prot_P-wetherbeei_contig20937.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20937.1.1
Unique Nameprot_P-wetherbeei_contig20937.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length251
Homology
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A3N9VCB9_9DELT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A3N9VCB9_9DELT)

HSP 1 Score: 214 bits (545), Expect = 2.520e-64
Identity = 108/208 (51.92%), Postives = 141/208 (67.79%), Query Frame = 0
Query:   34 SAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQEGGRRNK 241
            +A V +G+ +IRSPI GRTG L + +G LV+AN    L+TI++I PI V+F+VPEK L EI +      L VEA  P      E+G+++F++N VD TTGTI ++  F N  RRLWPG+FV V L L  +PNA++VP+HAVQ GQ G +VFVVK D+TVE RPV    TY + ++I+ GL  GETVVTDGQLQL+PG  V  G    K
Sbjct:  174 NAAVMLGYCFIRSPIDGRTGNLMVQQGNLVKANDVPILVTINQINPIYVTFSVPEKELAEINKHMAAGDLKVEALIPSDTGPAEQGIISFLDNMVDPTTGTIKIKGTFANRQRRLWPGQFVNVVLTLASIPNAVIVPAHAVQTGQDGLFVFVVKPDRTVEFRPVVTGVTYYNDTVIEKGLNDGETVVTDGQLQLSPGTRVTFGSENVK 381          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: Q39V42_GEOMG (Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter TaxID=28231 RepID=Q39V42_GEOMG)

HSP 1 Score: 213 bits (541), Expect = 1.690e-63
Identity = 109/216 (50.46%), Postives = 146/216 (67.59%), Query Frame = 0
Query:   31 AAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQEGGRRNKKGPGS 246
            A  +A V++ + +IRSP+ GRTG L +  G +V+AN   PL+TI++ITP+ V+F++PEK L E++R      LAVEA  P+     E+G+++F++NTVD  TGTI L+  F N  RRLWPG+F  V + L   PNAIVVP+ A+Q GQSG YVFVVK D +VE+RPVT    Y   +II+ GL  GE VVTDGQ++LTP A V E     K GPG+
Sbjct:  177 AVENAKVELSYCFIRSPLTGRTGNLAVHAGNIVKANENPPLVTINQITPVYVAFSIPEKDLAEVKRRMAAGKLAVEATIPNDAGPAEQGMISFLDNTVDVATGTIKLKGTFENRARRLWPGQFANVVVTLAARPNAIVVPAQAIQTGQSGPYVFVVKADSSVEIRPVTPGIAYEGVTIIEQGLAPGERVVTDGQMRLTPKARVTE-----KPGPGT 387          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A2V9R140_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9R140_9BACT)

HSP 1 Score: 212 bits (540), Expect = 3.170e-63
Identity = 111/227 (48.90%), Postives = 148/227 (65.20%), Query Frame = 0
Query:    8 EATVQADMASXXXXXXXXXXXXXAAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQ 234
            +AT+QAD AS             A  +A +Q+G+  IRSP+ GRTG L + +G +V+AN + PL+ I++I P+  +F+VPE+YL EI++      LAV A  P  ++   +GV+ FI+NTVD TTGTI L+  F N  + LWPG+FV V L L   PN +VVPS AVQ GQ+G YVFVVK D TVE RPV +  +     +I+ GLK GETVV DGQL+LTPGA V+
Sbjct:  179 DATIQADKASLEYSSAAIRSDKAAIENAKLQLGYCTIRSPMDGRTGNLIVHQGNIVKANDSPPLVIINQIQPMYATFSVPEQYLSEIKKHMAAGKLAVAATPPKEETNAVQGVLTFIDNTVDNTTGTIRLKGTFANREKHLWPGQFVNVVLTLSTQPNTVVVPSRAVQTGQTGQYVFVVKPDLTVESRPVVIGTSLSSEVVIERGLKPGETVVIDGQLRLTPGAKVE 405          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A7V3XEC6_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3XEC6_9BACT)

HSP 1 Score: 212 bits (539), Expect = 5.080e-63
Identity = 112/211 (53.08%), Postives = 146/211 (69.19%), Query Frame = 0
Query:   37 VQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQEGGRRNKKGPGST 247
            +Q+G+T IRSPI GRTG L + +G LV+AN T  L+ I +I+PI V+F+VPE+ L EIR+      L VEA  P+ ++ P KGV+ F++NTVD TTGTI L+  F N  +RLWPG+FV V L L   PNA+V PS A+Q GQ G YVFV+K D TVE RPV V  T+GD ++I+ GL+ GE VVTDGQL+L PG  V+      K GPG++
Sbjct:  214 LQLGYTSIRSPIDGRTGDLMVHQGNLVKANDTV-LVAIHQISPIYVTFSVPEQELPEIRKYMAAGKLEVEAIVPNEEAHPVKGVITFVDNTVDRTTGTIQLKGTFDNEEKRLWPGQFVNVVLTLTTQPNAVVAPSQAIQNGQEGQYVFVIKPDLTVESRPVVVARTFGDETVIERGLQPGEKVVTDGQLRLAPGVKVEV-----KNGPGNS 418          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A354CYP5_9BACT (Efflux RND transporter periplasmic adaptor subunit (Fragment) n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A354CYP5_9BACT)

HSP 1 Score: 204 bits (520), Expect = 1.800e-62
Identity = 108/227 (47.58%), Postives = 147/227 (64.76%), Query Frame = 0
Query:    8 EATVQADMASXXXXXXXXXXXXXAAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQ 234
            EA VQAD A              A  +A VQ+G+ YI S + GRTG+L + EG LV+ N  TPL+ I++++PI V+F+VPE++L EI++      L V+A  P  +   E+GVV+F++N VD TTGTI L+  F N +RRLWPG+FV   + L   P+A+VVP+ AVQ GQ G +VFVV  +KT E+R V V+ T    ++I+ GLK GETVVTDGQ QL PG  V+
Sbjct:   17 EAVVQADKA--------------AVENAKVQLGYCYIYSSVTGRTGSLLVSEGNLVRVNDATPLLVINQVSPIYVNFSVPEQHLSEIKKRMASGQLKVDAIFPQNEDLGEQGVVSFVDNAVDRTTGTIRLKGTFANSSRRLWPGQFVNALVTLATQPDAVVVPAQAVQAGQDGQHVFVVTSEKTAELRKVVVNRTVDGEAVIEEGLKPGETVVTDGQFQLAPGVKVE 229          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A7C3RPI4_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C3RPI4_9BACT)

HSP 1 Score: 204 bits (520), Expect = 5.950e-62
Identity = 101/203 (49.75%), Postives = 137/203 (67.49%), Query Frame = 0
Query:   31 AAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASV 233
            A  +A V + +T I SPI GRTG L +  G LV+AN+ T ++TI++I P+ V F++PEK L ++R      PL V    P  K   E+G ++FI+N VD+TTGTI+L+  F N   RLWPG+FV VTL++RR+P+ +VVPS AVQ GQ G YVFVV +    E+R V +  T G  +++  GLK GETVVTDGQL+L PGA+V
Sbjct:   60 AVQTAQVNLSYTRIHSPIDGRTGNLIVHAGNLVKANADTAMVTINQIRPVYVDFSIPEKDLDQVRANMAEHPLPVFVTTPTDKDERERGYLSFIDNQVDSTTGTILLKGTFKNANERLWPGQFVNVTLIVRRMPDQVVVPSQAVQTGQDGSYVFVVGEKMKAEMRKVVLGATVGGDTVVARGLKAGETVVTDGQLRLVPGATV 262          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A1F9CDM3_9DELT (Efflux transporter periplasmic adaptor subunit n=1 Tax=Deltaproteobacteria bacterium RBG_16_64_85 TaxID=1797846 RepID=A0A1F9CDM3_9DELT)

HSP 1 Score: 207 bits (527), Expect = 7.510e-62
Identity = 107/204 (52.45%), Postives = 142/204 (69.61%), Query Frame = 0
Query:   31 AAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQ 234
            A  +A VQ+ + YIRSPI GRTGTL I EG +V+AN +T L+TI+++TPI ++F+VPE+YL  IR+ ++   L VEA  P  +  P +G + FI N VD  TGTI L+  FPN  RRLWPG FV VTL+L   P A++VP+ AVQ GQSG Y+FVV+ D TVE RPV    T    ++I+ G++ GE VVTDGQL+L PG+ V+
Sbjct:  159 AVENARVQLSYCYIRSPIDGRTGTLFIKEGNVVKANDST-LVTINQVTPIYITFSVPEQYLAGIRKYREARTLGVEAVIPGQEDQPVRGALTFISNAVDNATGTIQLKGTFPNQDRRLWPGGFVNVTLILATKPKAVLVPASAVQTGQSGQYIFVVRPDLTVESRPVVTGETGAGETVIEKGVQAGERVVTDGQLRLVPGSRVE 361          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A6I1KH69_9DELT (Putative multidrug efflux transporter n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A6I1KH69_9DELT)

HSP 1 Score: 207 bits (527), Expect = 1.380e-61
Identity = 110/218 (50.46%), Postives = 148/218 (67.89%), Query Frame = 0
Query:   34 SAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQ-----EGGRRNKKGPGS 246
            +A + + +  IRSPI GRTG L +  G LV+AN    L+TI++I P+ V+F+VPEK L EI++      L VEA  P+   A E+GV++F++NTVDT TGTI L+  FPN TRRLWPG+FV V L L   P A+VVP+ A+Q GQ G Y+FVVK D++V++RPVTV       ++I+ G++ GETVVTDGQL+LTPGA V+       G R K+  GS
Sbjct:  157 NARLLLAYCSIRSPIDGRTGNLMVQMGNLVKANDNPVLVTINQINPVYVTFSVPEKELLEIKKYLAGGSLHVEAVIPNDPKAAEEGVISFLDNTVDTATGTIKLKGTFPNKTRRLWPGQFVNVVLTLAAKPKAVVVPTQAIQTGQQGAYLFVVKADRSVDIRPVTVGTALNGETVIEKGVQPGETVVTDGQLRLTPGAKVEFRQGAGNGNREKREAGS 374          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A2V8TZV2_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8TZV2_9BACT)

HSP 1 Score: 209 bits (532), Expect = 1.840e-61
Identity = 113/219 (51.60%), Postives = 152/219 (69.41%), Query Frame = 0
Query:   33 ASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQEGGRRNKKGPGSTGLPG 251
            A+A VQ+G+T IRSPI GRTG L + +G +V AN T+ LITI++I PI V+FAVPE  L EI+R   +  L V A + D ++ PE+G + F++N VD TTGTI L+  F N+  +LWPG++V VTL L   PNA+VVP+ AVQ GQ+G +V+VVK+D+TVEVRPV+         +I+ GL  GETVVT+GQL+L PG+ VQ    R+K+G G    PG
Sbjct:  255 ANAKVQLGYTSIRSPIDGRTGNLMVKQGNVVTAN-TSDLITINQIEPIYVTFAVPEVRLPEIKRYMAQGKLPVIAKSQDSEAQPEQGHLTFVDNNVDMTTGTIKLKGTFQNVGHKLWPGQYVNVTLRLTTQPNALVVPNQAVQSGQNGQFVYVVKEDRTVEVRPVSTGARVDQDLVIENGLDAGETVVTEGQLRLAPGSRVQLRDSRDKQGQGRGKAPG 472          
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Match: A0A1F9A9E0_9DELT (Efflux transporter periplasmic adaptor subunit (Fragment) n=1 Tax=Deltaproteobacteria bacterium GWD2_55_8 TaxID=1797823 RepID=A0A1F9A9E0_9DELT)

HSP 1 Score: 202 bits (515), Expect = 2.740e-61
Identity = 110/227 (48.46%), Postives = 145/227 (63.88%), Query Frame = 0
Query:    8 EATVQADMASXXXXXXXXXXXXXAAASAGVQVGFTYIRSPIKGRTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQRSPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWPGEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVDFTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQ 234
            EA VQAD A              A  +A VQ+G+ YI S + GRTG+L + EG LV+ N  TPL+ I++++PI V+F +PE+ L EI++      L V+A  P  ++  E+G + F++N VD TTGTI L+A F N  RRLWPG FV V + L   P+A+VVPS AVQ GQ G +VFVVK D+TVE+R V V+ T    ++I  GLK GETVVTDGQ QL PG  V+
Sbjct:   49 EAVVQADKA--------------AVENAKVQLGYCYIYSSVTGRTGSLLVNEGNLVRVNDATPLLVINQVSPIYVNFTLPEQNLQEIKKRMAGGKLGVQAIIPRNEALDEQGALGFVDNAVDRTTGTIRLKATFANDARRLWPGAFVNVLVTLAMQPDAVVVPSQAVQTGQEGQHVFVVKSDQTVELRKVIVNRTVNSEAVIDEGLKPGETVVTDGQFQLAPGVKVE 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20937.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N9VCB9_9DELT2.520e-6451.92Efflux RND transporter periplasmic adaptor subunit... [more]
Q39V42_GEOMG1.690e-6350.46Efflux pump, RND family, membrane fusion lipoprote... [more]
A0A2V9R140_9BACT3.170e-6348.90Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7V3XEC6_9BACT5.080e-6353.08Efflux RND transporter periplasmic adaptor subunit... [more]
A0A354CYP5_9BACT1.800e-6247.58Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7C3RPI4_9BACT5.950e-6249.75Efflux RND transporter periplasmic adaptor subunit... [more]
A0A1F9CDM3_9DELT7.510e-6252.45Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A6I1KH69_9DELT1.380e-6150.46Putative multidrug efflux transporter n=1 Tax=Geob... [more]
A0A2V8TZV2_9BACT1.840e-6151.60Efflux RND transporter periplasmic adaptor subunit... [more]
A0A1F9A9E0_9DELT2.740e-6148.46Efflux transporter periplasmic adaptor subunit (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.170coord: 57..158
e-value: 1.4E-27
score: 97.9
NoneNo IPR availableGENE3D2.40.420.20coord: 161..246
e-value: 9.7E-17
score: 62.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..251
NoneNo IPR availablePANTHERPTHR30469:SF12MULTIDRUG RESISTANCE PROTEIN MDTAcoord: 10..239
NoneNo IPR availablePANTHERPTHR30469MULTIDRUG RESISTANCE PROTEIN MDTAcoord: 10..239
NoneNo IPR availableSUPERFAMILY111369HlyD-like secretion proteinscoord: 17..158
IPR032317RND efflux pump, membrane fusion protein, barrel-sandwich domainPFAMPF16576HlyD_D23coord: 42..154
e-value: 1.1E-12
score: 47.7
IPR006143RND efflux pump, membrane fusion proteinTIGRFAMTIGR01730TIGR01730coord: 7..235
e-value: 5.1E-54
score: 181.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20937contigP-wetherbeei_contig20937:378..1130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20937.1.1mRNA_P-wetherbeei_contig20937.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20937 378..1130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20937.1.1 ID=prot_P-wetherbeei_contig20937.1.1|Name=mRNA_P-wetherbeei_contig20937.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
RASISSAEATVQADMASVRSLQSTVEADRAAAASAGVQVGFTYIRSPIKG
RTGTLNIFEGTLVQANSTTPLITIDEITPIRVSFAVPEKYLGEIRRGQQR
SPLAVEAANPDGKSAPEKGVVNFIENTVDTTTGTIILRADFPNLTRRLWP
GEFVTVTLLLRRVPNAIVVPSHAVQPGQSGDYVFVVKDDKTVEVRPVTVD
FTYGDSSIIKTGLKKGETVVTDGQLQLTPGASVQEGGRRNKKGPGSTGLP
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032317HlyD_D23
IPR006143RND_pump_MFP