mRNA_P-wetherbeei_contig20613.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A3N5KVJ7_9GAMM (ABC transporter permease subunit n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5KVJ7_9GAMM) HSP 1 Score: 331 bits (848), Expect = 9.480e-112 Identity = 168/234 (71.79%), Postives = 200/234 (85.47%), Query Frame = 1
Query: 1 VKRGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
+ +WF G L+ G FLY+PI SL++YSFNES+LVTVW GFSTKWY AL++N+QIL AA+LSLK+ A++A +A LGTLA + L RFGPFRGR L +GL TAPLVMPEVITGLSLLLLFV +EQ IGWPAGRG TIV+AH TF MA+VTVVVQSRL +D S+EEAA DLGARPAKVF ++TLPIIAPAL+SGWLLAFTLSLDDLV+SSFV+GPG++TLPMV++SKVRLG+
Sbjct: 1 MNERSWFRIGVLVLGFLFLYVPIVSLVVYSFNESRLVTVWGGFSTKWYAALMQNEQILGAAWLSLKVAALSATIAVALGTLAGMVLARFGPFRGRTLLSGLTTAPLVMPEVITGLSLLLLFVTMEQLIGWPAGRGMTTIVLAHITFTMAFVTVVVQSRLAQIDESLEEAAQDLGARPAKVFFLVTLPIIAPALLSGWLLAFTLSLDDLVISSFVAGPGSTTLPMVVFSKVRLGV 234
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: B6IMW4_RHOCS (Putrescine transport system permease protein PotI n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IMW4_RHOCS) HSP 1 Score: 328 bits (840), Expect = 1.040e-110 Identity = 168/230 (73.04%), Postives = 201/230 (87.39%), Query Frame = 1
Query: 13 NWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
+WFLRG L GL FLY PI LI YSFN+++LVTVW+GFS +WYG L++N Q+L+AA+LSL+I ITAC A VLGT+A L + RFGPFRGRALF G+++APLVMPEVI GLSLLLLFV+LEQ IGWPAGRGT TIVIAH TF M++V VV+QSRLV +D S+EEAAMDLGARPAKVF VITLPIIAP++V+GWLLAFTLSLDDLV++SFVSGPG++TLPMV++S VRLG+
Sbjct: 4 SWFLRGALAVGLIFLYGPILLLIAYSFNDNRLVTVWSGFSFRWYGELMQNAQLLEAAWLSLRIAFITACGAVVLGTMAGLLMARFGPFRGRALFGGMISAPLVMPEVIMGLSLLLLFVSLEQLIGWPAGRGTTTIVIAHITFTMSFVAVVIQSRLVSLDASLEEAAMDLGARPAKVFFVITLPIIAPSVVAGWLLAFTLSLDDLVIASFVSGPGSTTLPMVVFSSVRLGV 233
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A0S8FGR8_9GAMM (Spermidine/putrescine ABC transporter permease n=2 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FGR8_9GAMM) HSP 1 Score: 328 bits (840), Expect = 1.110e-110 Identity = 171/234 (73.08%), Postives = 200/234 (85.47%), Query Frame = 1
Query: 1 VKRGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
+KR + FL ++ G AFLY+PI SLI+YSFN+SKLVTVWAGFST+WYGALL+N QIL AA++SL+I + A +A LGT+A L RF FRGR LFTG+VTAPLVMPEVITGLSLLLLFVA+E AIGWP+GRG TI IAH TF+MAYV V+VQSRL MD SIEEAA+DLGARP K+F +ITLPIIAPALV+GWLLAFTLSLDDLV++SFVSGPG+STLPMVI+SKVRLG+
Sbjct: 1 MKRRSLFLFSAMVFGFAFLYIPIVSLIVYSFNKSKLVTVWAGFSTQWYGALLENDQILQAAWISLRIATLNATVAVALGTIAGFVLARFRRFRGRTLFTGMVTAPLVMPEVITGLSLLLLFVAMEAAIGWPSGRGFTTITIAHITFSMAYVAVIVQSRLSDMDESIEEAALDLGARPLKIFFLITLPIIAPALVAGWLLAFTLSLDDLVIASFVSGPGSSTLPMVIFSKVRLGV 234
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: UPI00115D8E15 (ABC transporter permease subunit n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115D8E15) HSP 1 Score: 328 bits (840), Expect = 1.190e-110 Identity = 172/233 (73.82%), Postives = 201/233 (86.27%), Query Frame = 1
Query: 4 KRGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
+R W L ++G AFLY PI SLI+YSFNES+LVTVW GFSTKWYG LL+NQ++LDAA+LSLKI A+TA A VLGTLAAL L RFG FRGR LF+G+VTAPLVMPEVITGL+LLLLFVALEQ +GWP+GR TIV+AH TF MA+VTVVVQSRL MD SIEEAAMDLGARP KVF+VITLP+IAP+L++ WLLAFTLSLDDLV++SFVSGPG++TLPMV++S VRLG+
Sbjct: 5 RRSVWLLTAMILG-YAFLYGPILSLIVYSFNESRLVTVWGGFSTKWYGELLQNQKLLDAAFLSLKIAALTATGAVVLGTLAALVLVRFGRFRGRTLFSGMVTAPLVMPEVITGLALLLLFVALEQLVGWPSGRSMTTIVLAHVTFTMAFVTVVVQSRLAQMDRSIEEAAMDLGARPFKVFMVITLPMIAPSLIAAWLLAFTLSLDDLVIASFVSGPGSTTLPMVVFSSVRLGV 236
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: UPI000E5D28E5 (ABC transporter permease subunit n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D28E5) HSP 1 Score: 327 bits (837), Expect = 3.280e-110 Identity = 172/234 (73.50%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 1 VKRGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
++R + FL + G AFLY PI SLI+YSFNES+LVTVW GFSTKWYG LL+++Q+L+AA LSL+IG +TA A +LGTLA L L RFG FRGR LF+G+V+APLVMPEVITGLSLLLLFV+ E+ IGWP+GRG TI IAH TF MAYV V+VQSRL +D S+EEAAMDLGARPAKVFLVITLPIIAPAL+SGWLLAFTLSLDDLV++SFVSGPG+STLPMVI+SKVRLG+
Sbjct: 1 MRRRSTFLLMAMCFGFAFLYGPILSLIVYSFNESRLVTVWGGFSTKWYGELLRDEQVLEAALLSLQIGVVTATAAVLLGTLAGLLLARFGRFRGRLLFSGMVSAPLVMPEVITGLSLLLLFVSAEELIGWPSGRGMDTITIAHITFCMAYVAVIVQSRLSSLDDSVEEAAMDLGARPAKVFLVITLPIIAPALISGWLLAFTLSLDDLVIASFVSGPGSSTLPMVIFSKVRLGV 234
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A2W5NCI4_RHOSU (Putrescine ABC transporter permease PotI n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2W5NCI4_RHOSU) HSP 1 Score: 325 bits (834), Expect = 6.010e-110 Identity = 167/227 (73.57%), Postives = 196/227 (86.34%), Query Frame = 1
Query: 22 LRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
L G+++ G FLY PIASLII+SFNESKLVTVW GFSTKWYG LL+N QIL AA++SLK+ +A LAT+ GTLAA LTRFGPF+GRAL TG+ TAPLVMP+VITGLSLLLLFV++EQ IGWPAGRG TI+IAH TF MAYVTVV QSR +D S+EEAAMDLGA+P +VF +T+P+IAPAL++GWLLAFTLSLDDLVV+SFV+GPGASTLPMVI+SKVRLG+
Sbjct: 7 LPGFVLLGFIFLYAPIASLIIFSFNESKLVTVWGGFSTKWYGELLRNPQILSAAWISLKVAVASATLATIFGTLAAFVLTRFGPFKGRALLTGMSTAPLVMPDVITGLSLLLLFVSMEQLIGWPAGRGMTTIIIAHTTFCMAYVTVVAQSRFATLDESLEEAAMDLGAKPVRVFFDVTVPVIAPALIAGWLLAFTLSLDDLVVASFVTGPGASTLPMVIFSKVRLGV 233
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: UPI0015D495B8 (ABC transporter permease subunit n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D495B8) HSP 1 Score: 326 bits (835), Expect = 6.380e-110 Identity = 171/226 (75.66%), Postives = 195/226 (86.28%), Query Frame = 1
Query: 28 GWLIG-GLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
GW + G AFLY+PI L++YSFNE++LVTVW+GFSTKWYG LL+N Q+LDAAYLSLK+ AI+A A VLGTLA L L RFG FRGR LF G++TAPLVMPEVITGLSLLLLFVALE +GWP GRG TI IAH TFAMAYV V+VQSRL MD S+EEAAMDLGARPAKVF VITLPII+PA+VSGWLLAFTLSLDDLV++SFVSGPG++TLPMVI+S VRLG+
Sbjct: 9 GWALWFGYAFLYVPIFLLMLYSFNENRLVTVWSGFSTKWYGELLENTQLLDAAYLSLKVAAISASFAVVLGTLAGLALARFGRFRGRMLFGGMITAPLVMPEVITGLSLLLLFVALEGLVGWPDGRGVTTITIAHTTFAMAYVAVIVQSRLSSMDDSLEEAAMDLGARPAKVFFVITLPIISPAIVSGWLLAFTLSLDDLVIASFVSGPGSTTLPMVIFSSVRLGV 234
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A523KI16_9GAMM (ABC transporter permease subunit n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KI16_9GAMM) HSP 1 Score: 324 bits (831), Expect = 2.770e-109 Identity = 173/232 (74.57%), Postives = 195/232 (84.05%), Query Frame = 1
Query: 7 RGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
+ ++FL L G AFLY+PI SLI+YSFN SKLVTVWAGFSTKWYGALL+N+QIL AA+LS++I + A A LGTLA L RFG FRGR TG+VTAPLVMPEVITGLSLLL+FVALE IGWP+GRG TI IAH TF+MAYV VV+QSRL MD SIEEAA+DLGARP KVF VITLPIIAPALVSGWLLAFTLSLDDLV++SFVSGPG+STLPMVI+SKVRLG+
Sbjct: 4 KRSYFLITALAFGFAFLYVPILSLIVYSFNASKLVTVWAGFSTKWYGALLQNEQILQAAWLSVRIAFVNASFALCLGTLAGFVLARFGRFRGRFALTGMVTAPLVMPEVITGLSLLLMFVALENIIGWPSGRGVTTITIAHITFSMAYVAVVIQSRLSSMDESIEEAALDLGARPTKVFFVITLPIIAPALVSGWLLAFTLSLDDLVIASFVSGPGSSTLPMVIFSKVRLGV 235
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A2A5F5M5_9RHOB (Putrescine ABC transporter permease PotI n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2A5F5M5_9RHOB) HSP 1 Score: 322 bits (824), Expect = 1.920e-108 Identity = 168/220 (76.36%), Postives = 192/220 (87.27%), Query Frame = 1
Query: 43 GLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
G FLY+PI SL+I+SFN+SKLVTVW G+STKWYG LL + QIL AA++SLKIG ++A LATVLGT+AA+ LTRFG RGR L TG+VTAPLVMPEVITGLSLLLLFVA+E GWPAGRG LTI+IAH TF MAYV VVVQSRLV MD SIEEAA DLGA+P +VF ITLP+IAPAL+SGWLL+FTLSLDDLV++SFVSGPGASTLPMVI+SKVRLG+
Sbjct: 14 GFLFLYIPIVSLVIFSFNKSKLVTVWGGWSTKWYGELLNDPQILGAAWISLKIGFVSATLATVLGTIAAMVLTRFGRVRGRGLLTGMVTAPLVMPEVITGLSLLLLFVAMEATFGWPAGRGMLTIIIAHTTFCMAYVAVVVQSRLVDMDDSIEEAASDLGAKPMRVFFDITLPMIAPALISGWLLSFTLSLDDLVIASFVSGPGASTLPMVIFSKVRLGV 233
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Match: A0A521W899_9GAMM (ABC transporter permease subunit n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521W899_9GAMM) HSP 1 Score: 322 bits (825), Expect = 2.260e-108 Identity = 170/232 (73.28%), Postives = 196/232 (84.48%), Query Frame = 1
Query: 7 RGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGALLKNQQILDAAYLSLKIGAITACLATVLGTLAALCLTRFGPFRGRALFTGLVTAPLVMPEVITGLSLLLLFVALEQAIGWPAGRGTLTIVIAHATFAMAYVTVVVQSRLVGMDPSIEEAAMDLGARPAKVFLVITLPIIAPALVSGWLLAFTLSLDDLVVSSFVSGPGASTLPMVIYSKVRLGL 702
R + F+ + G AFLY+PI S+I+YSFNES+LVTVW GFST+WY ALL N+Q+L AA LSLKI AI A AT+LGTLA L L RFG FRGRAL TG+VTAPLVMPEVITGLSLLLLFVALEQ IGWPAGRG TI IAH TF+MAYV VV+QSRL +D S+EEAAMDLGARP KVF VITLPI+ PA+++GWLLAFTLS DDLV+SSFVSGPG+STLP+V++SKVRLG+
Sbjct: 4 RRSVFVVSMMAFGFAFLYVPILSMIVYSFNESRLVTVWGGFSTRWYAALLHNEQLLGAAQLSLKIAAINATGATLLGTLAGLALARFGRFRGRALLTGMVTAPLVMPEVITGLSLLLLFVALEQVIGWPAGRGITTITIAHVTFSMAYVAVVMQSRLATLDESLEEAAMDLGARPLKVFFVITLPIVLPAILAGWLLAFTLSWDDLVISSFVSGPGSSTLPIVVFSKVRLGV 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20613.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20613.1.1 >prot_P-wetherbeei_contig20613.1.1 ID=prot_P-wetherbeei_contig20613.1.1|Name=mRNA_P-wetherbeei_contig20613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp VKRGNWFLRGWLIGGLAFLYLPIASLIIYSFNESKLVTVWAGFSTKWYGAback to top mRNA from alignment at P-wetherbeei_contig20613:1..702- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20613.1.1 ID=mRNA_P-wetherbeei_contig20613.1.1|Name=mRNA_P-wetherbeei_contig20613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig20613:1..702- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20613:1..702- >mRNA_P-wetherbeei_contig20613.1.1 ID=mRNA_P-wetherbeei_contig20613.1.1|Name=mRNA_P-wetherbeei_contig20613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig20613:1..702- (Phaeothamnion wetherbeei SAG_119_79)back to top |