mRNA_P-wetherbeei_contig20693.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A5J6ME02_9PROT (Histidine kinase n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6ME02_9PROT) HSP 1 Score: 120 bits (301), Expect = 4.090e-26 Identity = 114/399 (28.57%), Postives = 179/399 (44.86%), Query Frame = 1
Query: 10 PLVATMLFAFAVLIGIWIVAYLNRAGDRDEIYRMAHAELLGSQSILAAQVGRTMESAQSLLESVDDWASEQTGVP-DLTDLGKLVTRLQRRHLIRLDIRLYDIRGNMVASAAYPDG-AINVADREYIKALEDMPPGSIHIGRQIIARDQGTRQIP----VAIRMRPNVLDVAYAATGISIAPLAEMFSSIFVTAPAIVGIVRDDGYVLFRSPDPEGFTDRRIDLDNIVPGGIRNPRRQSGLFATRIDPAGQQIVTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPWTLGFAIATSIGVLLFAGAVVRFLALREREAERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
P++A + FA + +G+ + D ++R A E ++ A VGR E + L + W G P D DL L L I + D G V + G A +V+ R + D P G++ + D +P +A++ R V+ AT S+ + ++ +S+ + + D ++ + ++ + ++ G A G ++ + +D Q L++ R + LA+ + A+ + + L G+ R L E + +R +L A AN AK FLAN+SHELRTPLNAIIGFSE + Q FGPI +RYRGYV D+L +GRHLL IV QLLD+A+IEA
Sbjct: 29 PILAAVSFASILAMGVLFAVTTHS----DTLHR-AENECQRMAAVAAVHVGRIAEESGRSLRVIAQWIERNPGAPLDSPDLIALADVLNIDPGQTRAIAVVDSTGQAVMLDSARAGLAFDVSARSFFPVARDGPEGTLLFAPPVRNLDTNELTVPALYKIAVQGRELVI-----ATAFSVGRVQDLMTSLLADYHGSLLLKSGDRVLVGAIENGSDEGTEKVASEALLGGPSAGAPSSPDQIACSRPVVGTSLLVEAR-LDRQALFL------RWDKIVLASSALMLVVLALVVFLSIEL--GSFYRRLRSSE---DSLRDSLAHANEANQAKTMFLANMSHELRTPLNAIIGFSELIERQAFGPISDRYRGYVTDILQSGRHLLSIVNQLLDMASIEA 405
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A5J6MTL8_9PROT (Histidine kinase n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MTL8_9PROT) HSP 1 Score: 115 bits (287), Expect = 2.870e-24 Identity = 124/413 (30.02%), Postives = 179/413 (43.34%), Query Frame = 1
Query: 10 PLVATMLFAFAVLIGIWIVAYLNRAGDRDEIYRMAHAELLGSQSILAAQVGRTMESAQSLLESVDDWASEQTGVP-DLTDLGKLVTRLQRRHLIRLDIRLYDIRGNMVASAAYPDGA---INVADREYIKALEDMPPGSIHIGRQIIARDQGTRQIPVAIRMRPNVLDVAYAATGISIAPLAEMFSSIFVTAPAIVGIVRDD--GYVLFRSPDPEGFTDRRIDLDNIVPGGIRNPRRQSGLFATRIDPAGQQI-------VTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPWTLGFAIATSIGVLLFAGAVVRFLALRERE--------AERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIE 1185
P++A LF ++L+ +VA + RD + R E ++ A V R E L V W P D DL L + I + D G V P G I+++ R Y D P ++ + G +P ++ ++ T S+ + ++ +V ++ ++ G +L R+ D ++ IR Q+ A GQ + +T + + G L V D A LA W G +A S G+LL VV FL+L R E +R +L +A AN AK FLAN+SHELRTPLNAIIGFSE + Q FGP+ E+YR YVGD+L +GRHLL IV QLLD+A+IE
Sbjct: 28 PVLAATLFV-SILVLAAVVAIITY---RDTL-RHTENECQRVVAVAAEHVARIAEETDRSLRVVAQWIERNPDAPLDAPDLVALAEIMTLDPGQTRAIAVIDSTGQAVRLE--PGGTARPIDMSKRPYFALGRDGPERTVLFAPPWRSSSTGELTVPALYKLAVERRELII-VTAFSVGRVGDL----------MVSLLSEEVHGRLLLRNGD------------TVLVAAIRAGPDQAAERAAADAMLGQPVPAPAPSEITCNRTIAGTGLAVEAHL---DRTAMLAG---WYRG--VAASAGLLLLVLLVVLFLSLELRSFYRRLRTSEESLRESLARANEANQAKTMFLANMSHELRTPLNAIIGFSELIERQAFGPVSEKYRIYVGDILQSGRHLLSIVNQLLDMASIE 402
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: S9SBL0_MAGFU (Histidine kinase n=1 Tax=Magnetospirillum fulvum MGU-K5 TaxID=1316936 RepID=S9SBL0_MAGFU) HSP 1 Score: 110 bits (275), Expect = 1.090e-22 Identity = 114/394 (28.93%), Postives = 174/394 (44.16%), Query Frame = 1
Query: 55 IWIVAYLNRAGDRDEIYRMAHAELLGSQSILAAQVGRTMESAQSL-LESVDDWASEQTGVPDLTDLGKLVTRLQRRHLIRLDIRLYDIRGNMVASAAYPDGAIN--VADREYIKALEDMPPGSIHIGRQIIARDQGTRQIPVAIRMRPNVLDVAYAATGISIAPLAEMFSSIFVTAPAIVGIVRDDGYVLFRSPDPEGFTDRRIDLDNIVPGGIRNPRRQS---GLFATRIDPAGQQIVTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPW------TLGFAIATSIGVLLFAGAVVRFLALREREA----ERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
+W+ L DR R AHAEL G S+ AA+ + S L L S++ +S P L +T L + L + D +G + A P ++ V DR ++ + G + + + +R G +P+ R+ VA GI IA L + +I + ++RDDG VL RSP P RI + P RN Q G F G + + ++K + +P + S + + A PW L S+ + + A ++R LA + EA RV+ + + +FLA VSHELR+PLNAI+GFSE + + GPI Y+ D+ +G+HLL +V LLD AAI+A
Sbjct: 22 VWLGGALWLWNDRAATVREAHAEL-GRMSLSAAEHAHRLLSLSDLFLASIEPISSRPQASPGDPTLIARLTALLSQDTALLGLATVDHQGMLTTIAPSPQQKVSAFVGDRAFVTEAQ---VGRLVVAPPVKSRLSGRWVLPLTRRIADPKSPVALLMAGIDIAALERHYDTIRHDVGGAITLLRDDGTVLIRSPSPPDS--ERIRNLSEAPL-FRNANTQGVDEGQFDGMSPFDGVERLGSYKRI--RPFNIGVSVSL----TRAAVLEPWWRRVWLVLTGTTLISLAIAIAATLILRHLASLQAEALTLENRVQDRTRALQQLLDRREQFLAGVSHELRSPLNAILGFSEALQMGIRGPIPPAQAEYLSDIHRSGQHLLALVNDLLDNAAIDA 402
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A6J4F570_9PROT (Histidine kinase n=1 Tax=Magnetospirillum sp. SS-4 TaxID=2681465 RepID=A0A6J4F570_9PROT) HSP 1 Score: 110 bits (275), Expect = 1.110e-22 Identity = 112/412 (27.18%), Postives = 192/412 (46.60%), Query Frame = 1
Query: 4 SSPLVATMLFAFAVLIGIWIVAYLNRAG----DRDEIYRMAHAELLGSQSILAAQVGRTMESAQSLLESVDDWA-----SEQTGVPDLTDLGKLVTRLQRRHLIRLDIRLYDIRGNM--VASAAYPDGAINVADREYIKALEDMPPGSIHIGRQIIARDQGTRQIPVAIRMRPNVLDVAYAATGISIAPLAEMFSSIFVTAPAIVG---IVRDDGYVLFRSPDPEGFTDRRI-DLDNIVPGGIRNPRRQSGLFATRIDPAGQQIVTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPWTLGFAIATSIGVLLFAGAVVRFLALREREAERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIH---ERYRGYVGDVLSAGRHLLGIVAQLLDLAAIE 1185
S + + L AF+ L I + L A +R+E R+A + + +LA+ + +L V + +E+ P + L L ++ ++R I + + G+ + + P ++++DR+Y++ D + IG + +R+ G+ I VA R R D ++A ++ LA++ + + + P +V +G +L RSPD + F R I DL + RN + G + +D G+ + + P+ S V ++ + A ++ +L ++R L +R + A A+ AN AK FLAN+SHELRTPLNAI+GFS+ AL T P H ER Y+G V ++GRHLLG++ +LDL+ IE
Sbjct: 17 GSAAIRSRLIAFSAL--IITILLLGTAAWIKTERNEALRVAAGVVSNTSRLLASVTDSNFGAIDKMLAGVAEVVVARPVTERDSRPAV--LAFLNRQVAEAGIVR-SILVIGVDGHTRYATNLSDPYQKVDLSDRDYVRHHTDRSDAGLFIGAPVRSRNDGS-WIMVASR-RVTASDGSFAGVAAAVVSLADLAAMVAIATPNPTDSALLVDGNGIILTRSPDHDRFVGRSIADLPSFQ--AARNVQSHGGSIVSPLD--GRMRLFSANRGGSSPVMAVVSRDVDEILTDWRFQAATLASAAAVVTLVILALTRGLLRQLVRVDRTVAELAAARIAADGANQAKSAFLANMSHELRTPLNAILGFSD--ALLTGFPDHSCRERCHDYLGHVQTSGRHLLGLINDILDLSKIE 415
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: UPI001B0E73E3 (Two-component sensor histidine kinase n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B0E73E3) HSP 1 Score: 107 bits (267), Expect = 1.140e-21 Identity = 108/388 (27.84%), Postives = 178/388 (45.88%), Query Frame = 1
Query: 91 RDEIYRMAHAELLGSQSILAAQVGRTMESAQSLLESVDDWASEQ--TGVPDLTDLGKLVTRLQRRHLIRLDIR----------LYDIRGNMVA-SAAYPDGAINVADREYIKALEDMPPGSIHIGRQIIARDQGTRQIPVAIRMRPNVLDVAY---AATGISIAPLAEMFSSIFVTAPAIVGIVRDDGYVLFRSPDPEGFTDRRIDLDNIVPGGIRNPRRQSGLFATRIDPAGQQI--VTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPWTLGFAIATSIGVLLF----AGAVVRFLALREREAERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
R+ + + E +LA Q +T+ +A+ L+ ASE+ PD + V + + H + D++ L G +++ S +P I V DR+Y A+ D P I + R GT +A R+R D A+ A I A + ++ I + + + R+DG +L R P E R G + +++G R+ + +I + A + + +PL + + D ++ RT G ATS+ + L G V+R + R+ +A + A QAE AN AK EFLA +SHELRTPL A++GF++ + + R R + ++ +AGRHLLG++ +LDLA IEA
Sbjct: 15 REAVLAQSAEEATHLGLVLAEQTRQTIRAAELTLKL----ASERLDASAPDFEE----VAQSRATHAVLADLQAGLPQLSALSLVSASGEVLSFSRRWPTPLIRVDDRDYFIAMRDDPKLLRFISAPVQNRGSGTWTFYIAHRLRRA--DGAFGGVALAAIECAFFEQFYADIGLPNGGTLALFRNDGTLLSRWPHAEDLIGRSF----ATARGFTDIVQKTGSGTIRLTSSIDRIDRIIAMQTLKNEPLVISVTLE-EDQALRIWRRTATIWG---ATSVAIALIICGLTGLVLRQMRRRQAQALELAAAKRQAEAANTAKSEFLAAMSHELRTPLTAVLGFADLLR-EDGNEYTSRRREFAENIQTAGRHLLGLIGDVLDLAKIEA 383
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A178M5R3_9PROT (Histidine kinase n=2 Tax=Magnetospirillum marisnigri TaxID=1285242 RepID=A0A178M5R3_9PROT) HSP 1 Score: 107 bits (267), Expect = 1.770e-21 Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 919 ALREREAERVRT------ALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHE-RYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
AL+ AE VR A+EQAE AN AK +FLANVSHELRTPLNAIIGFSE +A + FGP+ E RY+GYV DVLS+GRHLL ++ +LD+A IEA
Sbjct: 587 ALKAEIAEHVRAKRELTVAMEQAEIANRAKTDFLANVSHELRTPLNAIIGFSEVMASEMFGPLGEPRYKGYVQDVLSSGRHLLEVINDILDIARIEA 683
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A1H6HEI1_MAGFU (Histidine kinase n=2 Tax=Magnetospirillum fulvum TaxID=1082 RepID=A0A1H6HEI1_MAGFU) HSP 1 Score: 106 bits (264), Expect = 3.060e-21 Identity = 108/397 (27.20%), Postives = 170/397 (42.82%), Query Frame = 1
Query: 16 VATMLFAFAVLIGIWIVAYLNRAGDRDEIYRMAHAELLGSQSILAAQVGRTMESAQSLLESVDDWASEQTGVPDLTDLGKLVTRLQRRHLIRLDIRLYDIRGNMV-ASAAYPDGAINVADREYIKALEDMPPGSIHIGRQIIARDQGTRQIPVAIRMRPNVLDVAYAATGISIAPLAEMFSSIFVTAPAIVGIVRDDGYVLFRSPDPEGFTDRRIDLDNIVPGGIRNPRRQSGLFATRIDPAGQQIVTAFKAVDGQPLYVYGSFRVRDLEAKLAARTPW-TLGFAIATSIGVLLFAGAVVRFLALREREAERVRTALEQAETANAA----KREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
VAT L A + +W+ L DR R+AH EL A R + L S++ A+ P DL + L + L + + D +G + + + + V DR ++ G I + + +R G +P+ ++ + VA I +A L + +I + + ++RDDG VL RSP P R D + G F G + +FK + + V S RD + R W L A+ S+ + + A ++R LA EA + +E A +++FLA VSHELR+PLNAI+GFS+ + L GP+ Y+ D+ +G+HLL +V LLD AAI+A
Sbjct: 3 VATSLAAVTL---VWLGGALWLWNDRAATVRVAHEELARMSLSAAEHAHRLLSLCDLFLASIEPIATRTEPEPGDLDLIARLNTLVGQDTALLGLAMVDHQGMLNNIDPSRSNKPVFVGDRAFVTEAR---VGRIIVAPPVKSRISGRWVLPLVRQVADSQSPVAVLMAAIDVAALERHYDTIRHSVGGAITLMRDDGTVLIRSPSPPDSERVRTLTDAPLFSNANAQGVDEGQFDGLSPFDGIDRLGSFKRIRSFNIGVSVSL-TRDAVLEPWWRRVWLVLTGAVLISLAIAIAATLILRHLASLRAEAVTLENRVEDRTRALKQLLDRRQQFLAGVSHELRSPLNAILGFSDALLLGIRGPVPPEQTEYLKDIHRSGQHLLSLVNDLLDSAAIDA 392
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: Q2W9V4_MAGSA (Histidine kinase n=2 Tax=Magnetospirillum magneticum TaxID=84159 RepID=Q2W9V4_MAGSA) HSP 1 Score: 106 bits (264), Expect = 4.000e-21 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 904 VVRFLALREREAERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
V ++ R+R + +R A EQAE+A+ AK +FLA +SHELRTPLNAIIGF+E + Q GP+ ERYR Y GD+ ++GRHLLGI+ +LDLA IEA
Sbjct: 492 VAEDISWRKRAEDELRAAKEQAESASRAKSDFLAGMSHELRTPLNAIIGFAETMYSQVLGPMPERYREYAGDISASGRHLLGIITDILDLAKIEA 586
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A2D8HEB3_9PROT (Histidine kinase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HEB3_9PROT) HSP 1 Score: 100 bits (249), Expect = 1.640e-20 Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 880 GVLLFAGAVVRFLALREREAERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPI-HERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
G LL+ + + R R +R A E AE AN AK EFLAN+SHELRTPLNAIIGFSE ++ + FG + H Y+ YVGD+ AGRHLLG++ LLD+A +EA
Sbjct: 6 GRLLYFEGTLTDMNDRVRAEVTLRKAKEMAELANRAKSEFLANMSHELRTPLNAIIGFSELLSSEAFGKLGHPNYKEYVGDIHGAGRHLLGLINDLLDVAKVEA 109
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Match: A0A4Y9RX56_9CAUL (Histidine kinase n=3 Tax=Caulobacteraceae TaxID=76892 RepID=A0A4Y9RX56_9CAUL) HSP 1 Score: 104 bits (259), Expect = 1.800e-20 Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 937 AERVRTALEQAETANAAKREFLANVSHELRTPLNAIIGFSEFVALQTFGPIHERYRGYVGDVLSAGRHLLGIVAQLLDLAAIEA 1188
A + A+ +AE AN AK EFLAN+SHELRTPLNAI GFSE +A + FGP++E+Y+GY GD+L +G+HLL ++ +LD+A IEA
Sbjct: 534 ARKYEVAMTRAEAANQAKSEFLANMSHELRTPLNAINGFSEIMASELFGPLNEKYKGYAGDILKSGQHLLSLINDVLDMAKIEA 617 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20693.1.1 >prot_P-wetherbeei_contig20693.1.1 ID=prot_P-wetherbeei_contig20693.1.1|Name=mRNA_P-wetherbeei_contig20693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp MLFAFAVLIGIWIVAYLNRAGDRDEIYRMAHAELLGSQSILAAQVGRTMEback to top mRNA from alignment at P-wetherbeei_contig20693:4..1191+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20693.1.1 ID=mRNA_P-wetherbeei_contig20693.1.1|Name=mRNA_P-wetherbeei_contig20693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig20693:4..1191+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20693:4..1191+ >mRNA_P-wetherbeei_contig20693.1.1 ID=mRNA_P-wetherbeei_contig20693.1.1|Name=mRNA_P-wetherbeei_contig20693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig20693:4..1191+ (Phaeothamnion wetherbeei SAG_119_79)back to top |