Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1975 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1974 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185885.5368254-CDS-P-wetherbeei_contig10806:224..2198 | 1683185885.5368254-CDS-P-wetherbeei_contig10806:224..2198 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig10806 225..2198 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10806.1.1 >prot_P-wetherbeei_contig10806.1.1 ID=prot_P-wetherbeei_contig10806.1.1|Name=mRNA_P-wetherbeei_contig10806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=658bp
LESQPSRWRFTMARGNSQNAVGSADFGAAGGGMNGGGGDGGGLSNTTRSF
DGYDGGVSPGPGGGDHSGLFGVGGIADIIGGGGASKALLFPASSWGTDGS
FEALLDTRGAVLDPDNDPRSLASVTSAAAVLAEAEAVEPVNFTPSEVEYF
LWLGLEEPAEGRWHPAALRVLRGMVRASVPALPLEEQEENGGTGGDGAAG
GSGDNWDRRGTDGSATTVPRARAGSDSALPRPGAVNNAATPPSPSQHRPS
TLSPPPPPPQQQLTIAGTRVAEAVGTLLAAGGRLPRLLLLEELPRTDAEV
VGHVELARLVAAAASPAAPEAARAAVRAAVPTARVLALLRRAVPLQLQAA
LLELLRCLLVLSPPPLPSPSPLQHRGMQSPLPTQASQVPSVAGWQRGGGG
GGGGGGVGVGRPGSAAARLTASGAASAVMALARLSTSPKPSAGPTSTSVT
DTPRSPITEPPSIAGGGGSVRVANGAGSSSASGHGVSARGGAIRECMSTD
LVDAVAAAVAGMRQMAILCWLEQHPHAAVDVDWQQELMSPRTPATPAVSA
ASPFAAAAAAPQPPSEAAAAVSRVAVGPIAAMASAVAAATAAAASAAAAV
VGDDAPPTPASPAPAATPTSGGAWAGAGVIRPGEVVEVRRLLIYVEEGVL
PLALAAAA back to topmRNA from alignment at P-wetherbeei_contig10806:225..2199+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig10806.1.1 ID=mRNA_P-wetherbeei_contig10806.1.1|Name=mRNA_P-wetherbeei_contig10806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1975bp|location=Sequence derived from alignment at P-wetherbeei_contig10806:225..2199+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAATCGCAACCGAGCCGCTGGCGTTTCACCATGGCGCGCGGAAATTC
TCAGAATGCCGTCGGCAGCGCGGATTTCGGGGCGGCTGGCGGCGGCATGA
ACGGTGGCGGCGGCGACGGAGGCGGGCTGAGCAACACGACGCGGAGTTTC
GACGGGTACGACGGTGGCGTCAGCCCGGGCCCTGGCGGCGGCGACCACAG
CGGCCTGTTCGGCGTCGGCGGGATCGCCGACATTATCGGCGGCGGTGGCG
CCAGCAAGGCGCTGCTGTTCCCCGCGTCGAGCTGGGGCACCGACGGCAGC
TTCGAAGCGCTGTTGGACACGCGTGGGGCCGTCTTGGATCCGGACAACGA
CCCGCGCAGCCTGGCATCCGTCACGTCTGCCGCGGCGGTCCTGGCGGAGG
CGGAGGCCGTCGAGCCGGTAAACTTCACGCCGTCGGAGGTCGAATACTTC
CTGTGGCTCGGCCTGGAGGAGCCGGCAGAGGGCCGCTGGCACCCGGCGGC
GCTGCGCGTGCTCCGCGGTATGGTGCGGGCATCCGTGCCGGCGCTGCCGC
TGGAGGAACAGGAAGAGAATGGCGGCACTGGCGGCGACGGCGCTGCTGGC
GGCAGCGGAGACAACTGGGACCGCCGCGGCACGGACGGCAGCGCCACGAC
AGTGCCACGGGCCCGGGCTGGCAGCGACAGTGCGCTGCCGCGTCCGGGCG
CCGTCAACAACGCGGCGACGCCGCCGTCGCCGTCGCAGCACCGGCCGTCG
ACGCTGTCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCTGACCATCGCCGG
CACGCGGGTGGCAGAAGCGGTCGGGACGTTATTGGCGGCGGGCGGGCGGC
TGCCGCGGCTGCTCCTGTTGGAAGAGCTGCCGCGCACGGACGCCGAGGTG
GTGGGGCACGTGGAACTAGCGCGGCTAGTGGCGGCGGCGGCGTCGCCGGC
GGCGCCCGAGGCTGCGCGGGCGGCGGTGCGGGCAGCGGTACCGACGGCAC
GTGTCCTGGCGCTGCTGCGGAGGGCGGTGCCGCTGCAGCTGCAGGCGGCG
CTTCTCGAGCTGCTGCGCTGCCTGCTGGTGTTGTCGCCGCCGCCGCTACC
GTCGCCATCGCCGCTGCAGCATCGCGGCATGCAGTCGCCACTGCCGACGC
AGGCGTCGCAGGTCCCGTCAGTGGCGGGCTGGCAGCGTGGCGGCGGCGGC
GGTGGTGGTGGCGGCGGTGTCGGCGTGGGACGACCGGGTTCCGCTGCGGC
GCGACTCACCGCCAGCGGCGCCGCGTCGGCGGTCATGGCCTTGGCTCGCC
TCAGCACAAGCCCCAAGCCGTCTGCCGGCCCAACCTCGACGTCGGTCACC
GATACGCCGCGGTCGCCGATCACGGAGCCGCCCAGCATTGCCGGCGGCGG
TGGCAGTGTGCGGGTCGCCAACGGCGCCGGGAGCAGCAGCGCCAGCGGGC
ATGGCGTCAGCGCCCGAGGTGGCGCCATTCGCGAATGCATGTCAACCGAC
CTGGTGGACGCCGTGGCGGCCGCCGTGGCAGGGATGCGGCAGATGGCGAT
CCTCTGCTGGCTGGAGCAGCACCCGCACGCCGCGGTGGACGTCGACTGGC
AGCAGGAGCTGATGTCGCCACGGACGCCAGCGACACCTGCGGTGTCAGCA
GCGTCGCCGTTTGCCGCGGCTGCGGCGGCGCCACAACCGCCGTCAGAGGC
GGCGGCGGCGGTGTCGCGGGTGGCGGTGGGGCCGATTGCGGCGATGGCGT
CTGCAGTGGCAGCAGCGACGGCGGCGGCAGCATCTGCGGCGGCGGCAGTG
GTGGGAGACGACGCGCCACCCACACCGGCCTCGCCGGCCCCCGCTGCGAC
GCCGACGTCCGGCGGCGCCTGGGCGGGCGCCGGGGTGATCCGGCCGGGGG
AGGTGGTCGAAGTGCGTCGGCTCCTCATCTATGTGGAAGAAGGCGTCCTC
CCGCTGGCGCTGGCGGCGGCGGCGG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig10806:225..2199+ >mRNA_P-wetherbeei_contig10806.1.1 ID=mRNA_P-wetherbeei_contig10806.1.1|Name=mRNA_P-wetherbeei_contig10806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1974bp|location=Sequence derived from alignment at P-wetherbeei_contig10806:225..2199+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAATCGCAACCGAGCCGCTGGCGTTTCACCATGGCGCGCGGAAATTC
TCAGAATGCCGTCGGCAGCGCGGATTTCGGGGCGGCTGGCGGCGGCATGA
ACGGTGGCGGCGGCGACGGAGGCGGGCTGAGCAACACGACGCGGAGTTTC
GACGGGTACGACGGTGGCGTCAGCCCGGGCCCTGGCGGCGGCGACCACAG
CGGCCTGTTCGGCGTCGGCGGGATCGCCGACATTATCGGCGGCGGTGGCG
CCAGCAAGGCGCTGCTGTTCCCCGCGTCGAGCTGGGGCACCGACGGCAGC
TTCGAAGCGCTGTTGGACACGCGTGGGGCCGTCTTGGATCCGGACAACGA
CCCGCGCAGCCTGGCATCCGTCACGTCTGCCGCGGCGGTCCTGGCGGAGG
CGGAGGCCGTCGAGCCGGTAAACTTCACGCCGTCGGAGGTCGAATACTTC
CTGTGGCTCGGCCTGGAGGAGCCGGCAGAGGGCCGCTGGCACCCGGCGGC
GCTGCGCGTGCTCCGCGGTATGGTGCGGGCATCCGTGCCGGCGCTGCCGC
TGGAGGAACAGGAAGAGAATGGCGGCACTGGCGGCGACGGCGCTGCTGGC
GGCAGCGGAGACAACTGGGACCGCCGCGGCACGGACGGCAGCGCCACGAC
AGTGCCACGGGCCCGGGCTGGCAGCGACAGTGCGCTGCCGCGTCCGGGCG
CCGTCAACAACGCGGCGACGCCGCCGTCGCCGTCGCAGCACCGGCCGTCG
ACGCTGTCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCTGACCATCGCCGG
CACGCGGGTGGCAGAAGCGGTCGGGACGTTATTGGCGGCGGGCGGGCGGC
TGCCGCGGCTGCTCCTGTTGGAAGAGCTGCCGCGCACGGACGCCGAGGTG
GTGGGGCACGTGGAACTAGCGCGGCTAGTGGCGGCGGCGGCGTCGCCGGC
GGCGCCCGAGGCTGCGCGGGCGGCGGTGCGGGCAGCGGTACCGACGGCAC
GTGTCCTGGCGCTGCTGCGGAGGGCGGTGCCGCTGCAGCTGCAGGCGGCG
CTTCTCGAGCTGCTGCGCTGCCTGCTGGTGTTGTCGCCGCCGCCGCTACC
GTCGCCATCGCCGCTGCAGCATCGCGGCATGCAGTCGCCACTGCCGACGC
AGGCGTCGCAGGTCCCGTCAGTGGCGGGCTGGCAGCGTGGCGGCGGCGGC
GGTGGTGGTGGCGGCGGTGTCGGCGTGGGACGACCGGGTTCCGCTGCGGC
GCGACTCACCGCCAGCGGCGCCGCGTCGGCGGTCATGGCCTTGGCTCGCC
TCAGCACAAGCCCCAAGCCGTCTGCCGGCCCAACCTCGACGTCGGTCACC
GATACGCCGCGGTCGCCGATCACGGAGCCGCCCAGCATTGCCGGCGGCGG
TGGCAGTGTGCGGGTCGCCAACGGCGCCGGGAGCAGCAGCGCCAGCGGGC
ATGGCGTCAGCGCCCGAGGTGGCGCCATTCGCGAATGCATGTCAACCGAC
CTGGTGGACGCCGTGGCGGCCGCCGTGGCAGGGATGCGGCAGATGGCGAT
CCTCTGCTGGCTGGAGCAGCACCCGCACGCCGCGGTGGACGTCGACTGGC
AGCAGGAGCTGATGTCGCCACGGACGCCAGCGACACCTGCGGTGTCAGCA
GCGTCGCCGTTTGCCGCGGCTGCGGCGGCGCCACAACCGCCGTCAGAGGC
GGCGGCGGCGGTGTCGCGGGTGGCGGTGGGGCCGATTGCGGCGATGGCGT
CTGCAGTGGCAGCAGCGACGGCGGCGGCAGCATCTGCGGCGGCGGCAGTG
GTGGGAGACGACGCGCCACCCACACCGGCCTCGCCGGCCCCCGCTGCGAC
GCCGACGTCCGGCGGCGCCTGGGCGGGCGCCGGGGTGATCCGGCCGGGGG
AGGTGGTCGAAGTGCGTCGGCTCCTCATCTATGTGGAAGAAGGCGTCCTC
CCGCTGGCGCTGGCGGCGGCGGCG back to top
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