mRNA_P-wetherbeei_contig2061.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2061.3.1
Unique NamemRNA_P-wetherbeei_contig2061.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A0K6S852_9ALVE (Kinesin motor domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S852_9ALVE)

HSP 1 Score: 124 bits (310), Expect = 9.850e-31
Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  220 VQEEGVMVLVRFRPLNEREKEGEG--WIEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTM--EGLPSDPGLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            ++E  V+V VR RPLNE+EK       ++V        +   G+ K    K F FD V+     QQ +FD +A P++ K LQG+N  +FA+GQTGSGKT TM  EG   + G+IP LCDELF QVE+R++   F ++   +EIYNE++NDLL
Sbjct:   79 IEENSVLVAVRVRPLNEKEKSSRSPSCVDVTSP---TSISLSGSSK----KEFNFDCVMREDTTQQEVFDRSARPLLHKVLQGYNGCLFAYGQTGSGKTWTMLGEGKAENKGIIPNLCDELFEQVEARKDRQTFTVQCGMLEIYNENLNDLL 223          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A0K6S8E0_9ALVE (Kinesin motor domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8E0_9ALVE)

HSP 1 Score: 124 bits (310), Expect = 8.910e-30
Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  220 VQEEGVMVLVRFRPLNEREKEGEG--WIEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTM--EGLPSDPGLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            ++E  V+V VR RPLNE+EK       ++V        +   G+ K    K F FD V+     QQ +FD +A P++ K LQG+N  +FA+GQTGSGKT TM  EG   + G+IP LCDELF QVE+R++   F ++   +EIYNE++NDLL
Sbjct:   79 IEENSVLVAVRVRPLNEKEKSSRSPSCVDVTSP---TSISLSGSSK----KEFNFDCVMREDTTQQEVFDRSARPLLHKVLQGYNGCLFAYGQTGSGKTWTMLGEGKAENKGIIPNLCDELFEQVEARKDRQTFTVQCGMLEIYNENLNDLL 223          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A1B6KYM7_9HEMI (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KYM7_9HEMI)

HSP 1 Score: 120 bits (300), Expect = 1.060e-29
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  217 PVQEEGVMVLVRFRPLNEREKEGEGWI---EVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDP---GLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLLD 666
            PV+ E V V+VR RP+NE+E+  +G I   +V   R  V +      K+++ K FAFDAV   +C QQ I+D    P+V+  L GFN T+FA+GQTG+GKT+TMEG  +D    G+IP+  D++F  + SR     + +RASY+EIY + I DLLD
Sbjct:    9 PVKNEKVQVVVRCRPMNEKER-SKGHISVVKVYPSRGVVEIYDPKYDKLDQCKMFAFDAVYDWNCTQQEIYDETVRPLVNAVLNGFNGTIFAYGQTGTGKTYTMEGNKTDEYAKGIIPKTFDQIFDHI-SRSHNMQYLVRASYLEIYQDEIRDLLD 162          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: B8BVJ3_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVJ3_THAPS)

HSP 1 Score: 122 bits (305), Expect = 2.010e-28
Identity = 68/153 (44.44%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  217 PVQEEGVMVLVRFRPLNEREKE-GEGWIEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGL--PSD-PGLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            P + E + V+ R RPLN +EK+ G G   V  E   V  +    G ++ TKTF FDAV      Q+ I+D+ A P+V   L+GFN T+F +GQTG+GKTHTMEGL  PS+  G+IP   + +F  +        + +RASY EIYNE I DLL
Sbjct:    2 PKKSEAIKVVFRVRPLNSKEKQVGRGIATVAHEDKGVIEISSPDGGLDSTKTFTFDAVFSQKSSQRHIYDVCAAPVVQSVLEGFNGTVFCYGQTGAGKTHTMEGLNEPSELKGIIPNTFEHIFDHIALNGSKDKYLVRASYFEIYNEEIKDLL 154          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A4Z1T9H9_GIAMU (Kinesin-like protein n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1T9H9_GIAMU)

HSP 1 Score: 120 bits (301), Expect = 8.190e-28
Identity = 72/151 (47.68%), Postives = 94/151 (62.25%), Query Frame = 1
Query:  223 QEEGVMVLVRFRPLNEREK-EGEGWI-EVNGERNEVRVLK--GGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDPGLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            Q + V VLVR RP NEREK EG   I E++  R  V + K  G T +    ++F FDAV PP+  Q  +FD +   ++   L+G+NAT+FA+GQTGSGKTHTM G P +PG+IP     +F  +     T  F +RAS+IEIYNE I DLL
Sbjct:    6 QTDNVRVLVRMRPFNEREKTEGAREIVEMDKTRCTVTLHKPPGLTSEGVSKRSFTFDAVYPPTSTQTEVFDESVREMIDGCLEGYNATVFAYGQTGSGKTHTMMGQPENPGMIPLAFQRIFDFIAKADSTTQFLVRASFIEIYNEDIKDLL 156          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A1B6HBU1_9HEMI (Kinesin-like protein (Fragment) n=4 Tax=Homalodisca TaxID=139475 RepID=A0A1B6HBU1_9HEMI)

HSP 1 Score: 120 bits (300), Expect = 1.210e-27
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  217 PVQEEGVMVLVRFRPLNEREKEGEGW---IEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDP---GLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLLD 666
            PV+ E V V+VR RP+NE+EK  +G    ++V   R  V +      K+++ K FAFDAV   +C QQ I+D    P+V+  L GFN T+FA+GQTG+GKT+TMEG  +D    G+IP+  D++F  + SR     + +RASY+EIY + I DLLD
Sbjct:   27 PVKNEKVQVVVRCRPMNEKEK-SKGHLSVVKVYPTRGVVEIYDPKYEKLDQCKMFAFDAVYDWNCTQQEIYDETVRPLVNAVLNGFNGTIFAYGQTGTGKTYTMEGNKTDENAKGIIPKTFDQIFDHI-SRSHNMQYLVRASYLEIYQDEIRDLLD 180          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A7S2K100_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K100_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.520e-27
Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  229 EGVMVLVRFRPLNEREKEG--EGWIEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDP---GLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            E + V+VR RPLN +E +   E     + +R  + V          +KTF FDAV      Q+ I+D+ A P+V   L+G+N T+FA+GQTG+GKTHTMEG    P   G+IP     +F  V        + +RASY EIYNE I DLL
Sbjct:    9 ECIKVVVRIRPLNSKEIQSGHEVTTVAHEDRGVIEVRNPSADASEPSKTFTFDAVFSDKATQRSIYDVCAAPVVQSVLEGYNGTVFAYGQTGAGKTHTMEGCADSPELRGIIPNAIQHIFDHVSLETANEKYLVRASYFEIYNEEIRDLL 158          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A226DHG6_FOLCA (Kinesin-like protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DHG6_FOLCA)

HSP 1 Score: 118 bits (295), Expect = 7.070e-27
Identity = 70/152 (46.05%), Postives = 99/152 (65.13%), Query Frame = 1
Query:  229 EGVMVLVRFRPLNEREK-EG-EGWIEVNGERNEVRV--LKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGL---PSDPGLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLL 663
            E V V++R RPL+E+E+ EG E  ++V+ +RNEV V  LK   G ++E+K F FDAV      Q  ++++A  P+V   LQGFN T+FA+GQTG+GKT+TMEG+    S+ G+IP     +F  V +   T  + +RASY+EIY E I DLL
Sbjct:  160 ERVKVVIRSRPLSEKEETEGHESVVQVHPDRNEVEVRRLKSNAGDISESKVFVFDAVFDARTSQLDLYNIAFAPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVREKESEHGVIPNTFRHIFAHV-AENSTKQYLIRASYLEIYQEDIRDLL 310          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: UPI000C75F86F (kinesin-like protein KIF13A n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75F86F)

HSP 1 Score: 118 bits (295), Expect = 7.550e-27
Identity = 72/162 (44.44%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  214 PPVQEEGVMVLVRFRPLNEREKEGE---GWIEVNGERNEVRVLKGGTG---KMNETKTFAFDAVLPPS---CGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDPGLIPRLCDELFRQVESR--RETHIFRMRASYIEIYNEHINDLLD 666
            P    E V V VR RP+N REK+       +E+NG  N+  +LK G G   K N +  F FD+  P S     Q+ ++      I+  A +G+NA +FA+GQTGSGK++TM G  +DPG+IPRLC  LF + E +  RET I R+  SY+EIYNE + DLLD
Sbjct:    3 PGTSSENVKVAVRVRPINTREKDSSRSRSVVEING--NQASLLKLGKGERKKRNFSFDFCFDSTDPNSEQFASQETVYSALGQDILDNAFKGYNACLFAYGQTGSGKSYTMTGSRTDPGIIPRLCSNLFLETEKQVGRETEI-RVEVSYMEIYNEKVFDLLD 161          
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Match: A0A6P8YAZ3_THRPL (Kinesin-like protein n=3 Tax=Thripinae TaxID=153976 RepID=A0A6P8YAZ3_THRPL)

HSP 1 Score: 117 bits (294), Expect = 9.180e-27
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 1
Query:  217 PVQEEGVMVLVRFRPLNERE-KEG-EGWIEVNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSKALQGFNATMFAFGQTGSGKTHTMEGLPSDP---GLIPRLCDELFRQVESRRETHIFRMRASYIEIYNEHINDLLD 666
            PV++E V V+VR RP+N+RE +EG E  +++   R  V +           KTF FDAV   +  QQ ++D    P+VS  L GFN T+FA+GQTG+GKT+TMEG  S+P   G+IP+  D++F  + +R+    + +RASY+EIY E I DLLD
Sbjct:   27 PVKKESVQVVVRCRPMNDRETREGHERVVDMFPTRGVVEIRNPREESRESIKTFTFDAVYDWTSKQQDLYDETIRPLVSSVLDGFNGTIFAYGQTGTGKTYTMEGCKSEPDSKGIIPKSFDQIFSHI-ARQVNMQYLVRASYLEIYQEEIRDLLD 180          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2061.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K6S852_9ALVE9.850e-3144.74Kinesin motor domain-containing protein n=1 Tax=Ch... [more]
A0A0K6S8E0_9ALVE8.910e-3044.74Kinesin motor domain-containing protein n=1 Tax=Ch... [more]
A0A1B6KYM7_9HEMI1.060e-2944.87Kinesin motor domain-containing protein (Fragment)... [more]
B8BVJ3_THAPS2.010e-2844.44Kinesin-like protein (Fragment) n=1 Tax=Thalassios... [more]
A0A4Z1T9H9_GIAMU8.190e-2847.68Kinesin-like protein n=1 Tax=Giardia muris TaxID=5... [more]
A0A1B6HBU1_9HEMI1.210e-2744.87Kinesin-like protein (Fragment) n=4 Tax=Homalodisc... [more]
A0A7S2K100_9STRA1.520e-2741.33Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A226DHG6_FOLCA7.070e-2746.05Kinesin-like protein n=1 Tax=Folsomia candida TaxI... [more]
UPI000C75F86F7.550e-2744.44kinesin-like protein KIF13A n=1 Tax=Eurytemora aff... [more]
A0A6P8YAZ3_THRPL9.180e-2744.52Kinesin-like protein n=3 Tax=Thripinae TaxID=15397... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2061contigP-wetherbeei_contig2061:1674..2345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps32329
PFAMsKinesin
Model size672
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categorymitochondrion
Exons1
Evalue3.29e-29
EggNOG OGsCOG5059@1|root,KOG4280@2759|Eukaryota,2XFI5@2836|Bacillariophyta
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-23_004020.1
DescriptionMicrotubule binding
Cds size672
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.5094624-CDS-P-wetherbeei_contig2061:1673..23451683186204.5094624-CDS-P-wetherbeei_contig2061:1673..2345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2061 1674..2345 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2061.3.1prot_P-wetherbeei_contig2061.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2061 1674..2345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2061.3.1

>prot_P-wetherbeei_contig2061.3.1 ID=prot_P-wetherbeei_contig2061.3.1|Name=mRNA_P-wetherbeei_contig2061.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
RNLKRQRVLFVRVSARHSPRRSIKMGCASSKGKVSALQPCIACKEREIAS
AAPKEATATGAQLSEEETLLLPPVQEEGVMVLVRFRPLNEREKEGEGWIE
VNGERNEVRVLKGGTGKMNETKTFAFDAVLPPSCGQQRIFDLAAPPIVSK
ALQGFNATMFAFGQTGSGKTHTMEGLPSDPGLIPRLCDELFRQVESRRET
HIFRMRASYIEIYNEHINDLLDGR
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mRNA from alignment at P-wetherbeei_contig2061:1674..2345+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2061.3.1 ID=mRNA_P-wetherbeei_contig2061.3.1|Name=mRNA_P-wetherbeei_contig2061.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:1674..2345+ (Phaeothamnion wetherbeei SAG_119_79)
CGAAATCTGAAACGGCAAAGGGTCCTCTTTGTTCGGGTGTCGGCGCGCCA TTCACCACGCAGATCCATCAAAATGGGCTGCGCCTCGAGCAAAGGAAAAG TTTCGGCCCTCCAACCGTGCATAGCATGCAAGGAGCGCGAGATCGCATCC GCAGCCCCTAAGGAGGCGACAGCTACTGGTGCACAGCTGTCAGAAGAGGA AACGCTCCTTCTCCCACCCGTGCAGGAGGAAGGGGTCATGGTCCTCGTCC GGTTCCGACCCTTGAACGAACGAGAAAAGGAAGGCGAAGGCTGGATCGAA GTCAACGGGGAGCGAAACGAGGTCCGTGTCCTCAAGGGAGGCACCGGCAA GATGAACGAGACCAAGACCTTCGCCTTCGACGCGGTGCTGCCGCCGAGCT GCGGCCAGCAGCGCATCTTCGACCTCGCGGCGCCGCCCATCGTCAGCAAG GCCCTGCAGGGCTTCAACGCCACTATGTTCGCCTTCGGACAGACTGGTAG CGGCAAGACGCACACGATGGAGGGGTTACCGTCGGACCCGGGACTCATTC CGCGCCTCTGCGACGAGCTATTTCGGCAGGTGGAAAGCCGTCGGGAGACT CACATCTTCCGCATGCGAGCCTCATACATCGAAATCTATAACGAGCACAT CAACGATCTGCTCGACGGCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2061:1674..2345+

>mRNA_P-wetherbeei_contig2061.3.1 ID=mRNA_P-wetherbeei_contig2061.3.1|Name=mRNA_P-wetherbeei_contig2061.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:1674..2345+ (Phaeothamnion wetherbeei SAG_119_79)
CGAAATCTGAAACGGCAAAGGGTCCTCTTTGTTCGGGTGTCGGCGCGCCA
TTCACCACGCAGATCCATCAAAATGGGCTGCGCCTCGAGCAAAGGAAAAG
TTTCGGCCCTCCAACCGTGCATAGCATGCAAGGAGCGCGAGATCGCATCC
GCAGCCCCTAAGGAGGCGACAGCTACTGGTGCACAGCTGTCAGAAGAGGA
AACGCTCCTTCTCCCACCCGTGCAGGAGGAAGGGGTCATGGTCCTCGTCC
GGTTCCGACCCTTGAACGAACGAGAAAAGGAAGGCGAAGGCTGGATCGAA
GTCAACGGGGAGCGAAACGAGGTCCGTGTCCTCAAGGGAGGCACCGGCAA
GATGAACGAGACCAAGACCTTCGCCTTCGACGCGGTGCTGCCGCCGAGCT
GCGGCCAGCAGCGCATCTTCGACCTCGCGGCGCCGCCCATCGTCAGCAAG
GCCCTGCAGGGCTTCAACGCCACTATGTTCGCCTTCGGACAGACTGGTAG
CGGCAAGACGCACACGATGGAGGGGTTACCGTCGGACCCGGGACTCATTC
CGCGCCTCTGCGACGAGCTATTTCGGCAGGTGGAAAGCCGTCGGGAGACT
CACATCTTCCGCATGCGAGCCTCATACATCGAAATCTATAACGAGCACAT
CAACGATCTGCTCGACGGCCGC
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