mRNA_P-wetherbeei_contig20949.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI001BA53E1B (Flp family type IVb pilin n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BA53E1B) HSP 1 Score: 55.1 bits (131), Expect = 6.650e-9 Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M + F DE+GATAIEYAL+A GI + I++VVG +GSSL+G FA+V
Sbjct: 1 MRALLTRFVDDEAGATAIEYALVAGGISIVIVTVVGGIGSSLSGTFASV 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI001E38EE8D (Flp family type IVb pilin n=1 Tax=Bradyrhizobium oropedii TaxID=1571201 RepID=UPI001E38EE8D) HSP 1 Score: 54.7 bits (130), Expect = 9.450e-9 Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M +++FC DE+GATAIEY LIA+G+ +AII+ V VG+ L+G ++TV
Sbjct: 1 MKKLVQNFCADETGATAIEYGLIATGVAIAIIAAVKGVGTKLSGTYSTV 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: A0A0A8K956_9HYPH (Flp pilus assembly protein, pilin Flp n=2 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A0A8K956_9HYPH) HSP 1 Score: 54.7 bits (130), Expect = 1.080e-8 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 13 IESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
I+ F DESGATAIEY LIA+GI +AII++V VG +LTGIF V
Sbjct: 4 IKRFINDESGATAIEYGLIAAGIAVAIITIVSTVGGTLTGIFTNV 48
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI00190A2389 (Flp family type IVb pilin n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI00190A2389) HSP 1 Score: 54.3 bits (129), Expect = 1.340e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M + F DESGATAIEY LIA+GI +AII+VV Q+G+ L G FA++
Sbjct: 1 MKNLVSRFVKDESGATAIEYGLIAAGIALAIIAVVNQLGTQLNGKFASI 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI0009F3BFD9 (Flp family type IVb pilin n=1 Tax=Candidatus Viadribacter manganicus TaxID=1759059 RepID=UPI0009F3BFD9) HSP 1 Score: 53.9 bits (128), Expect = 1.820e-8 Identity = 32/48 (66.67%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 13 IESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATVAAG 156
I F DE GATAIEYALIAS I + II+ VG VG SLTGIF AAG
Sbjct: 2 ITRFLRDERGATAIEYALIASLIGLVIITAVGAVGDSLTGIFDDAAAG 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: A0A7Y8MBE7_9PROT (Flp family type IVb pilin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MBE7_9PROT) HSP 1 Score: 53.9 bits (128), Expect = 1.910e-8 Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATVAAG 156
M I FC DESGATAIEY LIA+GI +AII+ V VG +L+ +F T AG
Sbjct: 1 MRKLITRFCADESGATAIEYGLIAAGIAVAIIAAVQGVGGNLSTLFGTDIAG 52
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: A0A560L9P6_9BRAD (Pilus assembly protein Flp/PilA n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A560L9P6_9BRAD) HSP 1 Score: 53.9 bits (128), Expect = 1.910e-8 Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATVA 150
M F F DESGATAIEY LIA+GI +AII+ V VG++L+G F+T+A
Sbjct: 1 MKAFFVRFLRDESGATAIEYGLIATGIAIAIIAAVNGVGTNLSGTFSTIA 50
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: V4RFA7_9HYPH (Flp/Fap pilin component n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4RFA7_9HYPH) HSP 1 Score: 53.9 bits (128), Expect = 1.950e-8 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M I+ F DESGATAIEY LIA+GI +AII +V +G SLTG F +V
Sbjct: 1 MKALIQRFARDESGATAIEYGLIAAGISVAIIVIVNTLGESLTGTFTSV 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI001BAD8A2D (Flp family type IVb pilin n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAD8A2D) HSP 1 Score: 53.5 bits (127), Expect = 2.710e-8 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M F+ F DESGATAIEY LIA+GI +AII+ V VG++L G F T+
Sbjct: 1 MKAFVVKFFQDESGATAIEYGLIAAGIAIAIITAVNGVGTALNGTFGTI 49
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Match: UPI001BAB8F6B (Flp family type IVb pilin n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BAB8F6B) HSP 1 Score: 53.5 bits (127), Expect = 2.710e-8 Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATV 147
M FI F DESGATAIEY LIA+GI +AII+ V VG++L+G F+T+
Sbjct: 1 MRTFIVRFLRDESGATAIEYGLIATGIAIAIIAAVNGVGTALSGTFSTI 49 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20949.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20949.1.1 >prot_P-wetherbeei_contig20949.1.1 ID=prot_P-wetherbeei_contig20949.1.1|Name=mRNA_P-wetherbeei_contig20949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=55bp MLGFIESFCVDESGATAIEYALIASGIFMAIISVVGQVGSSLTGIFATVAback to top mRNA from alignment at P-wetherbeei_contig20949:188..352- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20949.1.1 ID=mRNA_P-wetherbeei_contig20949.1.1|Name=mRNA_P-wetherbeei_contig20949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig20949:188..352- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20949:188..352- >mRNA_P-wetherbeei_contig20949.1.1 ID=mRNA_P-wetherbeei_contig20949.1.1|Name=mRNA_P-wetherbeei_contig20949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig20949:188..352- (Phaeothamnion wetherbeei SAG_119_79)back to top |