNSSSKTAATCLKMCQKYASSIVMDMVYLIQGEGDDELPERLLGGMRWHRIDLRAAWPAADWAARPTD 231
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A7S3XY80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY80_HETAK)

HSP 1 Score: 141 bits (356), Expect = 2.630e-32
Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 2 
Query: 2513 GPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAPDFDIWEARPPD 2881
            G D +RN R+KI+PRC  GPW+VR  VG  PAI+G KI+Q Y+      +FE+E ++ SS AA  ILA VK++T  V++DL FV+QG+   ELPER++G LRF+ LDVAGAP  + WE+RPPD
Sbjct:  225 GTDEYRNRRMKIIPRCIEGPWVVRTAVGQTPAIMGTKIQQNYYS--TKEYFELEVNVQSSKAAGTILAAVKSFTKLVSIDLAFVLQGENEAELPERILGCLRFYKLDVAGAPPSEEWESRPPD 345
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: D0NDN7_PHYIT (EDR2_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NDN7_PHYIT)

HSP 1 Score: 137 bits (345), Expect = 2.530e-31
Identity = 91/291 (31.27%), Postives = 127/291 (43.64%), Query Frame = 2 
Query: 1994 PMDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRR---ERGELCPFVLILNFSLPWGS----FLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGA 2845
            P + P + W EP G    VRG  Y+ D +K+PS    + L+G+DL  S E    + SR +  VQR  R   E+G   PF  ++NF +P        L Y  P    PS          L+   LEG                                                        D FRN R K++P    G ++VRQ VG  PA+IG K++Q Y  G    +FE++ DI SS  A  ++ +V  YT  + +D+GFV++G  PEELPERL G  R  H+D++ A
Sbjct:  131 PSNVPRSMWAEPDGAAMMVRGPDYITDRRKIPSQSPFFRLVGLDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVVNFVVPGNPRINLVLYYQVPH---PSILTDGSPSSELMADFLEGS-------------------------------------------------------DEFRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFRGKQ--YFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNPEELPERLFGTCRLVHIDLSVA 361
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A662YG75_9STRA (EDR2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YG75_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.110e-31
Identity = 91/291 (31.27%), Postives = 130/291 (44.67%), Query Frame = 2 
Query: 1994 PMDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRR---ERGELCPFVLILNFSLPWGS----FLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGA 2845
            P + P   W EP G    VRG  Y+ D +K+PS   A+ L+G+DL  S E    + SR +  VQR  +   E+G   PF  ++NF +P        L Y  P    PS       F  L+   LEG                                                        D FRN R K++P    G ++VRQ VG  PA+IG K++Q Y  G    +FE++ DI SS  A  ++ +V  YT  + +D+GFV++G  P+ELPERL+G++R  H+D+  A
Sbjct:  418 PSNVPRAMWAEPDGAAVMVRGPDYLTDRRKIPSQAPAFRLMGVDLFESSEAVEHIASRPDNAVQRELKRHAEQGTEMPFTFVINFVVPGNPRINMVLYYQAPH---PSVLADGSPFAELMADFLEGS-------------------------------------------------------DEFRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFRGTQ--YFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQSPDELPERLMGSVRLVHIDLGVA 648
[Close]
BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A7S2TU56_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TU56_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 9.780e-31
Identity = 94/290 (32.41%), Postives = 131/290 (45.17%), Query Frame = 2 
Query: 2000 DEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRRERGE---LCPF---VLILNFSLPWGSFLAYLCPR-HGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAP 2848
            + P +C+ +P    FK+RG  Y+ D  KV S E+ + L   +L   E+T   V + ++  +   RRE        P+    LIL F LP  SF  Y+  R    P+   G  +F    RR +EG                                                        D FRN R KIVP  + G W+VRQ VGGKPA++G KI   YH G  + + EI+ D++SS  A  IL VV      + VDLGF+I+G   +ELPE ++GA+RFHH+D+   P
Sbjct:   47 ENPLDCFSQPESKKFKLRGPNYLNDRVKVNSEESRFSLECCELYSVEKTLDHVATMKHSALHNLRREWAHPEGSNPYPIKFLILQFQLPGMSFTMYMKARVDQDPAEAPGYLEF---FRRFVEGS-------------------------------------------------------DEFRNERFKIVPTVNVGSWIVRQVVGGKPALLGRKIDCKYHRG--EDYLEIDVDVSSSYIAQNILGVVTGACKTLQVDLGFLIEGRSKDELPEVMIGAVRFHHVDLEAIP 276
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BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: K3W5F2_GLOUD (START domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5F2_GLOUD)

HSP 1 Score: 139 bits (350), Expect = 1.320e-30
Identity = 91/294 (30.95%), Postives = 134/294 (45.58%), Query Frame = 2 
Query: 1994 PMDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRR---ERGELCPFVLILNFSLPWG---SFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAPDFD 2857
            P + P + W EP G T  VRG  Y+ D +K+PSA  A+ L+GIDL  S  +   + SR +  VQ+  +   E+G   PF  ++NF +P     S + Y    H  PS       F +L+   LEG                                                        D FR+ R K++P    G ++VRQ VG  PAI+G K++Q Y+ G    +FE++ DI SS  A  ++ +V  YT  + +D+GF+I+G   +ELPERL G+ R  H+D+  A   D
Sbjct:  328 PCNVPRSMWAEPDGGTVLVRGPDYLTDRRKIPSAPPAFRLVGIDLFNSSSSIEHIASRPDNVVQKELKRHEEQGTEMPFTFVINFVVPGNPCISLVLYYQAPH--PSVLTDGSPFADLMADFLEG-------------------------------------------------------TDEFRDERFKLIPCIVEGSFIVRQAVGSTPAIVGKKLRQPYYHGKQ--YFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFLIEGQRSDELPERLFGSCRLVHIDLGIAAKLD 562
[Close]
BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A7S3YNW0_9EUKA (Hypothetical protein n=5 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YNW0_9EUKA)

HSP 1 Score: 137 bits (346), Expect = 7.690e-30
Identity = 90/288 (31.25%), Postives = 133/288 (46.18%), Query Frame = 2 
Query: 2006 PFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRRERGE---LCPF---VLILNFSLPWGSFLAYLCPRHG-GPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAP 2848
            P NCW +PA   FK+RG  Y+ D  K+ S ++ +     +L  + +T + V S E+  + + R+E        PF    LI+ F LP  ++  Y+  R G  P+   G   + +  ++ +EG                                                       PD FRN R KIVP  + G W+V+Q VGGKPA++G KI+  YH G    + EI+ DI+SS  A  IL+VV      + +DLGF+I+G    ELPE ++GA RFHH+D+   P
Sbjct:  395 PLNCWSQPASYIFKLRGPNYLNDHVKINSEQSRFTTECNELYKTAQTLNHVASMEHSAIHKLRKEWSHPEGSNPFPIKFLIIQFQLPGMTYTTYMKARVGQSPAKASG---YTDFFKKFVEG-------------------------------------------------------PDDFRNERFKIVPIVNVGSWIVKQVVGGKPALLGRKIECKYHKGT--DYLEIDVDISSSYVAQNILSVVSGSCKTLQIDLGFLIEGRCAAELPEVMIGATRFHHVDLEDIP 622
[Close]
BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A0P1ARH6_PLAHL (START-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARH6_PLAHL)

HSP 1 Score: 137 bits (345), Expect = 1.050e-29
Identity = 89/291 (30.58%), Postives = 126/291 (43.30%), Query Frame = 2 
Query: 1994 PMDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRR---ERGELCPFVLILNFSLPW----GSFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGA 2845
            P + P   W EP G    VRG  Y+ D +K+PS    + L+G+DL  S E    + SR +  +QR  R   ERG   PF  I+NF +P        L Y  P    PS          L+   L G                                                        D FRN R K++P    G ++VRQ VG  P+++G K++Q YH G    +FE++ DI SS  A  ++ +V  YT  + +D+GFV++G  P+ELPERL G  R  H+D++ A
Sbjct:  393 PSNVPRTMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEVIEHIASRADNTIQRELRRHEERGTEMPFTFIVNFVVPGTPRINLVLYYQVPH---PSVLTDGSPSSELMADFLNGS-------------------------------------------------------DEFRNERFKLIPCIVEGSFIVRQAVGSTPSLVGKKLRQPYHRGKQ--YFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNPDELPERLFGTCRLVHIDLSVA 623
[Close]
BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Match: A0A7S2URM0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URM0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 7.340e-29
Identity = 96/290 (33.10%), Postives = 135/290 (46.55%), Query Frame = 2 
Query: 1997 MDEPFNCWEEPAGPTFKVRGLTYMADGKKVPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRRERGELCPFVLILNFSLPWGSFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEASGGTGGPDFFRNNRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADG----WFEIETDINSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLDVAGAPDF 2854
            + E FNCW  P    F VRG  Y+ D KKV S    + + G+DL ++++    VG     F  R R    E+  F+L  NF LPWG  + Y       PS F+   ++         G   S ++   G+                                          G D ++N RLKIVP    GPW+V+  VGGKPAIIG K+   Y    A+G    + E + DI +S AA  IL+VV++YT+ + +DLGFVIQ +  +ELPE+++ A R H +D   AP F
Sbjct:  437 LGEHFNCWSTPLYSDFNVRGSLYLKDKKKVSSGPYLFPMRGVDLFLTDDCPANVGRHPLMFGGRLR----EVSTFIL--NFRLPWGVLVFY----SEIPSKFLPFLRYGYETPNKKSGRQPSMENMTPGERALCLFLM----------------------------------GDDDYKNERLKIVPNVIEGPWVVKTVVGGKPAIIGKKMPVTYVYQPAEGTQAAYLEADFDIVASSAARKILSVVRSYTSILTLDLGFVIQSNKTDELPEQMLVAPRMHGIDPFSAPSF 682
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1006.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z480_9STRA1.920e-9752.34EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3XYF9_HETAK9.210e-4232.01Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XY80_HETAK2.630e-3254.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D0NDN7_PHYIT2.530e-3131.27EDR2_C domain-containing protein n=2 Tax=Phytophth... [more]
A0A662YG75_9STRA3.110e-3131.27EDR2_C domain-containing protein n=2 Tax=Nothophyt... [more]
A0A7S2TU56_9EUKA9.780e-3132.41Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
K3W5F2_GLOUD1.320e-3030.95START domain-containing protein n=1 Tax=Globispora... [more]
A0A7S3YNW0_9EUKA7.690e-3031.25Hypothetical protein n=5 Tax=Lotharella globosa Ta... [more]
A0A0P1ARH6_PLAHL1.050e-2930.58START-like domain n=1 Tax=Plasmopara halstedii Tax... [more]
A0A7S2URM0_9STRA7.340e-2933.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1006contigP-wetherbeei_contig1006:3938..8168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T000193
PFAMsDUF1336,START
Model size3503
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.06e-31
EggNOG OGs2CMSQ@1|root,2QRRZ@2759|Eukaryota,1MAR7@121069|Pythiales
Descriptiondomain-containing protein. Source PGD
Cds size2754
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.5257905-UTR-P-wetherbeei_contig1006:3937..40701683185852.5257905-UTR-P-wetherbeei_contig1006:3937..4070Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1006 3938..4070 +
1683185852.566651-UTR-P-wetherbeei_contig1006:7552..81681683185852.566651-UTR-P-wetherbeei_contig1006:7552..8168Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1006 7553..8168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.536353-CDS-P-wetherbeei_contig1006:4070..60921683185852.536353-CDS-P-wetherbeei_contig1006:4070..6092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1006 4071..6092 +
1683185852.5465605-CDS-P-wetherbeei_contig1006:6540..70171683185852.5465605-CDS-P-wetherbeei_contig1006:6540..7017Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1006 6541..7017 +
1683185852.5564427-CDS-P-wetherbeei_contig1006:7297..75521683185852.5564427-CDS-P-wetherbeei_contig1006:7297..7552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1006 7298..7552 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1006.3.1prot_P-wetherbeei_contig1006.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1006 4071..7552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1006.3.1

>prot_P-wetherbeei_contig1006.3.1 ID=prot_P-wetherbeei_contig1006.3.1|Name=mRNA_P-wetherbeei_contig1006.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=918bp
MKRLRSMRSGAKKNAISLERIKEAATAGNFSDSESDGESKWNLRRHVSII
RKMKLLSRVRDLPTHMCLPDLSADRQAVANRPLEPNVFVDRDVIDRIVNL
AAWAGYECCCQQIRIRLPRTARDPPMQGSQSGAAATEASEGAGAAAAAAG
ANGNGYAPPAESGPLPLNGHIPALGREDNSIGVLGCGILCHLLYRHHAVN
NFLPLSPRPGAANAAVAVDDESTDDEDLFFHDAEFDGSESGDISLREANG
PAAVAANGAASVTAPSKGNSAEEAAAAAAADEAGEATAAGLAAAAGANGA
AAAGANVAAAAAAAHAERADGAPRSRGSSTSGDSDDASFEAALSNGSESA
FGEGEEDQFQDACDRAPSPVPSSSNGCGGRTSVGGGGGWGRRSRSASPRL
PVAWRVTFIVQGRPYVAEVWHRTTAPVCCLLGEVLRVATLVDGSELSWSP
TKVTLVDAVTGAGVAFTDELSRPGQLPFPPGGSGSGGGENVGGGGSVRQP
VLRVVICAADRKELRNSLLEADGEDTMPQDVYDSLPPELKRSLEERRQRE
QQQLRRPGCVGGVGGRSSHAPYRSGEGTRNDAGGDAAAAERPPLPYRPRG
GAERFFCPSSSVPWLGAGLCPMDEPFNCWEEPAGPTFKVRGLTYMADGKK
VPSAEAAYVLLGIDLLVSEETHHQVGSRENGFVQRFRRERGELCPFVLIL
NFSLPWGSFLAYLCPRHGGPSPFVGDEKFDNLLRRILEGGSSSGKDGGNG
DGGGGSGGNTGGGDADGGSGGNTGGGDADGGSGGSGEASGGTGGPDFFRN
NRLKIVPRCHAGPWLVRQTVGGKPAIIGNKIKQVYHGGVADGWFEIETDI
NSSMAALYILAVVKNYTTAVAVDLGFVIQGDGPEELPERLVGALRFHHLD
VAGAPDFDIWEARPPDT*
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mRNA from alignment at P-wetherbeei_contig1006:3938..8168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1006.3.1 ID=mRNA_P-wetherbeei_contig1006.3.1|Name=mRNA_P-wetherbeei_contig1006.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4231bp|location=Sequence derived from alignment at P-wetherbeei_contig1006:3938..8168+ (Phaeothamnion wetherbeei SAG_119_79)
GGGAGATAACGCCCTGAGAACTCCCTCTCTTCCTCTCGGCATCATTGACC
CGTTAAATTCGTAAATCCCGGCCTTGGACATTCTCAGAGGTCCTACTCTT
GCTAAAATTCCCGTTCTCTCTTGGATATAGCGAATGAAGCGCCTCCGTTC
GATGCGCTCCGGCGCAAAGAAGAATGCCATATCCCTGGAGAGGATTAAAG
AGGCGGCGACGGCCGGAAATTTCTCTGATTCGGAGAGCGACGGCGAGTCG
AAGTGGAATCTGCGCCGTCACGTTTCTATTATTCGAAAGATGAAGCTTTT
GAGCAGGGTTCGGGACCTGCCGACGCATATGTGTCTCCCAGATCTCAGCG
CGGATCGCCAGGCGGTCGCGAACAGACCCTTAGAGCCCAATGTCTTCGTT
GACCGGGATGTCATCGATCGCATCGTCAACTTGGCGGCTTGGGCAGGCTA
CGAGTGCTGCTGCCAGCAAATACGAATTCGCCTGCCGCGCACAGCAAGAG
ACCCCCCAATGCAGGGGTCACAATCTGGAGCGGCCGCGACGGAGGCGTCT
GAAGGAGCAGGTGCAGCCGCAGCAGCAGCGGGGGCCAACGGCAACGGGTA
TGCCCCTCCGGCAGAAAGCGGACCACTCCCGTTGAACGGGCACATCCCGG
CTTTGGGACGCGAGGACAACAGCATCGGCGTGCTGGGATGCGGCATTCTC
TGCCACCTGCTGTACCGGCACCATGCCGTGAACAACTTTTTACCGCTGTC
GCCGCGGCCCGGCGCGGCCAATGCTGCGGTCGCGGTCGACGACGAGAGCA
CCGACGACGAAGATTTGTTTTTTCACGACGCAGAGTTCGACGGAAGCGAG
TCTGGCGACATTTCCCTGAGGGAAGCAAACGGCCCGGCAGCAGTTGCAGC
GAACGGGGCGGCGAGTGTTACCGCGCCGTCGAAAGGCAACAGTGCGGAAG
AAGCAGCAGCAGCAGCAGCAGCAGACGAAGCAGGAGAAGCGACGGCGGCG
GGTCTGGCGGCGGCAGCAGGGGCCAACGGGGCGGCGGCAGCAGGGGCCAA
CGTGGCGGCGGCGGCAGCGGCTGCACACGCAGAAAGGGCAGATGGGGCAC
CAAGAAGTCGCGGAAGCAGCACCAGCGGCGACAGCGACGACGCGTCCTTT
GAAGCCGCCCTCTCCAACGGCAGCGAGAGCGCATTTGGCGAAGGGGAGGA
GGACCAATTTCAGGATGCTTGCGACCGCGCGCCCTCCCCCGTGCCCAGCA
GCAGCAACGGCTGCGGCGGCAGGACCAGCGTCGGCGGCGGCGGCGGCTGG
GGACGGCGGAGCCGCAGCGCGTCCCCGCGGCTGCCAGTGGCGTGGCGGGT
GACGTTTATCGTCCAGGGCCGTCCATACGTCGCGGAGGTGTGGCACCGCA
CGACGGCCCCCGTCTGCTGTCTCCTGGGGGAGGTGCTGCGGGTGGCGACG
CTCGTCGACGGCAGCGAGCTCAGTTGGAGCCCCACCAAGGTCACTCTGGT
GGACGCGGTGACCGGCGCCGGCGTCGCCTTCACCGACGAGCTTTCGCGGC
CGGGCCAGCTGCCGTTTCCACCCGGCGGCAGCGGCAGCGGTGGTGGCGAG
AACGTTGGTGGCGGCGGCTCAGTGCGGCAGCCGGTGCTGCGGGTGGTGAT
TTGCGCCGCCGACCGCAAGGAGTTGCGCAACAGCCTACTGGAAGCGGACG
GCGAGGACACCATGCCGCAGGACGTCTACGACTCGCTGCCGCCGGAGCTC
AAGCGGTCGCTGGAGGAGCGACGGCAGCGGGAGCAGCAGCAGCTGCGGCG
GCCCGGTTGCGTCGGCGGCGTCGGCGGCCGCAGCAGCCACGCGCCATACC
GCAGCGGCGAAGGCACCAGGAACGACGCTGGCGGTGACGCCGCGGCAGCG
GAGCGTCCGCCGCTGCCGTACCGGCCGCGCGGCGGCGCGGAGCGCTTCTT
CTGCCCTTCGAGCAGCGTACCGTGGCTGGGGGCTGGCCTGTGTCCCATGG
ACGAGCCGTTCAACTGCTGGGAGGAGCCGGCGGGGCCGACGTTCAAGGTG
CGCGGGCTGACGTACATGGCGGACGGCAAGAAGGTGCCGTCGGCGGAGGC
GGCGTATGTGCTGCTCGGCATCGACCTTCTCGTGTCGGAGGAGACGCACC
ACCAGGTCAGTCCAGCCTGGCAGGCAGCGTTTGTGTGTCGTCTGTTCGTC
CATTGGGGGGAAAGGGGTCAGGAAGGGGAATTGGGGCTCAAGCGATTAAA
TGGGGCTTTGGTGTTACAGTGGCCGGAGCAAGAAAGGTATTTCACTACCT
GGGGCTCTTTTACGTTGACAAAAGGAACGGTAGGGCAGGGAAGAGGCTGA
TCTGCAAAGAACGCCGAATTGTTGCCAACCAAACTTTCTGTTCAACATCT
CCTGTTTCGACTGAGTGTCTCATTACTACATTCATTCTTATCAGAGTTCC
TGCTCTTTGCTCCACGACTGGAAAAATACTTTGCTCGCTTCACTGCGTCA
CGCTCATCTCCAACTCTTACAAACGGATTTGGTGTCTTTTTCCTTCCCTT
CCTTCCCGCGTCCTTTTCTTCGCTTCGCTCCGGCCCGGCCATTCCATCCA
CAGGTAGGCTCGCGGGAGAACGGCTTCGTGCAGCGGTTCCGGCGGGAGCG
TGGGGAGTTGTGCCCCTTCGTGCTGATCCTCAACTTTTCGCTGCCGTGGG
GCAGCTTTTTGGCGTACCTCTGCCCGCGCCATGGCGGCCCTTCCCCGTTC
GTCGGCGACGAAAAGTTCGACAATCTCCTGCGCCGTATTCTCGAGGGCGG
CAGCAGCAGTGGCAAAGATGGTGGCAACGGCGACGGCGGTGGCGGCAGCG
GCGGCAATACCGGTGGGGGCGATGCTGACGGCGGCAGCGGCGGCAATACC
GGTGGGGGCGATGCTGACGGCGGCAGCGGCGGCAGCGGCGAGGCTAGCGG
CGGCACGGGAGGGCCGGACTTCTTTCGGAATAACCGGCTGAAGATCGTGC
CGCGGTGTCATGCCGGCCCATGGCTAGTGAGGCAGACGGTTGGCGGCAAG
CCGGCAATAATCGGGAACAAGATCAAGCAGGTGCGTTGGTTCTCCAACGG
CGTCGGTTTATTGATTGAGTCCTTGTCTTTCCTGTTTTTGGAAGCTGGGC
ATGCAAGTGTAGCCCTGCAGTTGGCCGGCATCAAAGTCACTTGACCCTTT
TCTTGGCCTTGATTTCTCACTCTGGGAACGCATCGTACCGGGACAGCACC
AGAAACAAGGTTCATGGGGGTATTTCTGGCACCTACCGGTTTTGTAAATG
CTCCCTCCTTCCCTTCCGCTCCCTTTCCCTCCTCCCCCTTCTGATCCCCC
CTTCCCTCAGGTATACCACGGCGGCGTCGCCGACGGGTGGTTCGAAATCG
AGACAGACATCAATTCGTCGATGGCGGCCCTCTACATCCTGGCCGTGGTC
AAGAACTACACGACGGCCGTGGCGGTGGACCTCGGCTTCGTCATCCAGGG
CGACGGCCCCGAGGAGCTACCCGAGCGGCTCGTCGGTGCCCTCCGTTTCC
ACCACCTCGACGTTGCCGGCGCGCCCGACTTTGACATCTGGGAGGCCCGC
CCGCCCGACACATGACTGCATTGCTATGCAGGGCGAGCGATCAAGGCGGA
AGGATGGAGGGAGGCGGGTGCATGGATGGCAGGACGGGACGGGACAGGAC
GGGACGGGACGGGACGGGACGGGACGGGACGGGACGAGATGGGACGAGAC
GGAAGCAAAGGCAGAAGTCCGGGGAGGAAGATGGATGTGTATCTATAGGT
GGATTTGGCTGGCATGAACGCTGGCGTCACTTGTCTGATTCTGAGGTTGA
GTTTTGCAGCTAGATATTTTTTGACGAGGCACGTGCGTGCTGGCTTGCGG
CATCGGATCGTCAGCAGATTAATTTGACTGGGGTCGGAAGAAGTGCAGCG
TGCCTGGGAGGAGAACAGCCGGCATGGCAATCCCGTGCCTAACAGGAAGC
AAGCGCTTCCGCTACACAAATGAGCCGCGGCGAAAAAGTACAATAGTAGT
CTATAGGCGGATACATTTTGGGGAACGACCCGGGCCTCGGAGAAGGGAAT
AATTTCCTTTGCCCTCGGCGCTTGGGCCTCCTGCCCATGCCGTTTGGCAA
TTTTTTTGGGTACCGCATTCGTTGTCAATTTTTGTCCCATATTTCGAACG
AAAGCTGTATTGAGATCCTCTTTGCAAGGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1006:3938..8168+

>mRNA_P-wetherbeei_contig1006.3.1 ID=mRNA_P-wetherbeei_contig1006.3.1|Name=mRNA_P-wetherbeei_contig1006.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2754bp|location=Sequence derived from alignment at P-wetherbeei_contig1006:3938..8168+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCGCCTCCGTTCGATGCGCTCCGGCGCAAAGAAGAATGCCATATC
CCTGGAGAGGATTAAAGAGGCGGCGACGGCCGGAAATTTCTCTGATTCGG
AGAGCGACGGCGAGTCGAAGTGGAATCTGCGCCGTCACGTTTCTATTATT
CGAAAGATGAAGCTTTTGAGCAGGGTTCGGGACCTGCCGACGCATATGTG
TCTCCCAGATCTCAGCGCGGATCGCCAGGCGGTCGCGAACAGACCCTTAG
AGCCCAATGTCTTCGTTGACCGGGATGTCATCGATCGCATCGTCAACTTG
GCGGCTTGGGCAGGCTACGAGTGCTGCTGCCAGCAAATACGAATTCGCCT
GCCGCGCACAGCAAGAGACCCCCCAATGCAGGGGTCACAATCTGGAGCGG
CCGCGACGGAGGCGTCTGAAGGAGCAGGTGCAGCCGCAGCAGCAGCGGGG
GCCAACGGCAACGGGTATGCCCCTCCGGCAGAAAGCGGACCACTCCCGTT
GAACGGGCACATCCCGGCTTTGGGACGCGAGGACAACAGCATCGGCGTGC
TGGGATGCGGCATTCTCTGCCACCTGCTGTACCGGCACCATGCCGTGAAC
AACTTTTTACCGCTGTCGCCGCGGCCCGGCGCGGCCAATGCTGCGGTCGC
GGTCGACGACGAGAGCACCGACGACGAAGATTTGTTTTTTCACGACGCAG
AGTTCGACGGAAGCGAGTCTGGCGACATTTCCCTGAGGGAAGCAAACGGC
CCGGCAGCAGTTGCAGCGAACGGGGCGGCGAGTGTTACCGCGCCGTCGAA
AGGCAACAGTGCGGAAGAAGCAGCAGCAGCAGCAGCAGCAGACGAAGCAG
GAGAAGCGACGGCGGCGGGTCTGGCGGCGGCAGCAGGGGCCAACGGGGCG
GCGGCAGCAGGGGCCAACGTGGCGGCGGCGGCAGCGGCTGCACACGCAGA
AAGGGCAGATGGGGCACCAAGAAGTCGCGGAAGCAGCACCAGCGGCGACA
GCGACGACGCGTCCTTTGAAGCCGCCCTCTCCAACGGCAGCGAGAGCGCA
TTTGGCGAAGGGGAGGAGGACCAATTTCAGGATGCTTGCGACCGCGCGCC
CTCCCCCGTGCCCAGCAGCAGCAACGGCTGCGGCGGCAGGACCAGCGTCG
GCGGCGGCGGCGGCTGGGGACGGCGGAGCCGCAGCGCGTCCCCGCGGCTG
CCAGTGGCGTGGCGGGTGACGTTTATCGTCCAGGGCCGTCCATACGTCGC
GGAGGTGTGGCACCGCACGACGGCCCCCGTCTGCTGTCTCCTGGGGGAGG
TGCTGCGGGTGGCGACGCTCGTCGACGGCAGCGAGCTCAGTTGGAGCCCC
ACCAAGGTCACTCTGGTGGACGCGGTGACCGGCGCCGGCGTCGCCTTCAC
CGACGAGCTTTCGCGGCCGGGCCAGCTGCCGTTTCCACCCGGCGGCAGCG
GCAGCGGTGGTGGCGAGAACGTTGGTGGCGGCGGCTCAGTGCGGCAGCCG
GTGCTGCGGGTGGTGATTTGCGCCGCCGACCGCAAGGAGTTGCGCAACAG
CCTACTGGAAGCGGACGGCGAGGACACCATGCCGCAGGACGTCTACGACT
CGCTGCCGCCGGAGCTCAAGCGGTCGCTGGAGGAGCGACGGCAGCGGGAG
CAGCAGCAGCTGCGGCGGCCCGGTTGCGTCGGCGGCGTCGGCGGCCGCAG
CAGCCACGCGCCATACCGCAGCGGCGAAGGCACCAGGAACGACGCTGGCG
GTGACGCCGCGGCAGCGGAGCGTCCGCCGCTGCCGTACCGGCCGCGCGGC
GGCGCGGAGCGCTTCTTCTGCCCTTCGAGCAGCGTACCGTGGCTGGGGGC
TGGCCTGTGTCCCATGGACGAGCCGTTCAACTGCTGGGAGGAGCCGGCGG
GGCCGACGTTCAAGGTGCGCGGGCTGACGTACATGGCGGACGGCAAGAAG
GTGCCGTCGGCGGAGGCGGCGTATGTGCTGCTCGGCATCGACCTTCTCGT
GTCGGAGGAGACGCACCACCAGGTAGGCTCGCGGGAGAACGGCTTCGTGC
AGCGGTTCCGGCGGGAGCGTGGGGAGTTGTGCCCCTTCGTGCTGATCCTC
AACTTTTCGCTGCCGTGGGGCAGCTTTTTGGCGTACCTCTGCCCGCGCCA
TGGCGGCCCTTCCCCGTTCGTCGGCGACGAAAAGTTCGACAATCTCCTGC
GCCGTATTCTCGAGGGCGGCAGCAGCAGTGGCAAAGATGGTGGCAACGGC
GACGGCGGTGGCGGCAGCGGCGGCAATACCGGTGGGGGCGATGCTGACGG
CGGCAGCGGCGGCAATACCGGTGGGGGCGATGCTGACGGCGGCAGCGGCG
GCAGCGGCGAGGCTAGCGGCGGCACGGGAGGGCCGGACTTCTTTCGGAAT
AACCGGCTGAAGATCGTGCCGCGGTGTCATGCCGGCCCATGGCTAGTGAG
GCAGACGGTTGGCGGCAAGCCGGCAATAATCGGGAACAAGATCAAGCAGG
TATACCACGGCGGCGTCGCCGACGGGTGGTTCGAAATCGAGACAGACATC
AATTCGTCGATGGCGGCCCTCTACATCCTGGCCGTGGTCAAGAACTACAC
GACGGCCGTGGCGGTGGACCTCGGCTTCGTCATCCAGGGCGACGGCCCCG
AGGAGCTACCCGAGCGGCTCGTCGGTGCCCTCCGTTTCCACCACCTCGAC
GTTGCCGGCGCGCCCGACTTTGACATCTGGGAGGCCCGCCCGCCCGACAC
ATGA
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