mRNA_P-wetherbeei_contig20680.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20680.1.1
Unique NamemRNA_P-wetherbeei_contig20680.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A1M6PTZ0_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Roseomonas rosea TaxID=198092 RepID=A0A1M6PTZ0_9PROT)

HSP 1 Score: 317 bits (812), Expect = 1.460e-104
Identity = 166/299 (55.52%), Postives = 212/299 (70.90%), Query Frame = 1
Query:   37 TTAAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQV-RGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQNVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            T  A AQ  +P+R ++I+NPY  GG TD+L RALA GLS+RLGQ  VV N+ GA G +GTA  +R+  DG+ LLFAPALVLSVLPQ  RG    Y+PD+L P+CQTF+N M + V PDSP++++ADLV AARARPG LN+G  G ++IPHLA  E    A +D+  +PFRGD AV+T++ GGR+D   +V+G VAG+++R++ +FAE RH S PDVPT +EQGFDV+PTSFGGL APA TP   L  L  ACE AA+DE Y   A  A QP  YYA +A F  R+ RD   KAA+L  +
Sbjct:   15 TRLAMAQDTFPSRPIQILNPYTPGGATDVLARALAPGLSARLGQPVVVTNRDGAAGAIGTAAVSRAAADGHGLLFAPALVLSVLPQAQRGVE--YRPDSLVPVCQTFDNVMVIAVRPDSPLRSLADLVAAARARPGGLNFGTLGVASIPHLAAVELSQAAGLDMVHVPFRGDAAVLTELSGGRLDFATLVLGSVAGRDLRVLAVFAEARHPSMPDVPTAREQGFDVAPTSFGGLFAPAGTPPARLVALEGACEAAARDETYRNVALSAYQPPGYYAGSAAFGARIARDVASKAALLRTL 311          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: UPI001ADEEC10 (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001ADEEC10)

HSP 1 Score: 316 bits (809), Expect = 4.170e-104
Identity = 171/296 (57.77%), Postives = 207/296 (69.93%), Query Frame = 1
Query:   43 AAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQNVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            AA AQ+  P+R V IVNPY AG TTD L RALA G++ RLGQ  VV N+ GA GG+GTA  AR+ PDG  LLFAPA+VLSVLP  RG + GY PDAL P+CQ FENAM + V PDSP   +ADLV AARARPGAL+YGHQG ++IPHLA  E    AR+ ++D+P+RG+ AV+ D+  GR+D    VMG ++GQ +R++G+FA  RH   PDVPTV EQGFDV+PTSFGGL APA TPAP  + L +AC  AA++E Y   A R  QPA   ADA T   RL RD   K  +L  I
Sbjct:   18 AALAQAWAPDRPVTIVNPYAAGSTTDALARALAAGMAPRLGQPVVVANRDGAAGGIGTAQVARAAPDGLTLLFAPAVVLSVLP-ARG-DPGYAPDALVPVCQAFENAMAIAVRPDSPFATLADLVAAARARPGALSYGHQGVASIPHLAALELAEAARLQLQDVPYRGEPAVLVDLRAGRVDFAVTVMGSLSGQGLRVLGVFAPARHPMLPDVPTVAEQGFDVAPTSFGGLFAPAGTPAPARAALEAACLAAAREEGYRSVAARMFQPATPEADAGTLAARLARDIADKRRLLATI 311          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: UPI00200B669C (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200B669C)

HSP 1 Score: 313 bits (802), Expect = 7.130e-103
Identity = 165/297 (55.56%), Postives = 215/297 (72.39%), Query Frame = 1
Query:   43 AAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQN-VRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            AA   SD+P   +++VNPYPAGG TD++ RALA GLS RLGQ  +V N+ GA G VGT G AR+ PDGY L F PALVLSVLP V   N+G +P+ L P+CQ F NA  + V PDSP++ +ADLV AA+A PGAL+YG  G ++IPHLAME++   A I+   +P+RGDGAV+TDVL GR+D GA+V+G  +G++ +R++ +F   R+ +FPDVPT  EQG+DV+PTSFGGLLAPAATP   L++L +AC   A DE+Y  AA+RA QPA+Y+  A  F  RL RD  +KAA+L  I
Sbjct:   31 AAETYSDHP---IQMVNPYPAGGATDLMARALAAGLSQRLGQPVLVLNRDGAAGAVGTLGVARAAPDGYTLAFVPALVLSVLP-VTQPNSGLRPEMLRPVCQLFSNAQAIAVRPDSPLRGLADLVAAAKAAPGALSYGTLGIASIPHLAMEQWTRAAGIEATHVPYRGDGAVLTDVLAGRLDFGAIVLGSASGRDDIRLLAVFDNARNLAFPDVPTAIEQGYDVAPTSFGGLLAPAATPPDRLARLEAACAEVAADELYRAAARRALQPADYHTGAEAFAGRLARDVAQKAALLRAI 323          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A502GCT2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas nepalensis TaxID=1854500 RepID=A0A502GCT2_9PROT)

HSP 1 Score: 303 bits (776), Expect = 4.160e-99
Identity = 163/306 (53.27%), Postives = 214/306 (69.93%), Query Frame = 1
Query:   16 LAAVAAITTAAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQ-NVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            LAA+ A    A AQ  +P+R +++VNPYPAGG TD++ RALA GL +RLGQ  VV N+ GA G VGT G AR+  DGY L F PALVLSVLP V   N+G +PD+L P+CQ F NA  + V  DSP++ +ADLV AARA PGA+ YG  G ++IPHLA+ ++   ARI++  +P+RGDGAV+TD L GRID  A+V+G  +G+ ++R++ +F   R+ +FP+VPT  EQGFDV+PTSFGGL+APA TPA  ++ L +AC   A +E Y  AA+RA QP  Y+A AA F  RL RD   KA +L  I
Sbjct:    7 LAAMLAAPHLACAQEAFPSRPLQVVNPYPAGGATDLMARALAAGLQARLGQPVVVVNRDGAAGAVGTLGVARAAADGYTLAFVPALVLSVLP-VTQPNSGLRPDSLRPVCQMFANAQAIAVRADSPLRGLADLVAAARAAPGAVTYGSLGIASIPHLAILQWARAARIEMTHVPYRGDGAVMTDALAGRIDFAAIVLGSASGRTDMRLLAVFDTARNPAFPEVPTAAEQGFDVAPTSFGGLMAPAGTPAERVALLEAACAAVAAEEGYRAAARRALQPDAYHAGAAAFAARLARDVAEKAELLRAI 311          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: UPI0018DFEDAC (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI0018DFEDAC)

HSP 1 Score: 303 bits (776), Expect = 4.590e-99
Identity = 156/300 (52.00%), Postives = 212/300 (70.67%), Query Frame = 1
Query:   46 AHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQN-VRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERIKATP 942
            A AQ  YP R ++++NPYPAGG TD++ RALA GLS RLGQ  VV N+ GA G VGT   AR+ PDGY L F PALVLSVLP V   N+G +P+AL P+CQ F NA  + V  DSP++++ DLV AA+A PGA+ YG  G ++IPHLA+ ++   A I++  +P+RGDGAV+TD L GRID  A+V+G  +G++ +R++ +F   R+ +FPDVPT  EQG+DV+PTSFGGL+APA TP   ++ L +AC   A +E+Y  AA+RA QPA Y++ A+ F +RL RD   KA +L+ I  +P
Sbjct:   20 AEAQESYPARPIQVINPYPAGGATDLMARALAAGLSERLGQPVVVVNRDGAAGSVGTLSVARAAPDGYTLAFVPALVLSVLP-VTQPNSGLRPNALRPVCQMFANAQAIAVRADSPLRSLTDLVAAAKATPGAVTYGSLGIASIPHLAILQWARVAGIEMTHVPYRGDGAVLTDALAGRIDFAAIVLGSASGRSDMRLLAVFDTARNPAFPDVPTAMEQGYDVAPTSFGGLMAPAGTPPERVAVLEAACAAVAPEELYRAAARRALQPAAYHSGASAFAERLARDVAEKAELLKGIDLSP 318          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: UPI001BAB96B2 (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BAB96B2)

HSP 1 Score: 302 bits (773), Expect = 1.260e-98
Identity = 158/300 (52.67%), Postives = 211/300 (70.33%), Query Frame = 1
Query:   46 AHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQ-NVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERIKATP 942
            A AQ  YP+R ++++NPYPAGG+TD++ RA+A GL  RLGQ  VV N+ GA G VGTA  ARS PDGY L F PALVLSVLP V   N+G + ++L P+CQ F NA  L V  DSP++++ADLV AARA PG++ YG  G ++IPHLA+ ++   A +D+  +P+RGD AV+TDVLGGR+D+  +V+G  +G+ ++R++ +F   R+ +FP+VPT  EQGFDV+PTSFGGL+APAATP   L+ L  AC   A DEVY  AA+RA QP  YY  A  F +RL RD   K+ +L  I  +P
Sbjct:   19 ARAQEAYPSRPIQVINPYPAGGSTDLMARAMATGLQQRLGQPVVVVNRDGAAGAVGTAAVARSAPDGYTLAFVPALVLSVLP-VTQPNSGVQSNSLRPVCQMFANAQALAVRRDSPLRSLADLVAAARAAPGSITYGSLGIASIPHLAILQWARAAGVDMTHVPYRGDVAVMTDVLGGRLDLATIVLGSASGRTDMRLLAVFDTARNPAFPEVPTAMEQGFDVAPTSFGGLMAPAATPPERLAVLEEACAVVAVDEVYRAAARRALQPEAYYTGADAFARRLARDVAEKSELLRGIDLSP 317          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A0S3PUR5_9BRAD (Tripartite tricarboxylate transporter family receptor n=2 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PUR5_9BRAD)

HSP 1 Score: 300 bits (768), Expect = 7.710e-98
Identity = 160/308 (51.95%), Postives = 211/308 (68.51%), Query Frame = 1
Query:   10 AMLAAVAAITTAAHAQSD-YPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQNVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            A++ A+ A   + HA +  +P+R V+IVNP   G TTDIL RALA  LS+RLGQ F V N+ G GG +GTA  A + PDGY L F    VL+VLP +R     Y  D+L PICQT  NAM L V  DSP + V DLV AAR+ PG + YGHQG  TIP+LAMEEFL  +++ I+    R +G  ++++L G +DV  VV G V G++VRI+GIF E RH  FP+VPT++EQGF+V+P S GGL+APAATP  V+++LA+ACE AAKD +Y  AA++  QP +Y+A+ ATFR RL RD + K  +L R+
Sbjct:    8 AIVVALWAALASQHANAQPFPSRPVQIVNPSVPGSTTDILARALAAALSARLGQPFQVVNRAGGGGSLGTASVAHAMPDGYTLFFGATYVLTVLPAMRAVEAAYTSDSLTPICQTVSNAMVLAVRADSPFQTVNDLVEAARSAPGTIKYGHQGIGTIPNLAMEEFLDVSKLKIEAAASRSEGGALSELLAGTVDVAVVVQGTVVGRDVRILGIFTEERHPRFPEVPTIREQGFEVAPVSIGGLMAPAATPREVVTRLAAACEQAAKDPIYVEAARQVGQPDSYFANIATFRHRLNRDIDIKKKLLGRM 315          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A1I4ETQ7_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=Acetobacteraceae TaxID=433 RepID=A0A1I4ETQ7_9PROT)

HSP 1 Score: 292 bits (747), Expect = 1.090e-94
Identity = 155/305 (50.82%), Postives = 207/305 (67.87%), Query Frame = 1
Query:   19 AAVAAITTAAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQN-VRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERI 930
            AA  A+   A AQ  YP+R V+IV PYP G   D+L RALA  +   LGQ  VV N+ GA G VG+A  ARST DGY LLF PALV SVLP ++ A +G + ++  PICQ F N+M LVV PDSP + + D+  AARARP  + YG  G ++IPHLAM ++   A +D++ +PFR D +VIT+VL GR+D+G++V+G  AG+N VRI+ +F   RH  FPD  T  EQGFDV+P SFGGL AP  TP   ++++ +AC  AA+ E Y  AA+ A+QPAN++ +AA F +RLQ+D E+KA +L  I
Sbjct:   11 AAALALPAVARAQEAYPSRPVQIVIPYPPGNAIDLLVRALAAAMQPHLGQSAVVLNRDGAAGAVGSASVARSTADGYTLLFVPALVASVLPVIQ-AQSGLQRNSFRPICQVFSNSMALVVRPDSPFRTLRDVQAAARARPSQITYGTLGVTSIPHLAMVQWAQAASVDVEHVPFRADASVITEVLAGRLDIGSIVLGSAAGRNDVRILAVFDAQRHPDFPDAATAMEQGFDVAPASFGGLFAPTGTPDERIARIEAACAAAAQTESYRSAARNASQPANFFLNAADFNRRLQQDIEQKAVLLRGI 314          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A840AK29_9PROT (Tripartite-type tricarboxylate transporter receptor subunit TctC n=3 Tax=Roseococcus TaxID=35812 RepID=A0A840AK29_9PROT)

HSP 1 Score: 290 bits (742), Expect = 6.630e-94
Identity = 158/290 (54.48%), Postives = 194/290 (66.90%), Query Frame = 1
Query:   67 PNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQNVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERIKA 936
            P R V IVNPY AG TTD L R LA G+++RL Q  VV+N+ GA GG+GTA   R+ PDG+ LLFAPA+VLSVLP  RG + GY P+AL PICQTFENAM + V P+SP   +ADLV AARARPGA+ +GHQG ++IPHLA  E    A +  +D+P+RG+ AV+TD+  GR+D    VMG +AGQN+R++G+FA  RH   P+VPTV E GF V+PTSFGGL APA TP      L +AC  AA+DE Y   A R  QP    A A     RL RD   K  +L  I A
Sbjct:   30 PERPVTIVNPYAAGSTTDTLARTLAQGMTARLAQPVVVQNRDGAAGGIGTAFVTRAAPDGHTLLFAPAVVLSVLP-ARG-DPGYGPEALVPICQTFENAMAIAVRPESPFATLADLVAAARARPGAVTFGHQGIASIPHLAALELAEAAGLQFQDVPYRGEPAVLTDLRAGRVDFAVTVMGSLAGQNMRVLGVFAPARHPLMPEVPTVAELGFPVAPTSFGGLFAPAGTPQAARVALEAACLAAARDEAYRAVAARVFQPETPEAPADALAARLARDIADKRRLLTAIGA 317          
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Match: A0A6M1LSJ2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Falsiroseomonas algicola TaxID=2716930 RepID=A0A6M1LSJ2_9PROT)

HSP 1 Score: 289 bits (740), Expect = 1.170e-93
Identity = 159/309 (51.46%), Postives = 208/309 (67.31%), Query Frame = 1
Query:   10 AMLAAVAAITTAAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRLGQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANTGYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQGPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGIVAGQN-VRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAPVLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKAAVLERIK 933
            A+LA +AA  TA   Q  +P R ++IVNPYPAGG TD++ RALA GLS+R GQ  VV N+ GA G +GTA  ARS PDGY L F PALVL+VLP V   N+G + D+L P+CQ F NA  + V  DSP + + DLV AAR  PG + YG  G ++IPHLAM ++   A +D+  IP+RGDGAV+T+VL GR+D GA+V+G  +G++ +R++ +F   R+ +FPDVPT  E GFDV+PTSFGGL+APAATP   ++ L +AC   A  E Y  AA+RA QP  ++  A  F  RLQ D   KA  L  I+
Sbjct:    9 ALLALLAAPATA---QEAFPARGMQIVNPYPAGGATDLMARALAAGLSTRFGQPVVVVNRDGAAGAIGTAAVARSAPDGYTLAFVPALVLTVLP-VTQPNSGLRTDSLRPVCQMFSNAQAIAVRADSPWRTLGDLVAAARTAPGRVTYGSLGVASIPHLAMLQWTAAAGLDLAHIPYRGDGAVLTEVLAGRLDAGAIVLGSASGRSDIRLLAVFDTARNPAFPDVPTAIEAGFDVAPTSFGGLMAPAATPEDRIAVLEAACAEVAATEGYRAAARRALQPEAFHTGAGAFAARLQSDATMKAEQLRSIR 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20680.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M6PTZ0_9PROT1.460e-10455.52Tripartite-type tricarboxylate transporter, recept... [more]
UPI001ADEEC104.170e-10457.77tripartite tricarboxylate transporter substrate bi... [more]
UPI00200B669C7.130e-10355.56tripartite tricarboxylate transporter substrate bi... [more]
A0A502GCT2_9PROT4.160e-9953.27Tripartite tricarboxylate transporter substrate bi... [more]
UPI0018DFEDAC4.590e-9952.00tripartite tricarboxylate transporter substrate bi... [more]
UPI001BAB96B21.260e-9852.67tripartite tricarboxylate transporter substrate bi... [more]
A0A0S3PUR5_9BRAD7.710e-9851.95Tripartite tricarboxylate transporter family recep... [more]
A0A1I4ETQ7_9PROT1.090e-9450.82Tripartite-type tricarboxylate transporter, recept... [more]
A0A840AK29_9PROT6.630e-9454.48Tripartite-type tricarboxylate transporter recepto... [more]
A0A6M1LSJ2_9PROT1.170e-9351.46Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20680contigP-wetherbeei_contig20680:236..1180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123060.JONP01000010_gene2284
PFAMsTctC
Model size945
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.14e-100
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1RDH7@1224|Proteobacteria
DescriptionTripartite tricarboxylate transporter family receptor
Cds size933
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186206.2135615-CDS-P-wetherbeei_contig20680:235..11681683186206.2135615-CDS-P-wetherbeei_contig20680:235..1168Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20680 236..1168 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186206.222075-UTR-P-wetherbeei_contig20680:1168..11801683186206.222075-UTR-P-wetherbeei_contig20680:1168..1180Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20680 1169..1180 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20680.1.1prot_P-wetherbeei_contig20680.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20680 236..1168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20680.1.1

>prot_P-wetherbeei_contig20680.1.1 ID=prot_P-wetherbeei_contig20680.1.1|Name=mRNA_P-wetherbeei_contig20680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp
MLAAVAAITTAAHAQSDYPNRVVKIVNPYPAGGTTDILTRALAVGLSSRL
GQQFVVENKPGAGGGVGTAGTARSTPDGYELLFAPALVLSVLPQVRGANT
GYKPDALAPICQTFENAMGLVVNPDSPIKNVADLVTAARARPGALNYGHQ
GPSTIPHLAMEEFLLNARIDIKDIPFRGDGAVITDVLGGRIDVGAVVMGI
VAGQNVRIIGIFAETRHSSFPDVPTVKEQGFDVSPTSFGGLLAPAATPAP
VLSKLASACEGAAKDEVYAIAAKRAAQPANYYADAATFRQRLQRDTERKA
AVLERIKATP*
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mRNA from alignment at P-wetherbeei_contig20680:236..1180-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20680.1.1 ID=mRNA_P-wetherbeei_contig20680.1.1|Name=mRNA_P-wetherbeei_contig20680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig20680:236..1180- (Phaeothamnion wetherbeei SAG_119_79)
AAAGCGGCCGCCATGCTGGCCGCGGTCGCAGCGATCACGACGGCAGCCCA CGCGCAGAGCGACTATCCCAATCGCGTCGTCAAGATCGTCAATCCTTACC CGGCCGGCGGCACCACCGATATCCTGACGCGCGCGCTCGCCGTCGGACTC TCGAGCCGGCTCGGCCAGCAGTTCGTCGTGGAGAACAAGCCGGGCGCCGG TGGCGGCGTCGGCACCGCGGGAACGGCACGTTCGACTCCGGATGGATACG AGCTTCTGTTTGCGCCCGCGCTGGTGCTGTCTGTGCTGCCGCAGGTGCGC GGCGCCAACACCGGCTACAAGCCGGACGCACTCGCGCCGATCTGCCAGAC ATTCGAGAATGCGATGGGGCTGGTGGTCAATCCGGATTCCCCGATCAAGA ATGTCGCCGACCTGGTGACGGCCGCGCGGGCCCGTCCCGGCGCACTGAAC TACGGCCACCAGGGTCCCTCGACGATCCCGCATCTGGCGATGGAAGAGTT CCTGCTGAACGCCAGGATCGACATCAAGGACATTCCGTTCCGCGGCGACG GCGCCGTCATTACAGACGTGCTGGGTGGACGCATCGACGTGGGCGCTGTC GTGATGGGGATCGTCGCCGGCCAGAATGTCCGCATCATCGGCATCTTCGC GGAGACGCGGCACTCGTCGTTCCCCGATGTGCCGACAGTGAAAGAGCAAG GCTTCGACGTCAGCCCGACAAGCTTCGGCGGATTGCTGGCGCCGGCTGCC ACGCCCGCTCCGGTCCTGTCCAAGCTCGCCAGTGCCTGCGAAGGCGCCGC CAAGGATGAGGTCTATGCCATCGCGGCAAAGCGGGCGGCGCAGCCGGCGA ACTACTACGCCGACGCCGCAACGTTCCGGCAACGCCTGCAGCGCGATACC GAGCGCAAGGCCGCGGTGCTGGAGCGGATCAAGGCCACGCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20680:236..1180-

>mRNA_P-wetherbeei_contig20680.1.1 ID=mRNA_P-wetherbeei_contig20680.1.1|Name=mRNA_P-wetherbeei_contig20680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig20680:236..1180- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGCCGCGGTCGCAGCGATCACGACGGCAGCCCACGCGCAGAGCGA
CTATCCCAATCGCGTCGTCAAGATCGTCAATCCTTACCCGGCCGGCGGCA
CCACCGATATCCTGACGCGCGCGCTCGCCGTCGGACTCTCGAGCCGGCTC
GGCCAGCAGTTCGTCGTGGAGAACAAGCCGGGCGCCGGTGGCGGCGTCGG
CACCGCGGGAACGGCACGTTCGACTCCGGATGGATACGAGCTTCTGTTTG
CGCCCGCGCTGGTGCTGTCTGTGCTGCCGCAGGTGCGCGGCGCCAACACC
GGCTACAAGCCGGACGCACTCGCGCCGATCTGCCAGACATTCGAGAATGC
GATGGGGCTGGTGGTCAATCCGGATTCCCCGATCAAGAATGTCGCCGACC
TGGTGACGGCCGCGCGGGCCCGTCCCGGCGCACTGAACTACGGCCACCAG
GGTCCCTCGACGATCCCGCATCTGGCGATGGAAGAGTTCCTGCTGAACGC
CAGGATCGACATCAAGGACATTCCGTTCCGCGGCGACGGCGCCGTCATTA
CAGACGTGCTGGGTGGACGCATCGACGTGGGCGCTGTCGTGATGGGGATC
GTCGCCGGCCAGAATGTCCGCATCATCGGCATCTTCGCGGAGACGCGGCA
CTCGTCGTTCCCCGATGTGCCGACAGTGAAAGAGCAAGGCTTCGACGTCA
GCCCGACAAGCTTCGGCGGATTGCTGGCGCCGGCTGCCACGCCCGCTCCG
GTCCTGTCCAAGCTCGCCAGTGCCTGCGAAGGCGCCGCCAAGGATGAGGT
CTATGCCATCGCGGCAAAGCGGGCGGCGCAGCCGGCGAACTACTACGCCG
ACGCCGCAACGTTCCGGCAACGCCTGCAGCGCGATACCGAGCGCAAGGCC
GCGGTGCTGGAGCGGATCAAGGCCACGCCCTGA
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