mRNA_P-wetherbeei_contig21156.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A7X9KGI0_9ACTN (Response regulator transcription factor n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KGI0_9ACTN) HSP 1 Score: 361 bits (927), Expect = 6.230e-125 Identity = 181/220 (82.27%), Postives = 194/220 (88.18%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
T+VVVEDD NIADL+DLYLR+AGFRVLQ GERGL+LI QH P LV+LD+GLP IDGFEVCRRVRA S VPVLFLTARD ELDR+LGLELGADDYVTKPFSPRE+VARVKAILRRGQP I +GDD VD RREAR RG+AVALATREFDLLAHL+RNQG+ALSRQQLLD+VWGADW GDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG
Sbjct: 7 TLVVVEDDANIADLLDLYLRDAGFRVLQAAHGERGLQLIEQHRPALVLLDIGLPDIDGFEVCRRVRARSNVPVLFLTARDGELDRLLGLELGADDYVTKPFSPREIVARVKAILRRGQPDDRDAHDITHLGDDYEVDVTRREARYRGQAVALATREFDLLAHLSRNQGIALSRQQLLDSVWGADWVGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 226
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A3C2B4S0_9ACTN (DNA-binding response regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4S0_9ACTN) HSP 1 Score: 362 bits (930), Expect = 1.450e-124 Identity = 178/220 (80.91%), Postives = 194/220 (88.18%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
TVV++EDDP+IADL+DLYLR GFR LQ SG RGLEL+ QH P LVVLD+GLP IDGFEVCRR+RA S+VPVLFLTARD E+DRVLGLELGADDYV KPFSPRELVARVKAILRRGQP T +S+G+ + VD ARREARVRG A+ LAT+EFDLLAH ARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWG+GYRLG
Sbjct: 61 TVVIIEDDPSIADLLDLYLREGGFRPLQAASGMRGLELVEQHQPALVVLDIGLPDIDGFEVCRRIRARSSVPVLFLTARDGEIDRVLGLELGADDYVVKPFSPRELVARVKAILRRGQPPAPAAATTLSVGEMVDVDVARREARVRGVAIPLATKEFDLLAHFARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGVGYRLG 280
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A6I3WVV8_9ACTN (Response regulator n=2 Tax=root TaxID=1 RepID=A0A6I3WVV8_9ACTN) HSP 1 Score: 358 bits (920), Expect = 7.010e-124 Identity = 171/220 (77.73%), Postives = 192/220 (87.27%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
T++V+EDDPNIADL+D YLR AGFR LQ +GERGLELI QH+P L +LD+GLP IDGF+VCRR+RA A+PVLFLTARD E+DRVLGLELGADDYVTKPFSPRE+VARVKAILRRGQP +++ IGDD +D ARRE R +G+ VALATREFDLLAHLA NQG+ALSRQQLLD VWGADWYGDDRTVDVHVRQLRKKLGD+L LATVWGIGYRLG
Sbjct: 6 TIIVIEDDPNIADLLDTYLRGAGFRALQAATGERGLELIEQHAPALAILDIGLPDIDGFDVCRRIRAKGALPVLFLTARDGEIDRVLGLELGADDYVTKPFSPREIVARVKAILRRGQPPAPVGASVIHIGDDFAIDLARREVRAKGQPVALATREFDLLAHLAANQGIALSRQQLLDGVWGADWYGDDRTVDVHVRQLRKKLGDELALATVWGIGYRLG 225
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A7K1B426_9ACTN (Response regulator n=2 Tax=root TaxID=1 RepID=A0A7K1B426_9ACTN) HSP 1 Score: 358 bits (919), Expect = 1.420e-123 Identity = 180/224 (80.36%), Postives = 197/224 (87.95%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVR---ATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVP-ATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
TVVVVEDDP+IADLVDLYLR AGFRVLQ P GERGLEL+ QH PVLVVLDVGLP +DGFEVCRR+R ATS +PVLFLTARD E+DRVLGLELGADDYVTKPFSPRELVARVKAILRRG A ++T+ IGD IVVD ARRE R ++V LAT+EFDLLAH ARNQG+ALSRQQL++AVWGADWYGDDRTVDVHVRQLRKK+GDDLPLATVWG+GYRLG
Sbjct: 12 TVVVVEDDPSIADLVDLYLREAGFRVLQAPGGERGLELVAQHRPVLVVLDVGLPDLDGFEVCRRLRSAPATSTLPVLFLTARDGEIDRVLGLELGADDYVTKPFSPRELVARVKAILRRGAAAAQAAEQTVFEIGDGIVVDVARREVRSGADSVPLATKEFDLLAHFARNQGIALSRQQLIEAVWGADWYGDDRTVDVHVRQLRKKVGDDLPLATVWGVGYRLG 235
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A6I3EY91_9ACTN (Response regulator n=2 Tax=root TaxID=1 RepID=A0A6I3EY91_9ACTN) HSP 1 Score: 355 bits (912), Expect = 1.200e-122 Identity = 174/220 (79.09%), Postives = 192/220 (87.27%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
TVVV+EDDPNIADL+D+YLR+AGFRVLQ G RGL+L+ Q P LVVLD+GLP IDGFEVCRR+RA S+VPVLFLTARD E+DRVLGLELGADDYVTKPFSPRE+VARVKAILRRGQP D +V +G+ VVD RREAR GEA+ALA REFDLLAH ARNQG+ LSRQQLLD VWGADW+GDDRTVDVHVRQLRKKLGDDLPLATVWG+GYRLG
Sbjct: 7 TVVVIEDDPNIADLLDMYLRDAGFRVLQADCGLRGLDLVEQQRPSLVVLDIGLPDIDGFEVCRRIRARSSVPVLFLTARDGEIDRVLGLELGADDYVTKPFSPREIVARVKAILRRGQPDTRDDHNVVHVGEAYVVDIIRREARHGGEAIALAAREFDLLAHFARNQGIVLSRQQLLDGVWGADWFGDDRTVDVHVRQLRKKLGDDLPLATVWGVGYRLG 226
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A539DSF2_9ACTN (Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DSF2_9ACTN) HSP 1 Score: 343 bits (880), Expect = 1.030e-117 Identity = 168/220 (76.36%), Postives = 188/220 (85.45%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
++VV+EDD NIADLV+LYLR AGFRVL +G RGL+LI QH P L VLD+GLP IDGFEVCRR+RAT+ +PVLFLTARD E+DRVLGLELGADDYVTKPFSPRELVARVKAILRRG PAT+ T IGD I +D ARRE G VALAT+EFDLLA ARNQG+AL+RQQL++ VWGADWYGDDRTVDVHVRQLRKK+GDDLPLATVWG+GYRLG
Sbjct: 11 SIVVIEDDANIADLVNLYLREAGFRVLLAGTGIRGLDLIEQHRPSLAVLDIGLPDIDGFEVCRRIRATTMLPVLFLTARDGEIDRVLGLELGADDYVTKPFSPRELVARVKAILRRGAAAPATESTSFDIGDGITIDVARREVSCGGTTVALATKEFDLLAFFARNQGIALARQQLIEGVWGADWYGDDRTVDVHVRQLRKKVGDDLPLATVWGVGYRLG 230
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A3M2GXG9_ACTSX (DNA-binding response regulator n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GXG9_ACTSX) HSP 1 Score: 313 bits (801), Expect = 9.890e-106 Identity = 162/220 (73.64%), Postives = 177/220 (80.45%), Query Frame = 1
Query: 4 VVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPG-IDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRR-GQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRL 657
VVVVEDDPNIADLV+LYLR GFR Q SGER LE+I Q P LV+LD+GLPG IDG EVCRR+R S VP++FLTARDDE+DRVLGLELGADDYVTKPFSPRELVARVKAILRR G A + +G IVVD RRE V GE VALA REFDLLAHLA N+GLALSR+QLLD VWG DW GD+RTVDVHVRQLRKKLG+ L L TVWG+GYRL
Sbjct: 7 VVVVEDDPNIADLVELYLRREGFRPYQADSGERALEVIAQRRPSLVLLDIGLPGEIDGIEVCRRLRRDSQVPIVFLTARDDEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRAGARADAAAPGPIDLGGGIVVDRGRREVTVDGEPVALAAREFDLLAHLAENRGLALSRRQLLDGVWGPDWVGDERTVDVHVRQLRKKLGEGLALTTVWGVGYRL 226
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A538H7B4_9ACTN (Response regulator transcription factor n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538H7B4_9ACTN) HSP 1 Score: 308 bits (789), Expect = 6.400e-104 Identity = 155/220 (70.45%), Postives = 181/220 (82.27%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPG-IDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRL 657
T+VVVEDD NIADL++LYLR G+RV+Q +GE GL + P LVVLD+GLPG +DG EVCRR+R+T+ VPV+ LTARD+E+DRVLGLELGADDYVTKPFSPRE+VARVKAILRR + +++IG + VD ARREARV G +ALATREFDLL +LA N+GLALSRQQLLD VWG WYGD+RTVDVHVRQLRKKLGD LPLATVWG+GYRL
Sbjct: 7 TIVVVEDDHNIADLLELYLRREGYRVVQAETGEDGLAAVHDQRPRLVVLDIGLPGGVDGLEVCRRLRSTTDVPVIMLTARDEEVDRVLGLELGADDYVTKPFSPREVVARVKAILRRAEGSGREPADVIAIGT-VEVDAARREARVAGRPIALATREFDLLRYLAENRGLALSRQQLLDGVWGPGWYGDERTVDVHVRQLRKKLGDGLPLATVWGVGYRL 225
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A538FP84_9ACTN (Response regulator transcription factor n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FP84_9ACTN) HSP 1 Score: 308 bits (789), Expect = 6.860e-104 Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPG-IDGFEVCRRVRAT---SAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
T+VVVEDDPNIADLVD+YLR GFRVLQ G G +++ + P LV+LDVGLPG +DG E+CRR+RA + +PVL LTARD E+DRVLGLELGADDYVTKPFSPRELVARVKAILRR + P + ++++GD + VD+ RREARV G AVALATREFDLL +LA N+GLALSRQQLLD VWG WYGD+RTVDVHVRQLRKKLG LPL TVWG+GYRLG
Sbjct: 7 TIVVVEDDPNIADLVDMYLRREGFRVLQAGDGTAGWDIVSRERPRLVILDVGLPGEVDGLELCRRLRAAPGRAGLPVLMLTARDGEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRTEG-PREEPDVIAVGD-VEVDKGRREARVGGSAVALATREFDLLRYLAENEGLALSRQQLLDGVWGHGWYGDERTVDVHVRQLRKKLGPALPLVTVWGVGYRLG 228
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Match: A0A6I3CCY7_9ACTN (Response regulator n=2 Tax=root TaxID=1 RepID=A0A6I3CCY7_9ACTN) HSP 1 Score: 309 bits (792), Expect = 7.950e-104 Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 1
Query: 1 TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDVGLPGIDGFEVCRRVRATSAVPVLFLTARDDELDRVLGLELGADDYVTKPFSPRELVARVKAILRRGQPVPATDRTIVSIGDDIVVDEARREARVRGEAVALATREFDLLAHLARNQGLALSRQQLLDAVWGADWYGDDRTVDVHVRQLRKKLGDDLPLATVWGIGYRLG 660
T+VVVE DPNIADL+D YLR+AGFRV+ +GE+GL++I Q SP LVV+ LP IDGFEVCRR+ + +PVLFLT+RD E+DR LG+ELGADDYVTKPFSPRE+VAR KA+LRRG D I++IGDD +D A RE V+GEAVAL TREFDLL H+A NQG AL+R+ LLD+VWG DWYGD+ TVDVH+RQLR KLG++LPLA VWG GYRLG
Sbjct: 44 TIVVVEHDPNIADLLDTYLRSAGFRVILASTGEQGLKIINQTSPALVVVATALPDIDGFEVCRRLPPSRVIPVLFLTSRDGEVDRTLGVELGADDYVTKPFSPREIVARAKAMLRRGHASATADADIITIGDDFRIDLAGREVHVKGEAVALTTREFDLLVHMASNQGTALARRALLDSVWGGDWYGDEGTVDVHIRQLRSKLGEELPLAPVWGFGYRLG 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21156.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21156.1.1 >prot_P-wetherbeei_contig21156.1.1 ID=prot_P-wetherbeei_contig21156.1.1|Name=mRNA_P-wetherbeei_contig21156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp TVVVVEDDPNIADLVDLYLRNAGFRVLQGPSGERGLELIGQHSPVLVVLDback to top mRNA from alignment at P-wetherbeei_contig21156:299..961- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21156.1.1 ID=mRNA_P-wetherbeei_contig21156.1.1|Name=mRNA_P-wetherbeei_contig21156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig21156:299..961- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21156:299..961- >mRNA_P-wetherbeei_contig21156.1.1 ID=mRNA_P-wetherbeei_contig21156.1.1|Name=mRNA_P-wetherbeei_contig21156.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig21156:299..961- (Phaeothamnion wetherbeei SAG_119_79)back to top |