mRNA_P-wetherbeei_contig21284.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21284.1.1
Unique NamemRNA_P-wetherbeei_contig21284.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A7C2QQ32_9HYPH (DNA ligase (ATP) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QQ32_9HYPH)

HSP 1 Score: 529 bits (1362), Expect = 2.380e-183
Identity = 249/356 (69.94%), Postives = 290/356 (81.46%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVE 1068
            H L+PPY PLF WL G GP+PD++  PVFRP+MLSH L+E+D + L + D+  EWKWDGIRVQ+  ARG  RLYSRTG+DIG AFPD+  G + + V DGEL+V+R GEVAPF DLQ+RLNRKA + + +   PAHVRLYDAL I  +DLR LPF +RR RLEAWHAA+ PP +DLSPLV+   KDELQR+WAATRA GIEG+MLKRR SPY+AGRP+G W+KWKRA LT DCVLMYAQRGSG+RSS +SD+TFGAW    DG  ELVPVGKAYFGFTD EL E+DRWVR+HT E FGPVR V P LV EVAFDAVQRS RH+SG+AMRFPR+HRIRWDKPA+EADRLETLE M+E
Sbjct:  227 HALSPPYEPLFAWLEGRGPRPDIADVPVFRPLMLSHPLEEADWEELSIGDYLAEWKWDGIRVQLVGARGTVRLYSRTGDDIGAAFPDVVGGLSFDAVLDGELVVLRGGEVAPFNDLQQRLNRKAVTRRQMEQFPAHVRLYDALAIAGEDLRPLPFVERRARLEAWHAAARPPRTDLSPLVEIASKDELQRLWAATRAIGIEGIMLKRRDSPYVAGRPKGLWWKWKRAPLTLDCVLMYAQRGSGKRSSYYSDYTFGAWREGEDGARELVPVGKAYFGFTDEELVEIDRWVRSHTTESFGPVRAVEPGLVFEVAFDAVQRSSRHRSGVAMRFPRIHRIRWDKPAAEADRLETLEAMIE 582          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A2W4RUH9_9PROT (DNA ligase (ATP) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RUH9_9PROT)

HSP 1 Score: 517 bits (1331), Expect = 1.820e-179
Identity = 241/356 (67.70%), Postives = 292/356 (82.02%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVE 1068
            H LTPPY PLF WL G   +PD++GAPVFRP+ML+H ++E +L+ LD+ +F+ EWKWDGIRVQIA+ RG  RLYSRTG++IG +FP++ + +  + V DGELLVVR+G VAPF DLQ+RLNRK  +  LL   PAHVRLYDAL++  +DLRQLPF +RR RLE WHA   PP +DLS LV+  D+DEL RIW  TR  GIEGLMLKR+ASPYLAGRPRGHW+KWKRA LT DCVLMYAQRGSGRRSS +SD+TFGAW    DG++ELVPVGKAY G+TDAEL  LDRW+RN+T++R+GPVR V P LVLE+AFDAVQRS RH+SGIAMRFPR+HRIRWDKPA+EA++LETL  ++E
Sbjct:  171 HALTPPYEPLFAWLEGRAEKPDITGAPVFRPLMLAHPIEEKELEELDVREFSAEWKWDGIRVQIAAGRGEVRLYSRTGDEIGSSFPELISAFQFDAVVDGELLVVRDGRVAPFNDLQQRLNRKTVTRALLERYPAHVRLYDALILNGEDLRQLPFIERRRRLEQWHAEVRPPRTDLSELVEIADRDELYRIWRDTRGAGIEGLMLKRQASPYLAGRPRGHWYKWKRAPLTVDCVLMYAQRGSGRRSSYYSDYTFGAWAKKPDGSVELVPVGKAYSGYTDAELITLDRWIRNNTVDRYGPVRAVRPALVLEIAFDAVQRSTRHRSGIAMRFPRIHRIRWDKPAAEAEQLETLLGLIE 526          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A7C4XT49_9HYPH (DNA ligase (ATP) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XT49_9HYPH)

HSP 1 Score: 514 bits (1323), Expect = 6.040e-178
Identity = 240/356 (67.42%), Postives = 287/356 (80.62%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVE 1068
            HGL+PPY PLF WL GT P+PDV+G+PVF P+MLS  LD+ +L  LD+ +F +EWKWDGIRVQ+ S   ATRLYSRTG+DI  +FP+I  GW  +GVFDGELL+VR GEVAPFADLQ+RLNRK  S +++ + PAH+RLYDAL IG  DLR L   +RR RLEAW  +  PP +DLSPLV+  DKDEL R+W+ TR  G+EGLMLKR  SPYLAGRP+GHW+KWKRA+LT DCVLMYAQRGSG+RSSL+SD+TFG W    + T ELV VGKAY G+TD EL ELDRW+R HTLERFGP RRV P LVLE+AFDAVQRS RHKSG+A+RFPR+HRIRW+KPA EADRL+T+  ++E
Sbjct:  172 HGLSPPYEPLFAWLTGTAPRPDVTGSPVFLPLMLSQPLDDEELARLDVGEFCIEWKWDGIRVQVVSTGPATRLYSRTGDDISRSFPEIVEGWCGQGVFDGELLIVREGEVAPFADLQRRLNRKTVSRRMMEEYPAHIRLYDALRIGDADLRSLALRERRARLEAWWVSRAPPRTDLSPLVEVSDKDELIRLWSGTRGVGVEGLMLKRSQSPYLAGRPKGHWYKWKRASLTLDCVLMYAQRGSGKRSSLYSDYTFGVWTGTTEHT-ELVAVGKAYSGYTDRELLELDRWIRQHTLERFGPARRVEPALVLEIAFDAVQRSSRHKSGVALRFPRIHRIRWEKPAREADRLDTVIALLE 526          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A6N6SSP9_9HYPH (DNA ligase (ATP) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SSP9_9HYPH)

HSP 1 Score: 501 bits (1289), Expect = 5.790e-173
Identity = 242/357 (67.79%), Postives = 279/357 (78.15%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVEG 1071
            HGL PPY PLF WLAG   +PDVS APVFRP+MLSH L+++D  ALD+ DFA EWKWDGIRVQI +      LYSRTG+DI  +FPD+  G+  + V DGELLV+R G VAPF DLQ+RLNRK  S + L+  PAHVRLYDALMI  +DLRQ PF +RR RLEAWHA   P  +DLSPL+    KDEL+ +W+ATR TGIEG+MLKRR S Y+AGRP+G W+KWKRA LT DCVLMYAQRGSG+RSS +SD+TFGAW     G  ELVPVGKAYFGFTD EL ++DRWVR +T E FGPVR V P+LV EVAFDAVQRS RHKSG+AMRFPR+HRIRWDKPA EADRLETL  M+ G
Sbjct:  180 HGLAPPYEPLFAWLAGHASRPDVSDAPVFRPLMLSHPLEDADWAALDVADFAAEWKWDGIRVQIVARPSQVHLYSRTGDDISASFPDVVGGFQFDAVLDGELLVLREGHVAPFNDLQQRLNRKGVSRRQLQQFPAHVRLYDALMIAGEDLRQSPFGERRARLEAWHAQVRPLRTDLSPLIGFSSKDELRGLWSATRETGIEGIMLKRRDSSYVAGRPKGLWYKWKRAPLTLDCVLMYAQRGSGKRSSYYSDYTFGAWRTAEGGAPELVPVGKAYFGFTDEELLQIDRWVRANTTESFGPVRAVAPKLVFEVAFDAVQRSTRHKSGVAMRFPRIHRIRWDKPAEEADRLETLIAMIGG 536          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A1E2RY45_9HYPH (DNA ligase (ATP) n=1 Tax=Methyloligella halotolerans TaxID=1177755 RepID=A0A1E2RY45_9HYPH)

HSP 1 Score: 484 bits (1245), Expect = 2.150e-166
Identity = 230/357 (64.43%), Postives = 278/357 (77.87%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVEG 1071
            HGL PPY  LF WLAG  P+P+V   P+FRP+MLSHA+++ +LDA+  + F  EWKWDGIRVQ+++  G  RL+SRTG+DI GAFPD+  G     V DGELLV+R GEV PF DLQ+RLNRK  +  +L+  PAH+RLYD L    +D+R L  E+RR RLEAW+A   P  +DLS  ++  D  EL+++W   R TGIEGLMLKRRASPYL+GRP+GHW+KWKRA LT D V+MYAQRGSG+RSS +SD+TFGAW    DG  ELVPVGK+YFGFTDAEL ELDRWVRNHT++RFGPVR+V P+LV EVAFD+V  S RHKSG+AMRFPRVHRIRWDKPA EADRLETL +M+EG
Sbjct:  173 HGLAPPYPQLFGWLAGEAPKPNVEEMPIFRPLMLSHAIEDDELDAIAADAFQAEWKWDGIRVQLSTMAGEHRLFSRTGDDISGAFPDVFEGLPENCVLDGELLVMREGEVQPFNDLQQRLNRKTVTANMLKTYPAHIRLYDILYDDGEDVRALSLEERRTRLEAWYARHGPARADLSETLEFDDIAELKQLWENARETGIEGLMLKRRASPYLSGRPKGHWYKWKRAPLTLDAVVMYAQRGSGKRSSYYSDYTFGAWRPSDDGGEELVPVGKSYFGFTDAELQELDRWVRNHTVDRFGPVRQVEPKLVFEVAFDSVHPSTRHKSGVAMRFPRVHRIRWDKPADEADRLETLVKMIEG 529          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A2W2BT08_9HYPH (DNA ligase (ATP) n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BT08_9HYPH)

HSP 1 Score: 480 bits (1236), Expect = 4.980e-165
Identity = 231/355 (65.07%), Postives = 281/355 (79.15%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMV 1065
            HG++PPY  LFDWL     +P +S  P+FRP+ML+HAL+E+D  A+ L+DFA EWKWDGIR+Q+A+  GATRL+SRTG+DIG AFP++   +  + V DGELLVVRNGEVAPF DLQ+RLNRK  +  ++   PAHVR YDAL IG +DLR L F  RR RLEAWH    P  SDLS ++    K+EL+  W ATR  GIEGLMLKR++SPYLAGRP+GHW+KWKRAALTADCVL+YAQ+GSG+RSS +SD+TFGAW    +G   LVPVGKAY GFTD ELA LDR+VR +T++RFGPVR VTP+LVLE+AFDA+Q+S RHKSGIAMRFPRV RIRWDKPA EAD LETL+ ++
Sbjct:  171 HGISPPYTELFDWLEQRAERPSLSATPIFRPLMLAHALEEADWQAMALDDFAAEWKWDGIRIQVAAKGGATRLFSRTGDDIGQAFPELVDHFKFDAVLDGELLVVRNGEVAPFGDLQQRLNRKTVTRAMVTKYPAHVRFYDALEIGGEDLRGLAFTARRERLEAWHRQYGPAYSDLSEVLSFASKEELKTRWEATREEGIEGLMLKRKSSPYLAGRPKGHWYKWKRAALTADCVLLYAQKGSGKRSSFYSDYTFGAWT-EKEGKPFLVPVGKAYSGFTDEELAALDRFVRQNTIDRFGPVRSVTPKLVLEIAFDAIQQSSRHKSGIAMRFPRVSRIRWDKPAEEADTLETLKGLM 524          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: UPI0009301D53 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009301D53)

HSP 1 Score: 481 bits (1238), Expect = 5.140e-165
Identity = 232/369 (62.87%), Postives = 275/369 (74.53%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVF-DGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLE-----------LVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVEG 1071
            H LTPPY  LF WL G GP+PD +G PVFRP+ML+HA++E D    D  DFA EWKWDGIRVQIA+     R++SRTG+DI   FPD+ A ++   V  DGELLV R G VAPF DLQ+RLNRK  +G++LR++PAHVRLYD L+ G +DLR L F +RR+RLE WHAA  PPL+D+SPLV    +DEL  +W   R  GIEGLMLKR +SPYL+GRPRGHWFKWKRAALT DCVLMYAQRGSG+RSS +SD+TFG W      TLE           LVPVGKAY G TDAEL E+DR+VR HT+++FGPVR V P LVLE+AFDA+  S RHKSG+AMRFPR+HRIRWDKP  EADRLE   R++ G
Sbjct:  171 HALTPPYLDLFQWLDGKGPRPDAAGKPVFRPLMLAHAIEEQDWTGFDPADFAAEWKWDGIRVQIAAHGAHVRIFSRTGDDISRTFPDVVAAFDGRDVLLDGELLVARRGVVAPFNDLQQRLNRKVVTGRMLREHPAHVRLYDILIAGGEDLRDLTFRERRVRLETWHAAHTPPLTDVSPLVPFATRDELDALWTGARQEGIEGLMLKRWSSPYLSGRPRGHWFKWKRAALTLDCVLMYAQRGSGKRSSFYSDYTFGVWREIEQPTLEGPRGDIFPGHELVPVGKAYSGMTDAELLEIDRFVRTHTVDQFGPVRAVEPRLVLEIAFDAIFSSTRHKSGLAMRFPRIHRIRWDKPPQEADRLEAARRLISG 539          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: A0A3D3B0E0_9HYPH (DNA ligase (ATP) n=3 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3D3B0E0_9HYPH)

HSP 1 Score: 475 bits (1223), Expect = 4.350e-163
Identity = 224/355 (63.10%), Postives = 272/355 (76.62%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMV 1065
            HGL PPY  LF WL+G   +P+    PVFRP+MLSH +++ +L  +D +DF  EWKWDGIRVQ A   G  RL+SRTG+D+ G+FPD+        V DGELLV+R GEVAPF DLQ+RLNRK+ +  +L+ +PAH+RLYD L  GA+DLR LPF  RR RLEAWHAA+ P  +D+S  +D     EL+ +WA  R TGIEGLMLKRR SPYLAGRP+GHW+KWKRA L  D VLMYAQRGSG+RSS +SD+TFGAW    +G  ELVPVGK+YFGFTD EL ELD +VRNHT++ FGPVR+V P+LV EVAFD+V  S RHKSG+AMRFPR+HRIRWDKPA+EADRL+TL RM+
Sbjct:  171 HGLRPPYVELFSWLSGESQRPETGAGPVFRPLMLSHQIEDRELQCIDPKDFVAEWKWDGIRVQAAHQGGEKRLFSRTGDDVSGSFPDVVEALPEGVVLDGELLVMREGEVAPFNDLQQRLNRKSVTAAMLKSHPAHIRLYDMLFEGAEDLRPLPFSARRKRLEAWHAATAPARTDISATIDFASVGELESLWAGARETGIEGLMLKRRDSPYLAGRPKGHWYKWKRAPLILDAVLMYAQRGSGKRSSYYSDYTFGAWRDGENGAPELVPVGKSYFGFTDEELKELDAFVRNHTVDSFGPVRQVEPKLVFEVAFDSVHHSTRHKSGVAMRFPRIHRIRWDKPAAEADRLDTLLRMI 525          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: UPI00198B8188 (Cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI00198B8188)

HSP 1 Score: 472 bits (1215), Expect = 7.100e-162
Identity = 226/355 (63.66%), Postives = 270/355 (76.06%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMV 1065
            HGL PPY  LF WL+  GP+P+V G   FRP+MLSH +D+ +L +++ +DF  EWKWDGIRVQ     G  RL+SRTG+DI GAFPD+        V DGELLV+R+GEVAPF  LQ+RLNRK  SG LL+ +PAH+RLYD L+ G +DLR LP   RR RLEAWH  + P  +DLS L+D     EL+ +WA  R TGIEGLMLKRR SPY+AGRP+GHW+KWKRA L  D VLMYAQRGSG+RSS +SD+TFGAW     G  ELVPVGK+YFGFTD EL ELDRWVRNHT++ FGPVR+V P LV EVAFD+V RS RHKSG+AMRFPR++RIRWDKPA+EADR+ETL  M+
Sbjct:  171 HGLRPPYGELFAWLSAKGPRPEVEGRATFRPLMLSHQIDDKELPSIEPKDFIAEWKWDGIRVQAVHQGGERRLFSRTGDDISGAFPDVVESLPEGVVLDGELLVMRDGEVAPFNALQQRLNRKTVSGALLKSHPAHIRLYDILLEGGEDLRALPLVARRARLEAWHKRNAPRRTDLSGLIDFTSVKELEILWADARETGIEGLMLKRRDSPYIAGRPKGHWYKWKRAPLVIDAVLMYAQRGSGKRSSYYSDYTFGAWRDGDAGEEELVPVGKSYFGFTDEELKELDRWVRNHTVDSFGPVRQVEPNLVFEVAFDSVHRSTRHKSGVAMRFPRINRIRWDKPAAEADRVETLAAMI 525          
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Match: UPI0003813878 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003813878)

HSP 1 Score: 473 bits (1217), Expect = 7.550e-162
Identity = 230/369 (62.33%), Postives = 276/369 (74.80%), Query Frame = 1
Query:    1 HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLEDFALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVF-DGELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDLRQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGIEGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHSDFTFGAWVMHLDGTLE------------LVPVGKAYFGFTDAELAELDRWVRNHTLERFGPVRRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLETLERMVE 1068
            H + PPY  LF WL G GP+PD  G PVFRP+ML+HA++E D    +  +FA EWKWDGIRVQIA+  G  R++SRTG+DI  +FP+I + +    V  DGELLV R G VAPF DLQ+RLNRKA +G++L+D+PAHVRLYD L+ G++DLR L F +RR+RLE W+    PPLSD+SPLV    ++EL  +WA  R TGIEGLMLKR  SPYL+GRPRGHWFKWKRAALT DCVLMYAQRGSG+RSS +SD+TFG W    +   E            LVPVGKAY GFTDAEL E+DR+VRNHT E+FGPVR V P LVLEVAFDA+ RSPRHKSG+AMRFPR+HRIRWDKPA EAD +E    ++E
Sbjct:  171 HAIAPPYTDLFRWLEGEGPRPDAGGKPVFRPLMLAHAIEEQDWTTFEPGEFAAEWKWDGIRVQIAAHGGHARIFSRTGDDISRSFPEIVSAFEGLDVLLDGELLVARRGIVAPFNDLQQRLNRKAVTGRMLKDHPAHVRLYDLLIDGSEDLRSLSFRERRVRLEGWYERKRPPLSDISPLVPFATREELDTLWADARDTGIEGLMLKRWTSPYLSGRPRGHWFKWKRAALTLDCVLMYAQRGSGKRSSYYSDYTFGVWRSIEEPQSETSPRGDVYPGHELVPVGKAYSGFTDAELTEIDRFVRNHTTEQFGPVRAVEPRLVLEVAFDAIFRSPRHKSGLAMRFPRIHRIRWDKPAREADTIEAARNLME 539          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21284.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2QQ32_9HYPH2.380e-18369.94DNA ligase (ATP) n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A2W4RUH9_9PROT1.820e-17967.70DNA ligase (ATP) n=1 Tax=Proteobacteria bacterium ... [more]
A0A7C4XT49_9HYPH6.040e-17867.42DNA ligase (ATP) n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A6N6SSP9_9HYPH5.790e-17367.79DNA ligase (ATP) n=1 Tax=Hyphomicrobiaceae bacteri... [more]
A0A1E2RY45_9HYPH2.150e-16664.43DNA ligase (ATP) n=1 Tax=Methyloligella halotolera... [more]
A0A2W2BT08_9HYPH4.980e-16565.07DNA ligase (ATP) n=1 Tax=Aestuariivirga litoralis ... [more]
UPI0009301D535.140e-16562.87cisplatin damage response ATP-dependent DNA ligase... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21284contigP-wetherbeei_contig21284:103..1176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1267005.KB911263_gene1357
Preferred namelig
PFAMsDNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N
Model size1074
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00005
KEGG koko:K10747
KEGG ReactionR00381,R00382,R10822,R10823
KEGG Pathwayko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-162
EggNOG OGsCOG1793@1|root,COG1793@2|Bacteria,1MV3S@1224|Proteobacteria,2TRQ9@28211|Alphaproteobacteria,3N63T@45401|Hyphomicrobiaceae
EC6.5.1.1,6.5.1.6,6.5.1.7
DescriptionDNA ligase
Cds size1074
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186220.8248832-CDS-P-wetherbeei_contig21284:102..11761683186220.8248832-CDS-P-wetherbeei_contig21284:102..1176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21284 103..1176 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21284.1.1prot_P-wetherbeei_contig21284.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21284 103..1176 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21284.1.1

>prot_P-wetherbeei_contig21284.1.1 ID=prot_P-wetherbeei_contig21284.1.1|Name=mRNA_P-wetherbeei_contig21284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp
HGLTPPYRPLFDWLAGTGPQPDVSGAPVFRPMMLSHALDESDLDALDLED
FALEWKWDGIRVQIASARGATRLYSRTGEDIGGAFPDIAAGWNAEGVFDG
ELLVVRNGEVAPFADLQKRLNRKAASGKLLRDNPAHVRLYDALMIGADDL
RQLPFEDRRLRLEAWHAASPPPLSDLSPLVDARDKDELQRIWAATRATGI
EGLMLKRRASPYLAGRPRGHWFKWKRAALTADCVLMYAQRGSGRRSSLHS
DFTFGAWVMHLDGTLELVPVGKAYFGFTDAELAELDRWVRNHTLERFGPV
RRVTPELVLEVAFDAVQRSPRHKSGIAMRFPRVHRIRWDKPASEADRLET
LERMVEG*
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mRNA from alignment at P-wetherbeei_contig21284:103..1176-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21284.1.1 ID=mRNA_P-wetherbeei_contig21284.1.1|Name=mRNA_P-wetherbeei_contig21284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig21284:103..1176- (Phaeothamnion wetherbeei SAG_119_79)
CATGGTCTGACGCCGCCGTACCGGCCCCTCTTCGATTGGCTGGCGGGCAC GGGGCCGCAACCCGATGTCAGCGGGGCTCCGGTTTTCCGGCCGATGATGC TGTCGCACGCGCTCGATGAATCCGACCTCGATGCGCTGGACCTCGAGGAC TTCGCGCTCGAATGGAAATGGGACGGCATTCGCGTGCAGATCGCCTCCGC GCGCGGGGCGACGCGGCTTTATTCGCGCACGGGCGAGGATATCGGCGGCG CGTTTCCCGATATCGCGGCGGGGTGGAACGCGGAAGGCGTGTTCGACGGC GAACTTCTGGTGGTGCGCAACGGCGAGGTCGCGCCCTTTGCCGATCTGCA GAAGCGGCTCAACCGCAAGGCCGCGTCGGGGAAGCTGTTGCGGGACAATC CCGCGCATGTCCGGCTCTACGATGCGCTGATGATCGGTGCCGACGATCTG CGTCAATTGCCGTTCGAGGATCGCCGGTTGCGGCTGGAGGCGTGGCATGC AGCGAGCCCGCCGCCGCTCTCGGATCTGTCGCCGCTCGTAGATGCCCGCG ACAAGGATGAACTGCAGCGGATCTGGGCGGCGACGCGCGCGACCGGCATC GAAGGCCTGATGCTGAAGCGGCGCGCGAGCCCTTATCTCGCAGGTCGGCC GCGCGGCCATTGGTTCAAGTGGAAGCGGGCGGCGCTGACGGCGGACTGCG TTCTGATGTATGCGCAGCGCGGCTCGGGCAGGCGGTCGTCGCTGCATTCG GATTTCACGTTCGGGGCGTGGGTGATGCACTTGGACGGCACGCTCGAACT GGTGCCGGTCGGCAAAGCCTATTTCGGTTTCACCGACGCGGAACTCGCCG AACTCGACCGCTGGGTGCGCAATCATACGCTGGAGCGGTTCGGGCCGGTG CGGCGCGTCACGCCCGAACTCGTGCTCGAGGTCGCATTCGACGCGGTGCA GCGTTCGCCGCGCCACAAGTCGGGCATCGCGATGCGCTTTCCCCGCGTGC ATCGAATCCGCTGGGACAAACCCGCGAGCGAAGCCGACCGGTTGGAAACG CTGGAGCGGATGGTGGAAGGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21284:103..1176-

>mRNA_P-wetherbeei_contig21284.1.1 ID=mRNA_P-wetherbeei_contig21284.1.1|Name=mRNA_P-wetherbeei_contig21284.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig21284:103..1176- (Phaeothamnion wetherbeei SAG_119_79)
CATGGTCTGACGCCGCCGTACCGGCCCCTCTTCGATTGGCTGGCGGGCAC
GGGGCCGCAACCCGATGTCAGCGGGGCTCCGGTTTTCCGGCCGATGATGC
TGTCGCACGCGCTCGATGAATCCGACCTCGATGCGCTGGACCTCGAGGAC
TTCGCGCTCGAATGGAAATGGGACGGCATTCGCGTGCAGATCGCCTCCGC
GCGCGGGGCGACGCGGCTTTATTCGCGCACGGGCGAGGATATCGGCGGCG
CGTTTCCCGATATCGCGGCGGGGTGGAACGCGGAAGGCGTGTTCGACGGC
GAACTTCTGGTGGTGCGCAACGGCGAGGTCGCGCCCTTTGCCGATCTGCA
GAAGCGGCTCAACCGCAAGGCCGCGTCGGGGAAGCTGTTGCGGGACAATC
CCGCGCATGTCCGGCTCTACGATGCGCTGATGATCGGTGCCGACGATCTG
CGTCAATTGCCGTTCGAGGATCGCCGGTTGCGGCTGGAGGCGTGGCATGC
AGCGAGCCCGCCGCCGCTCTCGGATCTGTCGCCGCTCGTAGATGCCCGCG
ACAAGGATGAACTGCAGCGGATCTGGGCGGCGACGCGCGCGACCGGCATC
GAAGGCCTGATGCTGAAGCGGCGCGCGAGCCCTTATCTCGCAGGTCGGCC
GCGCGGCCATTGGTTCAAGTGGAAGCGGGCGGCGCTGACGGCGGACTGCG
TTCTGATGTATGCGCAGCGCGGCTCGGGCAGGCGGTCGTCGCTGCATTCG
GATTTCACGTTCGGGGCGTGGGTGATGCACTTGGACGGCACGCTCGAACT
GGTGCCGGTCGGCAAAGCCTATTTCGGTTTCACCGACGCGGAACTCGCCG
AACTCGACCGCTGGGTGCGCAATCATACGCTGGAGCGGTTCGGGCCGGTG
CGGCGCGTCACGCCCGAACTCGTGCTCGAGGTCGCATTCGACGCGGTGCA
GCGTTCGCCGCGCCACAAGTCGGGCATCGCGATGCGCTTTCCCCGCGTGC
ATCGAATCCGCTGGGACAAACCCGCGAGCGAAGCCGACCGGTTGGAAACG
CTGGAGCGGATGGTGGAAGGGTGA
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