mRNA_P-wetherbeei_contig2119.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A835YQ77_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ77_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.550e-36 Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 16 KFVAVDPLG--RDDEEISMQEAVADEVNKRMGKAVEELREKYDGSKPGAAGGYAPASDVEPSGAAYRQARAEAARRSKAXXXXXXXXXXXXQAEDEELRGQLQARQ--DQEDSDDELLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
KF VDPLG DD+E ++Q+AV +EVN RMGKAV++L+ KY S G Y + D P+G AY++ + E A+R+ A AE++EL+ QLQA + D+ D DDE L+GLD+DPE+ R+RE RL +++A HD R+ L+KGHG+YR+VTQD+FL EV
Sbjct: 15 KFSLVDPLGGAADDDEKTLQQAVTEEVNNRMGKAVDDLKGKYGSSGKG----YEASHDNNPTGLAYQREKEENAKRAAAIKSQEDALKAEQDAEEQELQQQLQAHRLLDESDDDDEYLEGLDDDPELERIREARLAQLKAAHDARSSNLAKGHGRYREVTQDEFLPEV 178
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: D7G1T8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T8_ECTSI) HSP 1 Score: 126 bits (317), Expect = 2.770e-32 Identity = 84/179 (46.93%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 28 VDPLGRDDEEISMQEAVADEVNKRMGKAVEELREKYD-GSKPGAAGGYAPASDVEPSGAAYRQARAEAARRSKAXXXXXXXXXXXXQAEDEELRGQLQARQDQEDSD------------------DELLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
VDPLG D+EE SMQE VA+EVN RMG+AV EL++KY+ G K GY ASD +P+GAAY QAR + +R KA + ED EL Q++A DELL GLD DPEI R+RE RLRE++ H+ RA+ ++KGHGQYR++ QD+FL EV
Sbjct: 2 VDPLGADEEEKSMQEMVANEVNDRMGRAVGELKDKYEKGGK-----GYDAASDAQPTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASXXXXXXXXXXXXXXXXXXXXXXXXXDELLAGLDADPEICRIRESRLRELKRVHEARAENIAKGHGQYREIVQDEFLPEV 175
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A8J2SU13_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU13_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.160e-20 Identity = 72/177 (40.68%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 4 SKFDKFVAVDPLG--RDDEEISMQEAVADEVNKRMGKAVEELREKYDGSKPGAAGGYAPASDVEPSGAAYRQARAEAARRSKAXXXXXXXXXXXXQAEDEELRGQLQARQDQ----EDSDDELLDGLDEDPEI-RRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEVRK 513
SK D F V+PLG DE+ S+QEA+ +EV+KRM AVE+LREKY G S+ PSGAAYRQ + +A +KA +AE + Q +++ DDE LDGL++D +I + LR RL +M+A+H + + L KGHG+Y ++ QDDFL++V K
Sbjct: 11 SKADIFTPVNPLGGAATDEDKSIQEAMTEEVDKRMRNAVEDLREKY-----ATGGSNVETSEHGPSGAAYRQ-KQQAIDNAKAKKRAERYLKEQERAEQVRRQAAEQIIEEEGVGESSDDDEYLDGLEDDGDILQNLRNKRLAQMKAQHQEKIENLQKGHGRYHEICQDDFLNDVLK 181
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A4D9DBW2_9STRA (Thioredoxin domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBW2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.110e-18 Identity = 72/173 (41.62%), Postives = 97/173 (56.07%), Query Frame = 1
Query: 16 KFVAVDPLGRDDEEISMQEAVADEVNKRMGKAVEELREKYDGSKPGA-AGGYAPASDVE---PSGAAYRQARAEAARRSKAXXXXXXXXXXXXQAED----EELRGQLQ-ARQDQEDSDDELLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
KF VDP DD + + +A VN RMGKAVEELR+K D +G P D P+G+AYRQ EA +R++ QA D EE+ +LQ + ++ DDE D LD PE + +RE RL ++A+H +AD +SKGHGQYR++TQD+FL EV
Sbjct: 4 KFTMVDPAQGDD----VYQHMAQTVNDRMGKAVEELRQKNDERTAALQSGASVPDEDASVDGPTGSAYRQV--EARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLD--PEFKLIRERRLAALKAQHQEKADNMSKGHGQYREITQDEFLPEV 168
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A7S2RBF7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBF7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.350e-11 Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 55 EISMQEAVADEVNKRMGKAVEELREKYDGSKPGAAGGYAPASDVEPSGAAYRQARAEAARRSKAXXXXXXXXXXXXQAEDEELRGQLQAR-------QDQED--------SDDELLDGLD--EDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
E S+Q+AV +EV RM KA EEL++KY GA AS P+GAAY A A+ R +A D + +++A D+ED SD LLD L+ EDPE+ +R LR++++++EH + + + KGHG ++ QD+FL +
Sbjct: 24 EKSVQQAVQEEVENRMTKAAEELKQKYARGHGGA-----DASVDRPTGAAYTAAAAQERDRRRALRDQEQAAAYAADQADAQREAEVRAHFFAQSGNSDEEDEGGDEEVDSDXXLLDELESSEDPELLAIRNLRMQQLKSEHTAKMENIRKGHGSLTEIVQDEFLPRI 186
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: H3H3S9_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3S9_PHYRM) HSP 1 Score: 69.7 bits (169), Expect = 4.060e-11 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 283 QAEDEELRGQLQARQDQEDSDDE-LLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
Q ED GQ Q D DSDDE LLD LDEDPE+ R+R RLR+++ E + + ++KGHG+YR++TQD+FL EV
Sbjct: 73 QKEDRSFVGQEQ--DDDMDSDDEALLDELDEDPELERIRAARLRQLKIEFEEKQTLMAKGHGEYREITQDEFLKEV 146
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A833SN23_PHYIN (Thioredoxin n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SN23_PHYIN) HSP 1 Score: 68.6 bits (166), Expect = 1.070e-10 Identity = 38/77 (49.35%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 283 QAEDEELRGQLQARQDQE-DSDDE-LLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
Q D +RGQ +QD++ DSDDE +LD LDEDPE+ R+R RL++++ E++ + ++KGHG+YR++TQD+FL EV
Sbjct: 74 QENDSYIRGQ---QQDEDLDSDDEAMLDELDEDPELERIRAARLKQLKYEYEEKQTLMAKGHGEYREITQDEFLKEV 147
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A6G0X4T8_9STRA (Thioredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4T8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.580e-10 Identity = 29/59 (49.15%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 331 QEDSDDELLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
++D DDE LD LD+DP+ RLRE+RL++++ ++ + + L+KGHG+YR++ QD+FL EV
Sbjct: 89 EDDDDDEFLDELDQDPDFMRLREMRLKQLQDQYKIKQENLAKGHGEYREIVQDEFLKEV 147
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A2P4XK96_9STRA (Thioredoxin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XK96_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.010e-10 Identity = 34/75 (45.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 286 AEDEELRGQLQARQDQEDSDDE-LLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
AE + R ++ ++++ DSDDE +LD LDEDPE+ R+R RL++++ E + + ++KGHG+YR++TQD+FL EV
Sbjct: 71 AEQKTDRSYVRKQEEEVDSDDEAMLDELDEDPELERIRAARLKQLKQEFEEKQTLMAKGHGEYREITQDEFLKEV 145
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Match: A0A6A3IHM9_9STRA (Thioredoxin domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IHM9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 5.380e-10 Identity = 33/75 (44.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 283 QAEDEELRGQLQARQDQEDSDDELLDGLDEDPEIRRLRELRLREMRAEHDTRADRLSKGHGQYRDVTQDDFLSEV 507
Q ED GQ Q ++ + D+ +LD LDEDPE+ R+R RL++++ E + + L+KGHG++R++TQD+FL EV
Sbjct: 73 QKEDRSYVGQQQEDEELDSDDEAMLDELDEDPELERIRAARLKQLKNEFEEKQMLLAKGHGEFREITQDEFLKEV 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2119.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2119.1.1 >prot_P-wetherbeei_contig2119.1.1 ID=prot_P-wetherbeei_contig2119.1.1|Name=mRNA_P-wetherbeei_contig2119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp MSKFDKFVAVDPLGRDDEEISMQEAVADEVNKRMGKAVEELREKYDGSKPback to top mRNA from alignment at P-wetherbeei_contig2119:186..1040- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2119.1.1 ID=mRNA_P-wetherbeei_contig2119.1.1|Name=mRNA_P-wetherbeei_contig2119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:186..1040- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2119:186..1040- >mRNA_P-wetherbeei_contig2119.1.1 ID=mRNA_P-wetherbeei_contig2119.1.1|Name=mRNA_P-wetherbeei_contig2119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:186..1040- (Phaeothamnion wetherbeei SAG_119_79)back to top |