mRNA_P-wetherbeei_contig21131.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A6A7M659_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M659_9PROT) HSP 1 Score: 288 bits (737), Expect = 2.000e-93 Identity = 147/242 (60.74%), Postives = 184/242 (76.03%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHP-KLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
M SE+ ++ SLYDAALGHRSW +VG LV ++DG TLMLS H + AVDVV+TLGMS Q L YG +YA HDVWALGA++ +F RA+ G+ VE+R LERSLIYNEF+ P +LNMHHL G++L L+ G V+G+HRPR AKDY P ++RRL LLLPH++RALEIR RL++A+ +S +A DRLS+GV+LM TG+L HVNAA DAIL DGLMR P+G+RA K+DDK LQELI
Sbjct: 1 MSLASENGVVESLYDAALGHRSWGEVGRGLVSNLDGLTLMLSVHHQKHPAVDVVSTLGMSPQQLRMYGEYYARHDVWALGAVEQRLFGRALAGSQVVEDRVLERSLIYNEFIGPQRLNMHHLVGAILPLDDGHHVVVGVHRPRAAKDYDPGEVRRLGLLLPHLQRALEIRQRLRQAETIGQSATAAFDRLSLGVVLMGPTGKLLHVNAAADAILRGGDGLMRVPDGIRAMAKQDDKRLQELI 242
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C8PSZ2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSZ2_9HYPH) HSP 1 Score: 288 bits (737), Expect = 2.120e-93 Identity = 138/241 (57.26%), Postives = 181/241 (75.10%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
MP + E +L+ LYDAALGHR+W + GP LVR +DGHTLMLS H+P +AVD+V+TLGM+ + L +YG YA HD+WALGA++ +F+R V G +AV+ R LERSLIYNE+L PKL+MH+L G+LL L+ G VLGIHRPRDA DY+P D+RRL +LPH+RRALE+R RL+R Q R+ + LDRL +GV+L++ TG L H NAA DA+L ++DGL LRAG+ +DD+ LQ LI
Sbjct: 1 MPSVGERKLVADLYDAALGHRAWGEAGPQLVRFLDGHTLMLSVHNPLGQAVDLVSTLGMTAEDLRQYGEHYARHDLWALGAVEKRLFERPVTGAEAVDYRVLERSLIYNEYLRPKLDMHYLLGALLTLDSGHSVVLGIHRPRDAADYTPDDVRRLGRILPHLRRALEVRQRLKRETQAGRATLAVLDRLKLGVVLLAPTGALVHANAAADAVLRADDGLTHARGSLRAGKADDDRRLQALI 241
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C5TDN7_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TDN7_9HYPH) HSP 1 Score: 266 bits (680), Expect = 8.910e-85 Identity = 130/237 (54.85%), Postives = 167/237 (70.46%), Query Frame = 1
Query: 13 SEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
+E LIG LYDAALGHR WDDVGP LVR + G TL+LS H P AVD+VTTLGM+ L +Y +YA HD+WA A++ G+F + + G V+ ERSL YNEFL PK+N+HH+AGSL+ L+ G +V+GIHRPRD Y P DI+ L +LPH++RALE+R +LQ RS+ +A D LS+GV+L+ ATG+L H NA+G AIL DGLMR+ GLRA R +DDK LQ L+
Sbjct: 5 AEGALIGDLYDAALGHRPWDDVGPDLVRLVGGRTLLLSVHSPLGEAVDLVTTLGMAADDLQQYSAYYAQHDIWAQSAMRQGLFGQPLTGDQLVDSHTFERSLFYNEFLRPKVNIHHVAGSLMALDSGDFSVIGIHRPRDGAAYDPADIQALGRVLPHLQRALEVRQKLQHPAAPDRSLLAAFDWLSLGVVLLGATGKLIHANASGSAILAQGDGLMRSVAGLRAARGDDDKRLQALL 241
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A512NS25_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS25_9HYPH) HSP 1 Score: 255 bits (651), Expect = 1.660e-80 Identity = 126/241 (52.28%), Postives = 172/241 (71.37%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
M RL E+ LI SLYDAALGH +W+ G + ++ TLMLS HDP + DVV TLGM+ + + EYG F A HDVWALGAL +F +A+ G + VE+ A +RS IYNE+L P ++ ++ GSL+RL+GG A +G+HRP A+ ++P+D RL+ LLPH++RALE+R R+Q + ++ + LDRLS+GV L+SATGRL HVNAAG+ IL + DGL RTP+G+RA ++DDK LQ LI
Sbjct: 1 MDRLKENGLIESLYDAALGHHAWEQAGHQIREYMGSKTLMLSTHDPLHKRADVVLTLGMTARQVQEYGHF-AQHDVWALGALDRRIFGKALVGEEVVEDDAFKRSYIYNEYLKPSIDARYMVGSLVRLQGGNHAAIGVHRPHGARSFTPEDAERLNRLLPHVQRALEVRQRVQGIEHKADATNFVLDRLSLGVFLISATGRLLHVNAAGEEILKNGDGLQRTPDGIRACNRDDDKRLQHLI 240
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A259MD66_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MD66_9PROT) HSP 1 Score: 196 bits (498), Expect = 1.550e-57 Identity = 104/236 (44.07%), Postives = 145/236 (61.44%), Query Frame = 1
Query: 16 EHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
+ ELI Y AA+G WD VG + R + G +L L+ DP VD V LG S+ Y +A HD+WALGA+K + R++ G+ V R LERS IYNEFL P +N+H+LAG++L L G AVLG+HRPRDA+D+ P+D+ LD +LPH++RALEIRH++Q + + + +S + LS GVI + TG + N+ G+ +L DGL+ L+A K D LQ LI
Sbjct: 6 QSELIQDFYRAAIGQHPWDSVGRSIARSLGGLSLNLTLRDPGPGTVDQVANLGGSEAARKLYTDHFAEHDLWALGAVKKRLVGRSMTGSTVVANRILERSKIYNEFLLPTVNVHYLAGAILSLPNGRHAVLGVHRPRDARDFGPEDLHVLDSVLPHLQRALEIRHKVQAFEAMAHNGFSMFEMLSSGVIALGPTGLISFSNSIGERLLRRADGLVSAAGKLKALVKHQDSKLQHLI 241
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C8PSR5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSR5_9HYPH) HSP 1 Score: 167 bits (423), Expect = 3.230e-46 Identity = 92/241 (38.17%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
M ++ ELI LYDAALG W DV L+ + D TL L+ + P + D V + G + Y + A D A A++ +F+RAV G+D V++ L RS IY+EFL P L HL G L L G V G HRP +A+ + D+RRLD LLPH+RRALE+R L A+ +R + LD L G ++++A G + H NA + ++ DGL + + L A R + L+ I
Sbjct: 1 MKPATDMELITRLYDAALGRVDWQDVADLITQSFDSVTLTLAIYRPTSSVPDFVASRGFTPAQRRAYQEHFFAQDPVAAEAMRRQIFNRAVLGSDLVDDDTLRRSAIYSEFLRPDLKAFHLLGGELPLPHGELVVFGTHRPEEARPFVHADVRRLDRLLPHLRRALEMRQTLHLAEAHARPLQGTLDLLPCGAVMVAADGLITHANAVAERLIAHGDGLGQRDQRLHAARADQHSQLRRAI 241
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A1Q3LPJ4_9PROT (HTH luxR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3LPJ4_9PROT) HSP 1 Score: 156 bits (394), Expect = 5.860e-42 Identity = 99/251 (39.44%), Postives = 131/251 (52.19%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRA----------VLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
M E E +G LYDAALGH +W +VG L DG TL +A VD++T LG++ + YG Y D W + AL+ GVFDRAV GTD V + ++S IY E + P ++ H ++ L GG LGIHRPR A + L LLPHI RAL++R RL Q + +ALD LS GV+ +SA GRL N A ++ +NDGL+ T + A DD+ LQ I
Sbjct: 1 METRQETEAVGLLYDAALGHVAWSEVGRCLRALFDGSTLTFTAQYASDGPVDMLTMLGITPKEAELYGAHYYQDDPWRVAALERGVFDRAVLGTDLVSDLDWQQSRIYCELVKPNTDVFHGVMAVGSLPGGGPLEGXXXXXGVYALGIHRPRRASPFDRSATEILQRLLPHIGRALQVRGRLDMGQQAATGAAAALDCLSFGVVQLSAAGRLVTANRAALDMMAANDGLLVTAGIVHALSPGDDERLQRAI 251
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A1Q3KVT9_9PROT (HTH luxR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KVT9_9PROT) HSP 1 Score: 148 bits (374), Expect = 3.390e-39 Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 1
Query: 1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
M L+E EL+G LYD ALG +W V L + +D ++ DP+ + ++ T + + + Y T + HD WA GA +LGV+++ G D V+ ERS YN+FL + + +HLAG+L+ G ++G HRP+ + +S + + +LD LLPHI RA E+ L A + LD++ +G I ++ RL H N A IL S DGL +RA + DD+ LQ LI
Sbjct: 1 MTELTESELVGLLYDTALGRATWSKVVEALGQLLDCGSVYFG--DPQDVSSEIAATYRIPSRFVELYQTEFYKHDPWATGAARLGVYNKVKRGGDLVDRAVFERSAFYNDFLRHETDAYHLAGALVGRPHGRSLIVGCHRPKALEAFSDEALAQLDRLLPHISRAAEVHQSLLVA-------HDTLDQMPLGTIQLNREARLLHANEAAQHILRSEDGLELANNHIRATGRNDDQALQRLI 232
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A512NS06_9HYPH (Transcriptional regulator n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS06_9HYPH) HSP 1 Score: 146 bits (369), Expect = 1.880e-38 Identity = 94/235 (40.00%), Postives = 122/235 (51.91%), Query Frame = 1
Query: 28 IGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHH---LAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
+G LYDAALGH W VG L +DG TL +A T +D V G+++ + Y T Y A D+W A+ + DR V TD V + S IY E P ++ H + G+LL E G+ + LGIHRP +A ++ RL LLPHI RAL++R RL A R+ + LDR + GVI + A G NAA IL NDGL+ GLRA DD LQ I
Sbjct: 1 MGLLYDAALGHADWAHVGARLASLVDGATLTFTAQYAPTAGIDFVDMKGVTQAEIELYATQYLADDLWRNAAIGRQIVDRVVLNTDLVSDLDWRNSRIYTELCRPNTDIFHGVMVTGTLL--EQGLFS-LGIHRPHNASPFNAAAASRLQRLLPHIGRALQVRSRLGLAGAEQRASMAVLDRFAFGVIQLGARGVFISANAAARRILDCNDGLVLGRLGLRAASAADDTRLQRAI 232
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A840Y294_9PROT (DNA-binding CsgD family transcriptional regulator n=1 Tax=Roseomonas pecuniae TaxID=693023 RepID=A0A840Y294_9PROT) HSP 1 Score: 112 bits (281), Expect = 1.150e-25 Identity = 84/248 (33.87%), Postives = 114/248 (45.97%), Query Frame = 1
Query: 19 HELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKL------GVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAA-------GDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
H L G YDAA+G WD VG L+ + G T DPR VD + + L Y +Y A D+W G L L G A+ GT+ V E + RS IYN+F+ M L G++ L LGIHRP DA+ Y ++ L L LPH+RRAL +RHRL+ A++ + LD L + ++ A RL N A G + G P + A R D L+ L+
Sbjct: 7 HVLAGLAYDAAMGECGWDAVGHALLALVGGRTATFWVGDPRRGEVDTLFA-SAPPEALQLYAEYYCARDIWTQGYLDLMRARGMGADTPAMIGTELVSESEVRRSEIYNDFMRG-FGMFDLVGNVSPLGDAGFLTLGIHRPEDAERYGVRERDLLGLALPHLRRALRLRHRLKAAEEAP----AVLDLLPMAGAVVDAGLRLVQANRAALALAAPGGPLRLERCGAPAGPPLVTAARVADRAVLERLV 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21131.1.1 >prot_P-wetherbeei_contig21131.1.1 ID=prot_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAback to top mRNA from alignment at P-wetherbeei_contig21131:3..725- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21131.1.1 ID=mRNA_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig21131:3..725- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21131:3..725- >mRNA_P-wetherbeei_contig21131.1.1 ID=mRNA_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig21131:3..725- (Phaeothamnion wetherbeei SAG_119_79)back to top |